G192237


Basic Information

Item Value
gene id G192237
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 22951007 ~ 22951326 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU260847
taaaataacagagtttggtggcgccgagtggtccagcggtctaaagcgctgccactatgagcaggaggtcgccggttctaaccccagctcatgcagctttgccatcaagctgccggcgttagagggagcaaaattggccatTAAATCATTAAAGACCACGTCTATCTTCAATAACCTCATATAGAACATTGCAAAATTGTCATatagcaaaattggccctgctccctctgggtgggtagatggcgctctctccccacatcactcctacggtgatgtctgcagcacagggcgtctgtgagctgatgtaccagagccgagct

Function

GO: NA

KEGG:

id description
ko05322 Systemic lupus erythematosus
ko05034 Alcoholism

RNA

RNA id representative length rna type GC content exon number start site end site
TU260847 True 320 lncRNA 0.51 1 22951007 22951326

Neighbor

gene id symbol gene type direction distance location
timm17a timm17a,LOC107727855,LOC107554688,LOC106582745 coding downstream 5998 22940330 ~ 22945009 (-)
LOC103025695 sulf2a,LOC108412941,LOC107655065,LOC107749484,LOC107685697,LOC107600506 coding downstream 25339 22850141 ~ 22925668 (-)
LOC103042162 LOC108412995 coding downstream 110683 22805581 ~ 22840324 (-)
LOC103040941 ndrg3,LOC108412994,LOC107655061,LOC107727846,LOC107749481,LOC107562126 coding downstream 168535 22739733 ~ 22782472 (-)
LOC103040317 faim2 coding downstream 245518 22693076 ~ 22705489 (-)
lmod1 NA coding upstream 398 22951724 ~ 22959046 (-)
shisa4 shisa4,LOC107561500,LOC107727880,LOC107655068,LOC107749490,LOC107685700 coding upstream 12382 22963708 ~ 22972405 (-)
ipo9 ipo9,LOC106566056 coding upstream 22878 22974204 ~ 22993650 (-)
LOC103025998 kdm5b,LOC107600688,LOC107685701,LOC107561016,LOC107749493 coding upstream 44768 22996094 ~ 23028601 (-)
rabif rabif,LOC107601129,LOC107581890,LOC107749491 coding upstream 82149 23033475 ~ 23036792 (-)
G192235 NA non-coding downstream 11853 22938921 ~ 22939154 (-)
G192145 NA non-coding downstream 214765 22735091 ~ 22736242 (-)
G192149 NA non-coding downstream 262869 22684675 ~ 22688138 (-)
G192138 NA non-coding downstream 297160 22609381 ~ 22653847 (-)
G192137 NA non-coding downstream 418291 22532454 ~ 22532716 (-)
G192232 NA non-coding upstream 9921 22961247 ~ 22962809 (-)
G192240 NA non-coding upstream 79326 23030652 ~ 23031070 (-)
LOC111195460 NA non-coding upstream 147512 23098838 ~ 23100988 (-)
G192288 NA non-coding upstream 153782 23105108 ~ 23105627 (-)
G192293 NA non-coding upstream 203256 23154582 ~ 23155042 (-)
LOC103041653 phf20,LOC107655063,LOC107727854,LOC107561906 other downstream 147365 22786163 ~ 22803642 (-)
amhr2 NA other downstream 228102 22709549 ~ 22722905 (-)
alas1 alas1,LOC106583798 other downstream 588549 22349347 ~ 22362458 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other downstream 1099365 21846969 ~ 21851642 (-)
elmo2 elmo2,LOC106583331 other downstream 1406176 21510924 ~ 21544831 (-)
G192251 adipor1,LOC107749488,LOC107385668 other upstream 103307 23054633 ~ 23058805 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other upstream 1087920 24039246 ~ 24105898 (-)
G192815 mdm4 other upstream 2260349 25211675 ~ 25217550 (-)
LOC111195415 tfeb other upstream 2923584 25874910 ~ 25878653 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other upstream 3759927 26711253 ~ 26724106 (-)

Expression


Co-expression Network