G191025


Basic Information

Item Value
gene id G191025
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 18502502 ~ 18505375 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU259003
CTCAGCTCATTCCTACCAGTTTAATCTGATCTGAAAGTTTAGACTGAAGTCgtaattactgtattattattattctcctgTATCGTCCTGTAGAGAGTGCTCCCTGTCCCGCGGGCTTCAGGCCATATTCTCCAAGGCAATTAAACACTTTCATTATTTACCCGCGGGACGTTTCACACACCGCGCAAACTGTTAATGACCACtaaagagacaaaacaacaccaTTACAGAACCACAGGAGACGAGCCCGGAGTCCGTTCACCATCTGCTCACAAATTACAGACCAGGAGTTCACTCTGAATTTACATAaataactaaacacacacagacaggagGTGATGAGTTcagttcctaataaaaataacagaatttATTCGAGAGTAAAGGCTGTGGAGTATATTAGCATTAAGCATTGTCACAATAGTCACATTATTACACAGGACCTACAGTGTAGGGCCTTGTGATTTTCACCATAACACCACACTATACGGACAGAATCgtaaaactgagaaaaataacGAATCTGGATCAGAATGAAGAATTTCTGGGTGCCAAGTGGTCTATGATCggaagattgctggttcgaatacCAGTcctgcagcttgccatcagctgccagagccctgagagcgCACAAttagtcttgctctctctgggtgggtacagtagatggtgctctctcatcactcctagggtgatgtggatcagcaacggctgcgtctgtgagctgatgtatcagaaccgggTCGCTgagaaagaggcggagtcttacttcacatgtgttggaggagCTGCTTCTTCACCTTCAtgttggtggtgatgatgatgatggggcTGATGGCGGCGAAGAGCATGGAAAAGAAGATCCTCAGATCGCTGATTAGAGCAGAGGACAGCGTCTGCTTGACCGTCAGTGTGTAAACCCACAGCCCGTTATCCACGCCGTACATCAGCACGTAGAACGTCACCAGCACTACCACAGAAATGGCCGCCCGGCGCTCGGCtgaagctccgccccctccGGTTCCCGCGCCGCTGCGGAGATTGGAGACCTGCCGGCTGTGGCGGTAGAGGAAGACGAGGATAATGAAGCTGGCGGTGGTCATCAGAGACATGGGGATAACGTCCCGGACCACCTGCAACGCACCGTTAGCGTCTTTAGCGAAGACGGAGGGGAAGTTGATGAAGCAGAACTGGATGTTGATGCTGTTCTCCAGCAGCTTGGAGTCGTTCCTCGCGGCGACGGCGAAGACCAGAGTCGGAGCGCTGGCCGAGGTGTTGATGATCCACAGCAGCAGGAAGATCAGCCACAGATAACGGCCAAACAGCGAGCGGAGCGTCGCCCAGTGAGAGCCAGGGGGCGCTATACTCAAACACTGATAGGAGCTCAGAGTGAAGGTCAGCCAGATAGAGAGCCCACGGAACGTCCTGATCATCCAGAGAtattaatcaataatcaataatccaaATATTATCAATAAACG

Function

NR:

description
uncharacterized protein C11orf74 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259003 True 1484 lncRNA 0.50 2 18502502 18505375

Neighbor

gene id symbol gene type direction distance location
LOC103038294 LOC108444096 coding downstream 11054 18488677 ~ 18491448 (-)
LOC103029431 LOC108254710,LOC108444098,LOC103385834 coding downstream 13925 18483415 ~ 18488577 (-)
LOC103038600 LOC108444099 coding downstream 35450 18456589 ~ 18467052 (-)
nckipsd nckipsd coding downstream 51795 18434535 ~ 18450707 (-)
slc25a20 slc25a20 coding downstream 73743 18417224 ~ 18428759 (-)
cacna2d2 cacna2d2,cacna2d2b,LOC107655410 coding upstream 294554 18799929 ~ 18844551 (-)
acy1 acy1,LOC107575257,LOC107655273 coding upstream 344525 18849900 ~ 18861224 (-)
abhd14a abhd14a,LOC107586929,LOC107756017,LOC107704435,LOC107593054 coding upstream 357190 18862565 ~ 18870053 (-)
LOC103032073 NA coding upstream 366876 18872251 ~ 18893531 (-)
LOC103033109 LOC103033109,LOC108443914 coding upstream 398042 18903417 ~ 18920755 (-)
G191003 NA non-coding downstream 124308 18377640 ~ 18378194 (-)
G190997 NA non-coding downstream 135292 18362081 ~ 18367210 (-)
G190990 NA non-coding downstream 141747 18310476 ~ 18360755 (-)
G190988 NA non-coding downstream 254128 18240094 ~ 18248374 (-)
G190958 NA non-coding downstream 272840 18228990 ~ 18229662 (-)
G191078 NA non-coding upstream 166088 18671463 ~ 18675406 (-)
LOC111195398 NA non-coding upstream 198030 18703405 ~ 18721914 (-)
G191095 NA non-coding upstream 218656 18724031 ~ 18726062 (-)
G191077 NA non-coding upstream 223464 18728839 ~ 18729268 (-)
G191079 NA non-coding upstream 227183 18732558 ~ 18752026 (-)
LOC103041510 LOC108414096 other downstream 187165 18311452 ~ 18315337 (-)
mrpl20 mrpl20 other downstream 288972 18139363 ~ 18213530 (-)
LOC111195395 NA other downstream 326338 18167240 ~ 18176164 (-)
G190788 NA other downstream 1282722 17217321 ~ 17219780 (-)
irf6 irf6,LOC107599105,LOC106565674 other downstream 1308755 17181114 ~ 17193747 (-)
LOC111195399 wu:fd14a01,myhz1.2,LOC108444093,LOC108443910,LOC108444092,LOC108416711,LOC108416675,LOC108416954,LOC108443907,LOC108254798,LOC108261508,LOC107737926,LOC107575389,LOC108416101,LOC107681327,LOC108261437,LOC108254800,LOC106570860,LOC102780693,LOC101068441,LOC108417180,LOC101164155,LOC105899468,LOC107378336,LOC107378334,LOC101071797,LOC105890352,LOC107372732,LOC107093413,LOC108254796 other upstream 202944 18708319 ~ 18798915 (-)
LOC103032794 tusc2,tusc2b,LOC107593101,LOC107587002,LOC107695626 other upstream 392134 18897509 ~ 18902285 (-)
LOC103036492 card19,LOC108443695 other upstream 1005946 19511321 ~ 19528580 (-)
brk1 brk1,BRK1,LOC106565571 other upstream 2593972 21099347 ~ 21103218 (-)
npff npffl,npff,LOC107738884,LOC107677943,LOC107669931 other upstream 2924641 21430016 ~ 21436453 (-)

Expression


Co-expression Network