G191328


Basic Information

Item Value
gene id G191328
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 19249204 ~ 19249453 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU259562
gttagcacccgaacatcccttttagacagcttcctcttacagcgtccacagttaatcctgttggatgtggttggtgcttcttggtggtatgctgacattaccctggataccgtggctcttgatgaatcacaaagacttgctgtcttggtcacagatgctccagcaagacgtgcaccaacaatttgtcctcttttgaactctggtatgtctcccataatgttgtgtgcattgcaatatttagagcagaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259562 True 250 lncRNA 0.46 1 19249204 19249453

Neighbor

gene id symbol gene type direction distance location
LOC103038073 NA coding downstream 9535 19217715 ~ 19239669 (-)
LOC103035880 LOC103035880 coding downstream 35548 19206055 ~ 19213656 (-)
LOC103035575 NA coding downstream 45874 19199678 ~ 19203330 (-)
rad54l2 rad54l2 coding downstream 301811 18927027 ~ 18947393 (-)
LOC103033109 LOC103033109,LOC108443914 coding downstream 328449 18903417 ~ 18920755 (-)
LOC103038392 NA coding upstream 9279 19258732 ~ 19280996 (-)
LOC111195448 NA coding upstream 32650 19282103 ~ 19312759 (-)
LOC103037635 NA coding upstream 66365 19315818 ~ 19346307 (-)
LOC103044861 NA coding upstream 108960 19358413 ~ 19390900 (-)
LOC103044542 NA coding upstream 142340 19391793 ~ 19417508 (-)
G191326 NA non-coding downstream 20030 19228734 ~ 19229174 (-)
G191321 NA non-coding downstream 52818 19194927 ~ 19196386 (-)
G191296 NA non-coding downstream 149380 19045406 ~ 19099824 (-)
G191075 LOC108443907,LOC108271865,LOC108444093,LOC108254800,LOC108443910,LOC108440470 non-coding downstream 460319 18775652 ~ 18788885 (-)
G191074 NA non-coding downstream 471033 18748963 ~ 18778171 (-)
G191329 NA non-coding upstream 3423 19252876 ~ 19253089 (-)
G191339 NA non-coding upstream 78513 19327966 ~ 19328622 (-)
G191337 NA non-coding upstream 168778 19418231 ~ 19428960 (-)
G191338 NA non-coding upstream 283493 19532946 ~ 19562551 (-)
LOC111195401 NA non-coding upstream 360931 19610384 ~ 19618060 (-)
LOC103032794 tusc2,tusc2b,LOC107593101,LOC107587002,LOC107695626 other downstream 346919 18897509 ~ 18902285 (-)
LOC111195399 wu:fd14a01,myhz1.2,LOC108444093,LOC108443910,LOC108444092,LOC108416711,LOC108416675,LOC108416954,LOC108443907,LOC108254798,LOC108261508,LOC107737926,LOC107575389,LOC108416101,LOC107681327,LOC108261437,LOC108254800,LOC106570860,LOC102780693,LOC101068441,LOC108417180,LOC101164155,LOC105899468,LOC107378336,LOC107378334,LOC101071797,LOC105890352,LOC107372732,LOC107093413,LOC108254796 other downstream 450289 18708319 ~ 18798915 (-)
LOC103041510 LOC108414096 other downstream 933867 18311452 ~ 18315337 (-)
mrpl20 mrpl20 other downstream 1035674 18139363 ~ 18213530 (-)
LOC103036492 card19,LOC108443695 other upstream 261868 19511321 ~ 19528580 (-)
brk1 brk1,BRK1,LOC106565571 other upstream 1849894 21099347 ~ 21103218 (-)
npff npffl,npff,LOC107738884,LOC107677943,LOC107669931 other upstream 2180563 21430016 ~ 21436453 (-)
elmo2 elmo2,LOC106583331 other upstream 2261471 21510924 ~ 21544831 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other upstream 2597516 21846969 ~ 21851642 (-)

Expression


Co-expression Network