G192240


Basic Information

Item Value
gene id G192240
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 23030652 ~ 23031070 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU260851
TCATCACTGATCCTTCACCAAATTTCACAGTGGGTGCAAGTACACCTCTGTAGGTTTTCATCTAAACATTTGATGGCCAGGTGTTGAGCAAAGCTGAAAATTggacccatcagtgtagatgaCCTTACTCCAGTCCTCTATAGTccaatttatataattttctgcAAACTTCAGCCTGGCTCTTCTTTGCTTCTAGCTAGTTCTGCCTCTTAAGAGATTGTTTTGAACTGTTCTTTTCAATGCACTTCACCCCAGCTGccattttccattctttttatAGATCTCTTTATGTCATCCTGCAGTTGCTGACTGACATTAAAATAAGTCAACGGTCAATTTACAGACCTGAACCCcactaaaaaaaactctgaatgtAATCATGTAAGATGTAAATTGGTCACAATCTATCAaacaaagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260851 True 419 lncRNA 0.38 1 23030652 23031070

Neighbor

gene id symbol gene type direction distance location
LOC103025998 kdm5b,LOC107600688,LOC107685701,LOC107561016,LOC107749493 coding downstream 2051 22996094 ~ 23028601 (-)
ipo9 ipo9,LOC106566056 coding downstream 37002 22974204 ~ 22993650 (-)
shisa4 shisa4,LOC107561500,LOC107727880,LOC107655068,LOC107749490,LOC107685700 coding downstream 58247 22963708 ~ 22972405 (-)
lmod1 NA coding downstream 71606 22951724 ~ 22959046 (-)
timm17a timm17a,LOC107727855,LOC107554688,LOC106582745 coding downstream 85643 22940330 ~ 22945009 (-)
rabif rabif,LOC107601129,LOC107581890,LOC107749491 coding upstream 2405 23033475 ~ 23036792 (-)
LOC103044418 adipor1 coding upstream 32097 23063167 ~ 23072202 (-)
LOC103045443 LOC108410710,LOC107727873,LOC107560790,LOC107685706,LOC107749489 coding upstream 43049 23074119 ~ 23082128 (-)
rnpep rnpep coding upstream 56456 23087526 ~ 23098564 (-)
c22h1orf106 LOC108410711,LOC107727857,LOC107655074 coding upstream 73184 23104254 ~ 23144408 (-)
G192232 NA non-coding downstream 67843 22961247 ~ 22962809 (-)
G192237 NA non-coding downstream 79326 22951007 ~ 22951326 (-)
G192235 NA non-coding downstream 91498 22938921 ~ 22939154 (-)
G192145 NA non-coding downstream 294410 22735091 ~ 22736242 (-)
G192149 NA non-coding downstream 342514 22684675 ~ 22688138 (-)
LOC111195460 NA non-coding upstream 67768 23098838 ~ 23100988 (-)
G192288 NA non-coding upstream 74038 23105108 ~ 23105627 (-)
G192293 NA non-coding upstream 123512 23154582 ~ 23155042 (-)
G192335 NA non-coding upstream 184520 23215590 ~ 23223369 (-)
G192336 NA non-coding upstream 185106 23216176 ~ 23224603 (-)
LOC103041653 phf20,LOC107655063,LOC107727854,LOC107561906 other downstream 227010 22786163 ~ 22803642 (-)
amhr2 NA other downstream 307747 22709549 ~ 22722905 (-)
alas1 alas1,LOC106583798 other downstream 668194 22349347 ~ 22362458 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other downstream 1179010 21846969 ~ 21851642 (-)
elmo2 elmo2,LOC106583331 other downstream 1485821 21510924 ~ 21544831 (-)
G192251 adipor1,LOC107749488,LOC107385668 other upstream 23563 23054633 ~ 23058805 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other upstream 1008176 24039246 ~ 24105898 (-)
G192815 mdm4 other upstream 2180605 25211675 ~ 25217550 (-)
LOC111195415 tfeb other upstream 2843840 25874910 ~ 25878653 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other upstream 3680183 26711253 ~ 26724106 (-)

Expression


Co-expression Network