G192288


Basic Information

Item Value
gene id G192288
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 23105108 ~ 23105627 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU260909
ctaaggtattgcttgtggatgcttaggtgttgctgtggtataagTGTTGATTGCTGAGGTATTTctaggtggatgctaaggtgttgctttggtatAGGGGTATTTCTATGTGgatgctaaggtggttgctgaggtattcCTAGGCAGGTGCTAAGATGTTGCTTTGGTATAGGTGTTAGTTCCTGGGTATTGCTCagtggatgctaaggtgttgctttggtatATGTGTTGGTTGCTGAtgtattgctaggtggatgctaaggtgttgctatgctagaggtgttggttgctaggtggatgctaaggtgttgctttggtatAGGTGTTGGTTGCTGGGTGaattctaaggtgttgctttgatATAAgtgctggttgctgaggtgctTTTAGGCacttgctatggtattgctcgATGGATGCTGAAGTGTTGCTGCAGTATAGTTGTTGGTTGATAAGTTATTTGCGAG

Function

GO:

id name namespace
GO:0008865 fructokinase activity molecular_function
GO:0004396 hexokinase activity molecular_function
GO:0019200 carbohydrate kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260909 True 467 lncRNA 0.44 2 23105108 23105627

Neighbor

gene id symbol gene type direction distance location
rnpep rnpep coding downstream 6544 23087526 ~ 23098564 (-)
LOC103045443 LOC108410710,LOC107727873,LOC107560790,LOC107685706,LOC107749489 coding downstream 22980 23074119 ~ 23082128 (-)
LOC103044418 adipor1 coding downstream 32906 23063167 ~ 23072202 (-)
rabif rabif,LOC107601129,LOC107581890,LOC107749491 coding downstream 68316 23033475 ~ 23036792 (-)
LOC103025998 kdm5b,LOC107600688,LOC107685701,LOC107561016,LOC107749493 coding downstream 76507 22996094 ~ 23028601 (-)
LOC103045076 gpr25 coding upstream 54041 23159668 ~ 23162419 (-)
LOC103047010 syt6,LOC107727826,LOC107560238,LOC107655078 coding upstream 103258 23208885 ~ 23282019 (-)
nfs1 nfs1,LOC107601922,LOC107559867 coding upstream 503626 23609253 ~ 23622118 (-)
LOC103042624 rbm39,LOC107655082,LOC107727761,LOC107602070 coding upstream 519283 23624910 ~ 23635826 (-)
LOC103041805 gem,rem1,LOC108411381,LOC107727768,LOC107655086,LOC107727184,LOC107685743,LOC107554936 coding upstream 542639 23648266 ~ 23660292 (-)
LOC111195460 NA non-coding downstream 4120 23098838 ~ 23100988 (-)
G192240 NA non-coding downstream 74038 23030652 ~ 23031070 (-)
G192232 NA non-coding downstream 142299 22961247 ~ 22962809 (-)
G192237 NA non-coding downstream 153782 22951007 ~ 22951326 (-)
G192235 NA non-coding downstream 165954 22938921 ~ 22939154 (-)
G192293 NA non-coding upstream 48955 23154582 ~ 23155042 (-)
G192335 NA non-coding upstream 109963 23215590 ~ 23223369 (-)
G192336 NA non-coding upstream 110549 23216176 ~ 23224603 (-)
G192365 NA non-coding upstream 223447 23329074 ~ 23329313 (-)
G192428 NA non-coding upstream 438908 23544535 ~ 23559176 (-)
G192251 adipor1,LOC107749488,LOC107385668 other downstream 46303 23054633 ~ 23058805 (-)
LOC103041653 phf20,LOC107655063,LOC107727854,LOC107561906 other downstream 301466 22786163 ~ 22803642 (-)
amhr2 NA other downstream 382203 22709549 ~ 22722905 (-)
alas1 alas1,LOC106583798 other downstream 742650 22349347 ~ 22362458 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other downstream 1253466 21846969 ~ 21851642 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other upstream 933619 24039246 ~ 24105898 (-)
G192815 mdm4 other upstream 2106048 25211675 ~ 25217550 (-)
LOC111195415 tfeb other upstream 2769283 25874910 ~ 25878653 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other upstream 3605626 26711253 ~ 26724106 (-)
G193097 NA other upstream 3926036 27031663 ~ 27033089 (-)

Expression


Co-expression Network