G72087



Basic Information


Item Value
gene id G72087
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 5006622 ~ 5008697 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU82230
TGTGTGGCTGGGGCGTCTGGGGCTGTCCTGGGTTTCGTGGGTAGTTGAGTTCATTGTGCTCATAGTACCTGTAGCTCTCATTAAAGTGGTCTGGTCTGTGGGCTCGTCTGGGTTGGTTATTGTAGTACGGCTCTGGAGGGTAGTAATAAGGGCCGCCATCTCCATTCTCTGTCACCGAACCAGCATCGCTGATGTAGGATGGCGAGGAAGGGGAGTAATCGCGATGAAGGTGCGGTGGGGCAGACAGCCGATGACTCTCCCTGCGGGAAATTTCGAGGGCGGTCCTTGGAGGTGCGTTGCGCAGGAAACTCTTAGGGCCGCTAACGTCCCCAACAGAACCAGAGGAATACGGACCTGCACCAGACACCCCGGCCGGAACCGGCTCCACTAACGGGGGCTCACGCCGAAGAAATGTTGGATGCCGGATAAACGAGGGCATTAAATCTGAGAACAAACTTCTTAGAAGCGGGGAAGTTTCTTTCTTCACATATTTGCCCTGAACTTCGGCTGGCTTGGACGCTTCGTTTTTACTCTTCTTTCTGGAGAGCATCGTTAATCCGAATCGATTCTGGACCAATTAGACTTCGGTTTCATCCTGAAATCCGGATCGAGATTCGCACTGACACGCAGAACCGAGACCATTTCGGAGTGTAGCCCGATAGCTAATTTCGAGTCATCATGGCTACAGTCTGAAAACATCAACACAAAACAAATGAGTTTGCATTTAGCGAACGTTTCGTTGTTTTCAGTATTCAGTCGAACATTACGAATATTTTTCGACGGCTAATTAGCGCTCCCCGCGCGCGCTGTCCATATTACGCCCAGGGAAAAGTGCACGAAAACTTTTACCAGCTGAATGTGTCCACCCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU82230 True 869 lncRNA 0.51 2 5006622 5008697

Neighbor


gene id symbol gene type direction distance location
CI01000012_04926292_04930302 TMX1 coding downstream 76148 4925496 ~ 4930474 (-)
CI01000012_04879477_04890031 FRMD6 coding downstream 116591 4879440 ~ 4890031 (-)
CI01000012_04839741_04854323 NA coding downstream 151623 4839475 ~ 4854999 (-)
CI01000012_04706769_04709074 GPHB5 coding downstream 297548 4706701 ~ 4709074 (-)
CI01000012_04404769_04419096 PHF3 coding downstream 587526 4404326 ~ 4419096 (-)
CI01000012_05022143_05030697 ATL1 coding upstream 13046 5021743 ~ 5030697 (-)
CI01000012_05079456_05083333 ATP5S coding upstream 70550 5079247 ~ 5083333 (-)
CI01000012_05091184_05092014 NA coding upstream 82324 5091021 ~ 5092014 (-)
CI01000012_05112839_05116264 NA coding upstream 102708 5111405 ~ 5116264 (-)
CI01000012_05118797_05123143 NA coding upstream 109635 5118332 ~ 5123143 (-)
G72078 NA non-coding downstream 29696 4966750 ~ 4976926 (-)
G72099 NA non-coding downstream 40272 4958706 ~ 4966350 (-)
G72141 NA non-coding downstream 89953 4916436 ~ 4916669 (-)
G72139 NA non-coding downstream 93435 4912904 ~ 4913187 (-)
G72135 NA non-coding downstream 99283 4906898 ~ 4907339 (-)
G72174 NA non-coding upstream 59065 5067762 ~ 5068870 (-)
G72114 NA non-coding upstream 158825 5167522 ~ 5168375 (-)
G72111 NA non-coding upstream 165424 5174121 ~ 5174733 (-)
G72073 NA non-coding upstream 168885 5177582 ~ 5181057 (-)
G72208 NA non-coding upstream 224667 5233364 ~ 5234207 (-)
G72068 NA other downstream 226490 4776220 ~ 4780132 (-)
G71898 NA other downstream 471950 4533530 ~ 4534672 (-)
G70774 NA other downstream 2139730 2866508 ~ 2866892 (-)
G69562 NA other downstream 3630324 1332075 ~ 1376298 (-)
CI01000012_01139864_01192154 TTC7A other downstream 3855424 1135676 ~ 1192154 (-)
G72204 NA other upstream 285076 5293773 ~ 5302206 (-)
CI01000012_05414096_05416676 TTC9 other upstream 354945 5413369 ~ 5416780 (-)
G72294 NA other upstream 454143 5462840 ~ 5465857 (-)
G72629 NA other upstream 1138314 6147011 ~ 6147494 (-)
CI01000012_07356934_07358497 NA other upstream 2346555 7356863 ~ 7358612 (-)

Expression



Co-expression Network