G192145


Basic Information

Item Value
gene id G192145
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 22735091 ~ 22736242 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU260722
atgaaatattgtgatattattttagagccatatcgccctaTCACACTAAGCCTCTAAACTCTTTCTATATTTAACTACTAACAATCTGACAGTACAAACCCAAGACTCACCTGCACAGGTAAGAGTGAACATCAGAAAAGCCGTGGTACTGAGCCAGCGGGAACAGAATGCCTGTCGGACAGCGACCGTCACGCTGACGACAAAAGCTGCAGTTACAGATTCCACGACACGGAGGACAATGCCAGCCCTTATACTGACCGGATCCAGAAGGGCCACTTTGACGTCTTCGCCGTATCGGTTCCGAAGACACGGACCACAGAACTGGCCTTGTATCCCACGACAGTCTTCATTACGGCAGCACGTCTTCGTATCTACAGTTTTCTGTCGACACTGGTGACAGGTGGAGCCCTG

Function

GO:

id name namespace
GO:0090304 nucleic acid metabolic process biological_process
GO:0044260 cellular macromolecule metabolic process biological_process
GO:0006259 DNA metabolic process biological_process

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03430 Mismatch repair

RNA

RNA id representative length rna type GC content exon number start site end site
TU260722 True 411 lncRNA 0.49 2 22735091 22736242

Neighbor

gene id symbol gene type direction distance location
LOC103040317 faim2 coding downstream 29602 22693076 ~ 22705489 (-)
LOC103024753 LOC108424569 coding downstream 95543 22460458 ~ 22639548 (-)
eef1akmt3 NA coding downstream 432001 22297852 ~ 22303090 (-)
LOC111195450 NA coding downstream 441553 22286609 ~ 22293538 (-)
LOC103037062 LOC108424641,LOC106583265,LOC103359365,LOC100304514 coding downstream 450434 22259659 ~ 22284657 (-)
LOC103040941 ndrg3,LOC108412994,LOC107655061,LOC107727846,LOC107749481,LOC107562126 coding upstream 3491 22739733 ~ 22782472 (-)
LOC103042162 LOC108412995 coding upstream 69339 22805581 ~ 22840324 (-)
LOC103025695 sulf2a,LOC108412941,LOC107655065,LOC107749484,LOC107685697,LOC107600506 coding upstream 113899 22850141 ~ 22925668 (-)
timm17a timm17a,LOC107727855,LOC107554688,LOC106582745 coding upstream 204088 22940330 ~ 22945009 (-)
lmod1 NA coding upstream 215482 22951724 ~ 22959046 (-)
G192149 NA non-coding downstream 46953 22684675 ~ 22688138 (-)
G192138 NA non-coding downstream 81244 22609381 ~ 22653847 (-)
G192137 NA non-coding downstream 202375 22532454 ~ 22532716 (-)
G192120 NA non-coding downstream 293635 22407246 ~ 22441456 (-)
G192014 NA non-coding downstream 368758 22366008 ~ 22366333 (-)
G192235 NA non-coding upstream 202679 22938921 ~ 22939154 (-)
G192237 NA non-coding upstream 214765 22951007 ~ 22951326 (-)
G192232 NA non-coding upstream 225005 22961247 ~ 22962809 (-)
G192240 NA non-coding upstream 294410 23030652 ~ 23031070 (-)
LOC111195460 NA non-coding upstream 362596 23098838 ~ 23100988 (-)
amhr2 NA other downstream 12186 22709549 ~ 22722905 (-)
alas1 alas1,LOC106583798 other downstream 372633 22349347 ~ 22362458 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other downstream 883449 21846969 ~ 21851642 (-)
elmo2 elmo2,LOC106583331 other downstream 1190260 21510924 ~ 21544831 (-)
npff npffl,npff,LOC107738884,LOC107677943,LOC107669931 other downstream 1298638 21430016 ~ 21436453 (-)
LOC103041653 phf20,LOC107655063,LOC107727854,LOC107561906 other upstream 49921 22786163 ~ 22803642 (-)
G192251 adipor1,LOC107749488,LOC107385668 other upstream 318391 23054633 ~ 23058805 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other upstream 1303004 24039246 ~ 24105898 (-)
G192815 mdm4 other upstream 2475433 25211675 ~ 25217550 (-)
LOC111195415 tfeb other upstream 3138668 25874910 ~ 25878653 (-)

Expression


Co-expression Network