G191075 (LOC108443907,LOC108271865,LOC108444093,LOC108254800,LOC108443910,LOC108440470)


Basic Information

Item Value
gene id G191075
gene name LOC108443907,LOC108271865,LOC108444093,LOC108254800,LOC108443910,LOC108440470
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 18775652 ~ 18788885 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU259152
TTGCAGGTCGTTTTTCTCCTGAAGGAGTGACACCATCTTCTCTTCAAGCTCTTTTTTCTTGGACAGTGCCTTTGTCAGATCATCCTTCATTTTCTCAAAGTTCTCCTTCATAGCAGCCATTTCTTTCTCAAAGTTCTCCTTCATAGCAGCCATTTCTTTCTCAGTCTCTGCACTCTTCAGCAGAGGCTTGATCTTGAAGTACAGCTTCATCCATGGCCAGTGTTTCACATTCATGAATGAGCGGATGTTGTATTGAATAGTGAAGATGGACTCT

Function

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259152 True 274 lncRNA 0.42 2 18775652 18788885

Neighbor

gene id symbol gene type direction distance location
LOC103038294 LOC108444096 coding downstream 284204 18488677 ~ 18491448 (-)
LOC103029431 LOC108254710,LOC108444098,LOC103385834 coding downstream 287075 18483415 ~ 18488577 (-)
LOC103038600 LOC108444099 coding downstream 308600 18456589 ~ 18467052 (-)
nckipsd nckipsd coding downstream 324945 18434535 ~ 18450707 (-)
slc25a20 slc25a20 coding downstream 346893 18417224 ~ 18428759 (-)
cacna2d2 cacna2d2,cacna2d2b,LOC107655410 coding upstream 11044 18799929 ~ 18844551 (-)
acy1 acy1,LOC107575257,LOC107655273 coding upstream 61015 18849900 ~ 18861224 (-)
abhd14a abhd14a,LOC107586929,LOC107756017,LOC107704435,LOC107593054 coding upstream 73680 18862565 ~ 18870053 (-)
LOC103032073 NA coding upstream 83366 18872251 ~ 18893531 (-)
LOC103033109 LOC103033109,LOC108443914 coding upstream 114532 18903417 ~ 18920755 (-)
G191079 NA non-coding downstream 23626 18732558 ~ 18752026 (-)
G191077 NA non-coding downstream 46384 18728839 ~ 18729268 (-)
G191095 NA non-coding downstream 49590 18724031 ~ 18726062 (-)
LOC111195398 NA non-coding downstream 53738 18703405 ~ 18721914 (-)
G191078 NA non-coding downstream 100246 18671463 ~ 18675406 (-)
G191296 NA non-coding upstream 256521 19045406 ~ 19099824 (-)
G191321 NA non-coding upstream 406042 19194927 ~ 19196386 (-)
G191326 NA non-coding upstream 439849 19228734 ~ 19229174 (-)
G191328 NA non-coding upstream 460319 19249204 ~ 19249453 (-)
G191329 NA non-coding upstream 463991 19252876 ~ 19253089 (-)
LOC103041510 LOC108414096 other downstream 460315 18311452 ~ 18315337 (-)
mrpl20 mrpl20 other downstream 562122 18139363 ~ 18213530 (-)
LOC111195395 NA other downstream 599488 18167240 ~ 18176164 (-)
G190788 NA other downstream 1555872 17217321 ~ 17219780 (-)
irf6 irf6,LOC107599105,LOC106565674 other downstream 1581905 17181114 ~ 17193747 (-)
LOC103032794 tusc2,tusc2b,LOC107593101,LOC107587002,LOC107695626 other upstream 108624 18897509 ~ 18902285 (-)
LOC103036492 card19,LOC108443695 other upstream 722436 19511321 ~ 19528580 (-)
brk1 brk1,BRK1,LOC106565571 other upstream 2310462 21099347 ~ 21103218 (-)
npff npffl,npff,LOC107738884,LOC107677943,LOC107669931 other upstream 2641131 21430016 ~ 21436453 (-)
elmo2 elmo2,LOC106583331 other upstream 2722039 21510924 ~ 21544831 (-)

Expression


Co-expression Network