G192235


Basic Information

Item Value
gene id G192235
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 22938921 ~ 22939154 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU260845
aattattaactgaTTTTAggtaagacattattaaacattattattaatattacagattaaaaatattgtaaagatTATTACTGTCCTAACTAGCAACAATTAATAATTGTCAAtctgttgtaaatattgttaatatacCGGACATcaaaaaaagatagatagatggatggatggatggatggatggatacatacatacatacatacttacttacttacttacttacttacttac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260845 True 234 lncRNA 0.25 1 22938921 22939154

Neighbor

gene id symbol gene type direction distance location
LOC103025695 sulf2a,LOC108412941,LOC107655065,LOC107749484,LOC107685697,LOC107600506 coding downstream 13253 22850141 ~ 22925668 (-)
LOC103042162 LOC108412995 coding downstream 98597 22805581 ~ 22840324 (-)
LOC103040941 ndrg3,LOC108412994,LOC107655061,LOC107727846,LOC107749481,LOC107562126 coding downstream 156449 22739733 ~ 22782472 (-)
LOC103040317 faim2 coding downstream 233432 22693076 ~ 22705489 (-)
LOC103024753 LOC108424569 coding downstream 299373 22460458 ~ 22639548 (-)
timm17a timm17a,LOC107727855,LOC107554688,LOC106582745 coding upstream 1176 22940330 ~ 22945009 (-)
lmod1 NA coding upstream 12570 22951724 ~ 22959046 (-)
shisa4 shisa4,LOC107561500,LOC107727880,LOC107655068,LOC107749490,LOC107685700 coding upstream 24554 22963708 ~ 22972405 (-)
ipo9 ipo9,LOC106566056 coding upstream 35050 22974204 ~ 22993650 (-)
LOC103025998 kdm5b,LOC107600688,LOC107685701,LOC107561016,LOC107749493 coding upstream 56940 22996094 ~ 23028601 (-)
G192145 NA non-coding downstream 202679 22735091 ~ 22736242 (-)
G192149 NA non-coding downstream 250783 22684675 ~ 22688138 (-)
G192138 NA non-coding downstream 285074 22609381 ~ 22653847 (-)
G192137 NA non-coding downstream 406205 22532454 ~ 22532716 (-)
G192120 NA non-coding downstream 497465 22407246 ~ 22441456 (-)
G192237 NA non-coding upstream 11853 22951007 ~ 22951326 (-)
G192232 NA non-coding upstream 22093 22961247 ~ 22962809 (-)
G192240 NA non-coding upstream 91498 23030652 ~ 23031070 (-)
LOC111195460 NA non-coding upstream 159684 23098838 ~ 23100988 (-)
G192288 NA non-coding upstream 165954 23105108 ~ 23105627 (-)
LOC103041653 phf20,LOC107655063,LOC107727854,LOC107561906 other downstream 135279 22786163 ~ 22803642 (-)
amhr2 NA other downstream 216016 22709549 ~ 22722905 (-)
alas1 alas1,LOC106583798 other downstream 576463 22349347 ~ 22362458 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other downstream 1087279 21846969 ~ 21851642 (-)
elmo2 elmo2,LOC106583331 other downstream 1394090 21510924 ~ 21544831 (-)
G192251 adipor1,LOC107749488,LOC107385668 other upstream 115479 23054633 ~ 23058805 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other upstream 1100092 24039246 ~ 24105898 (-)
G192815 mdm4 other upstream 2272521 25211675 ~ 25217550 (-)
LOC111195415 tfeb other upstream 2935756 25874910 ~ 25878653 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other upstream 3772099 26711253 ~ 26724106 (-)

Expression


Co-expression Network