G191812


Basic Information

Item Value
gene id G191812
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 21526159 ~ 21528036 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU260283
agagcaagagagagcgagagaggtcgagcaagagagagcgagagagaccgagcaagagagaaagggagagagagacctaATGAGAGAGCATGAGTGACAGAgcagttgagagagagagagctggcaACATAGGAGAGCAAGAGTGACCGAACAAGAGAGAAGACCCAACGAGAAAGAGATAGATTGACTGAGCAATTGAGAGAGCGAATGCGAGAGCAAAAAAGAGGGAGAGCAAGTGACCAAGCAATTGAGAGAGTGAGCAAAGAAGACTAAGAGCGAAAGGGACCAGacaagagagaaagtgagagaccgAAGTAGAGACCAAGCAAGAGAGAATGCAAGTGTGACTGACCAAttgaaaaagtgagagagatcgaatgagagagtgtgagtgaccGAGCAGTTGAGAGAGCGATAGAAAGAGAgcgaaaaagagagcgagaatgACCGAACAAACGAAAAAGCAAGAGACGAATAAGATATCAAGcaagagagaatgtgagagtgaCCAAGCAATTGAGAAGATGGGACCCAAcgagaaagagcgagagtgaCCTGAGCAATTGAGAGAGCGAGTGCgagagcaaagaaagaaagcaagtgACCAGGCAATTGAAAGAGCAAGCAAGAAAActaagagcgagagagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260283 True 650 lncRNA 0.47 3 21526159 21528036

Neighbor

gene id symbol gene type direction distance location
LOC111195406 NA coding downstream 17898 21508052 ~ 21508261 (-)
itga7 itga7 coding downstream 28096 21442288 ~ 21498063 (-)
LOC103027815 LOC108424594,LOC106566152 coding downstream 97541 21412689 ~ 21428618 (-)
LOC103026802 NA coding downstream 177775 21342702 ~ 21348384 (-)
gpx1 gpx1a,LOC103031640,LOC108435306,LOC108255192,LOC107577558,LOC107718196,LOC103360354 coding downstream 411236 21112480 ~ 21114923 (-)
arfgap1 arfgap1 coding upstream 22719 21550755 ~ 21570651 (-)
LOC111195407 NA coding upstream 44331 21572367 ~ 21583063 (-)
LOC103033505 agap2 coding upstream 70091 21598127 ~ 21630334 (-)
cdk4 cdk4,LOC107747701,LOC106565448,LOC107701179,LOC107567936 coding upstream 119069 21647105 ~ 21663599 (-)
LOC103023479 tnnc1,LOC103023479,LOC108424583,LOC106571909,LOC103385538 coding upstream 477398 22005434 ~ 22012959 (-)
G191791 NA non-coding downstream 155380 21303518 ~ 21370779 (-)
G191787 NA non-coding downstream 246407 21279003 ~ 21279752 (-)
G191691 NA non-coding downstream 286637 21173472 ~ 21239522 (-)
G191664 NA non-coding downstream 419337 21105440 ~ 21106822 (-)
G191653 NA non-coding downstream 433924 21091820 ~ 21092235 (-)
G191827 NA non-coding upstream 181880 21709916 ~ 21711285 (-)
G191858 NA non-coding upstream 305106 21833142 ~ 21833495 (-)
G191870 NA non-coding upstream 332090 21860126 ~ 21924848 (-)
G191880 NA non-coding upstream 429805 21957841 ~ 21958432 (-)
G191884 NA non-coding upstream 438473 21966509 ~ 21966712 (-)
npff npffl,npff,LOC107738884,LOC107677943,LOC107669931 other downstream 89706 21430016 ~ 21436453 (-)
brk1 brk1,BRK1,LOC106565571 other downstream 422941 21099347 ~ 21103218 (-)
LOC103036492 card19,LOC108443695 other downstream 1997579 19511321 ~ 19528580 (-)
LOC103032794 tusc2,tusc2b,LOC107593101,LOC107587002,LOC107695626 other downstream 2623874 18897509 ~ 18902285 (-)
LOC111195399 wu:fd14a01,myhz1.2,LOC108444093,LOC108443910,LOC108444092,LOC108416711,LOC108416675,LOC108416954,LOC108443907,LOC108254798,LOC108261508,LOC107737926,LOC107575389,LOC108416101,LOC107681327,LOC108261437,LOC108254800,LOC106570860,LOC102780693,LOC101068441,LOC108417180,LOC101164155,LOC105899468,LOC107378336,LOC107378334,LOC101071797,LOC105890352,LOC107372732,LOC107093413,LOC108254796 other downstream 2727244 18708319 ~ 18798915 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other upstream 318933 21846969 ~ 21851642 (-)
alas1 alas1,LOC106583798 other upstream 821311 22349347 ~ 22362458 (-)
amhr2 NA other upstream 1181513 22709549 ~ 22722905 (-)
LOC103041653 phf20,LOC107655063,LOC107727854,LOC107561906 other upstream 1258127 22786163 ~ 22803642 (-)
G192251 adipor1,LOC107749488,LOC107385668 other upstream 1526597 23054633 ~ 23058805 (-)

Expression


Co-expression Network