G192335


Basic Information

Item Value
gene id G192335
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 23215590 ~ 23223369 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU260961
TCTGAGGCGCAGAGACCCCAGCCTACACACTGCGCCACCGGGGACGAGCCGATGACGTCAGCGCCGGAAAGAACTAAATGACTCGCGGCAAGCGGAGCGCGAGCAAAGTAAACGAagtgaaagaaaataataataatcattatagcAGGATTAATGATTTGTAAACTGTGAGAACCAACCAATAAAGGCTAGATAAAAAGGTAAGCGAAGTTAGAAGGGAAAAGGTTTCCCCCTCTGGTCGCTAGAAACgatagaaagtttttttttttttttttttgtgacgaaagtgagagagagaaaagaagaaagacagCCTCGTGGTGACACGACCAACGAGGTGGAGTGATTAAAGCGAAGCAGGTAGCTccgaaagaaataaagagaacctCTGTGAACTGAGCCCAGTATACACTGTTCCCATAgaggtgaagagaaaaagaaggaataaagaGAACCTCTGTGAACTGAGCCCAGTATACACTGTTCTCATAgaggtgaagagaaaaagagagccaCTTGGCCACTCTAAGGAGATCGCTAGGAAAACCGGCATGGTCTTGCTTTCTGACAGGAATACTCAAGACTCTGCGCCGAGGAACCAGAAGGAAGCCCTTATAAGGTAGTGACACCAGCTGTTGTTAATCGCGCTGATTACCACTTGGCTTAGAGCGTGGCCTCCCTCTAGTGGTGGGAAGACCACGGCGCGGGCGGCCCCTTACACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU260961 True 723 lncRNA 0.47 2 23215590 23223369

Neighbor

gene id symbol gene type direction distance location
LOC103045076 gpr25 coding downstream 53171 23159668 ~ 23162419 (-)
c22h1orf106 LOC108410711,LOC107727857,LOC107655074 coding downstream 71182 23104254 ~ 23144408 (-)
rnpep rnpep coding downstream 117026 23087526 ~ 23098564 (-)
LOC103045443 LOC108410710,LOC107727873,LOC107560790,LOC107685706,LOC107749489 coding downstream 133462 23074119 ~ 23082128 (-)
LOC103044418 adipor1 coding downstream 143388 23063167 ~ 23072202 (-)
nfs1 nfs1,LOC107601922,LOC107559867 coding upstream 385884 23609253 ~ 23622118 (-)
LOC103042624 rbm39,LOC107655082,LOC107727761,LOC107602070 coding upstream 401541 23624910 ~ 23635826 (-)
LOC103041805 gem,rem1,LOC108411381,LOC107727768,LOC107655086,LOC107727184,LOC107685743,LOC107554936 coding upstream 424897 23648266 ~ 23660292 (-)
LOC103042306 NA coding upstream 449739 23673108 ~ 23680391 (-)
LOC103041505 pnp4a,LOC103041505,LOC108411380,LOC107727193,LOC107685744,LOC107655042,LOC107727769,LOC107559547 coding upstream 458840 23682209 ~ 23696247 (-)
G192293 NA non-coding downstream 60548 23154582 ~ 23155042 (-)
G192288 NA non-coding downstream 109963 23105108 ~ 23105627 (-)
LOC111195460 NA non-coding downstream 114602 23098838 ~ 23100988 (-)
G192240 NA non-coding downstream 184520 23030652 ~ 23031070 (-)
G192232 NA non-coding downstream 252781 22961247 ~ 22962809 (-)
G192365 NA non-coding upstream 105705 23329074 ~ 23329313 (-)
G192428 NA non-coding upstream 321166 23544535 ~ 23559176 (-)
G192439 dvl1,LOC108411373,LOC107685713,LOC107560111,LOC107749512,LOC107655081,LOC107727776 non-coding upstream 378950 23602319 ~ 23607031 (-)
G192484 NA non-coding upstream 653266 23876635 ~ 23884538 (-)
G192574 NA non-coding upstream 768827 23992196 ~ 24049734 (-)
G192251 adipor1,LOC107749488,LOC107385668 other downstream 156785 23054633 ~ 23058805 (-)
LOC103041653 phf20,LOC107655063,LOC107727854,LOC107561906 other downstream 411948 22786163 ~ 22803642 (-)
amhr2 NA other downstream 492685 22709549 ~ 22722905 (-)
alas1 alas1,LOC106583798 other downstream 853132 22349347 ~ 22362458 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other downstream 1363948 21846969 ~ 21851642 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other upstream 815877 24039246 ~ 24105898 (-)
G192815 mdm4 other upstream 1988306 25211675 ~ 25217550 (-)
LOC111195415 tfeb other upstream 2651541 25874910 ~ 25878653 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other upstream 3487884 26711253 ~ 26724106 (-)
G193097 NA other upstream 3808294 27031663 ~ 27033089 (-)

Expression


Co-expression Network