G191337


Basic Information

Item Value
gene id G191337
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 19418231 ~ 19428960 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU259585
aataaataaaatatataaataatataaaaaaagataaactaataaaaaaagtcatttaaaacagtcacaggctttctgatagtgattagaaactaaaagaaactttaagtttaatatatatatatatatatatataaattgcattacattacattaatattgttttatttctagCTGAAACAAAATAAGAGGACTTTATGAGGCTTACTCACAGCACCCTGATTAACCTGCAGGGCTTTACTGAGCCTAAAATTGACCAATAAGACAGAATTCTGTGGTCCTGATGTTTAGTCTTTGTTCCACTGTTGTCTCCATTCATGTGAAAcgggttttgtttgtttttccacgATTTATGAGCATCTGTTCTCGCTCTGTTCTAATGAACCCAgtcaaactgaaactgaaaccaaaaccaaaaccaagCTCCTACTGAGATTATATAAACACACTCGCTCTCTACAGACATTACCGAGAAAATCACTTTATATAGAAACCTGTTTCACATCTGCAGAACATCTGTCACCTGAATCTACAACACTAGCATTagcactattactattactattactattataataCAGATGTGAGGTAGTAAATAGGGAAACACTTACTATGAACgtcatgtctattagactctataaacatacacataatgcattataaacatggctataaataacacattatagctatgtttattatgcattatgaatggtGAATTGTGACACATCTACGGTAGGTTAAAtgatcatatacagctctggaaaaaatatatcactcaaaaaatgatgagtttctttgattttaccaaattgaaaatctctggaatataatcaagaggaagatggatgatcacaagccatcaaaccaccaaactgaactgcttgaacttttgcaccaggagtaaagcagcataaagttatccaaaagcagtgtgtaagactggtggaggagaacatgatgccaagatgcatgaaaactgtgattaaaaaccaaccagggttattccaccaaatattgatttctgaactcttaaaactttaatatgaatatgaacttgtttttcattgcatttttgttttttcagccatttctctttttctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259585 True 1104 lncRNA 0.32 2 19418231 19428960

Neighbor

gene id symbol gene type direction distance location
LOC103044542 NA coding downstream 723 19391793 ~ 19417508 (-)
LOC103044861 NA coding downstream 27331 19358413 ~ 19390900 (-)
LOC103037635 NA coding downstream 71924 19315818 ~ 19346307 (-)
LOC111195448 NA coding downstream 105472 19282103 ~ 19312759 (-)
LOC103038392 NA coding downstream 137235 19258732 ~ 19280996 (-)
LOC103037097 LOC108443694,LOC107743251,LOC107694868,LOC107578651,LOC107696460 coding upstream 105707 19534667 ~ 19564176 (-)
LOC103035977 tkta,LOC108443693,LOC107578334,LOC107582382,LOC107743250,LOC107694867 coding upstream 146738 19575698 ~ 19604021 (-)
LOC103043652 LOC108440521 coding upstream 356614 19785574 ~ 19792464 (-)
LOC111195449 NA coding upstream 458119 19887079 ~ 19891108 (-)
LOC103042725 LOC103042725 coding upstream 483915 19912875 ~ 19917461 (-)
G191339 NA non-coding downstream 89609 19327966 ~ 19328622 (-)
G191329 NA non-coding downstream 165142 19252876 ~ 19253089 (-)
G191328 NA non-coding downstream 168778 19249204 ~ 19249453 (-)
G191326 NA non-coding downstream 189057 19228734 ~ 19229174 (-)
G191321 NA non-coding downstream 221845 19194927 ~ 19196386 (-)
G191338 NA non-coding upstream 103986 19532946 ~ 19562551 (-)
LOC111195401 NA non-coding upstream 181424 19610384 ~ 19618060 (-)
G191357 NA non-coding upstream 191216 19620176 ~ 19620410 (-)
LOC103035771 NA non-coding upstream 192340 19621300 ~ 19623690 (-)
G191402 NA non-coding upstream 318740 19747700 ~ 19757762 (-)
LOC103032794 tusc2,tusc2b,LOC107593101,LOC107587002,LOC107695626 other downstream 515946 18897509 ~ 18902285 (-)
LOC111195399 wu:fd14a01,myhz1.2,LOC108444093,LOC108443910,LOC108444092,LOC108416711,LOC108416675,LOC108416954,LOC108443907,LOC108254798,LOC108261508,LOC107737926,LOC107575389,LOC108416101,LOC107681327,LOC108261437,LOC108254800,LOC106570860,LOC102780693,LOC101068441,LOC108417180,LOC101164155,LOC105899468,LOC107378336,LOC107378334,LOC101071797,LOC105890352,LOC107372732,LOC107093413,LOC108254796 other downstream 619316 18708319 ~ 18798915 (-)
LOC103041510 LOC108414096 other downstream 1102894 18311452 ~ 18315337 (-)
mrpl20 mrpl20 other downstream 1204701 18139363 ~ 18213530 (-)
LOC103036492 card19,LOC108443695 other upstream 82361 19511321 ~ 19528580 (-)
brk1 brk1,BRK1,LOC106565571 other upstream 1670387 21099347 ~ 21103218 (-)
npff npffl,npff,LOC107738884,LOC107677943,LOC107669931 other upstream 2001056 21430016 ~ 21436453 (-)
elmo2 elmo2,LOC106583331 other upstream 2081964 21510924 ~ 21544831 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other upstream 2418009 21846969 ~ 21851642 (-)

Expression


Co-expression Network