G192579


Basic Information

Item Value
gene id G192579
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 24082804 ~ 24083308 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU261319
AAATTTGATTTCTTGCCACAGCTTAATGTATGGTCTACATTAGCTTAATGGTAGAGCACATAACCCCAACTACCTGTAGCatcttaaaggtcaccttccgcgaaaatccgatttttcttgttttttgtggaatacagtaggtctctccgagttgaatgtgtacacctgcacattaaactgttttgcagcccccattgtctgcaggagctaagcaaagaaatcccccctccccccctccgaaaaacgggtgaattttgaattatctttctgcctacgtaggcagaaactcacagaccagcccaccttggctcgagaaactcccagagacggagctgaagcgacgcaacatcaccgctcatcagttaggaggtgggaggcagtgagcggcagagcggtggaggggcgtcgcagtgctcctagccaatcagaggagagatatttgcatgctgtttgcatgtatgaatattcatgagcaaagctggaatccggtcattttggacacacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU261319 True 505 lncRNA 0.48 1 24082804 24083308

Neighbor

gene id symbol gene type direction distance location
LOC103040944 LOC108425718 coding downstream 55759 24015546 ~ 24027045 (-)
LOC103040645 chia.2,chia.3,LOC108425699,LOC107555079,LOC107685745,LOC107727181,LOC107655977,LOC107727762 coding downstream 80856 23994623 ~ 24001948 (-)
LOC103040327 LOC108425717 coding downstream 94605 23980543 ~ 23988199 (-)
zc3h11a NA coding downstream 112637 23957828 ~ 23970167 (-)
LOC103046362 maf1,LOC108425756,LOC108254834,LOC107727190,LOC107685718,LOC107602775,LOC106583327 coding downstream 126467 23948531 ~ 23956337 (-)
nfasc nfasc coding upstream 64519 24147827 ~ 24283699 (-)
LOC103045744 NA coding upstream 690731 24774039 ~ 24800901 (-)
lrrn2 lrrn2,LOC108425772,LOC107603068,LOC107739267,LOC107727852,LOC107675837,LOC107656005 coding upstream 1151806 25235114 ~ 25354477 (-)
LOC103039085 NA coding upstream 1425180 25508488 ~ 25554687 (-)
LOC103038137 NA coding upstream 1444334 25527642 ~ 25537003 (-)
G192578 NA non-coding downstream 27219 24055294 ~ 24055585 (-)
G192574 NA non-coding downstream 33070 23992196 ~ 24049734 (-)
G192484 NA non-coding downstream 198266 23876635 ~ 23884538 (-)
G192439 dvl1,LOC108411373,LOC107685713,LOC107560111,LOC107749512,LOC107655081,LOC107727776 non-coding downstream 475773 23602319 ~ 23607031 (-)
G192428 NA non-coding downstream 523628 23544535 ~ 23559176 (-)
G192589 NA non-coding upstream 177326 24260634 ~ 24262555 (-)
G192591 NA non-coding upstream 197066 24280374 ~ 24280691 (-)
G192597 NA non-coding upstream 216898 24300206 ~ 24352058 (-)
G192754 NA non-coding upstream 761247 24844555 ~ 24860400 (-)
G192757 NA non-coding upstream 821832 24905140 ~ 24905345 (-)
G192251 adipor1,LOC107749488,LOC107385668 other downstream 1023999 23054633 ~ 23058805 (-)
LOC103041653 phf20,LOC107655063,LOC107727854,LOC107561906 other downstream 1279162 22786163 ~ 22803642 (-)
amhr2 NA other downstream 1359899 22709549 ~ 22722905 (-)
alas1 alas1,LOC106583798 other downstream 1720346 22349347 ~ 22362458 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other downstream 2231162 21846969 ~ 21851642 (-)
G192815 mdm4 other upstream 1128367 25211675 ~ 25217550 (-)
LOC111195415 tfeb other upstream 1791602 25874910 ~ 25878653 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other upstream 2627945 26711253 ~ 26724106 (-)
G193097 NA other upstream 2948355 27031663 ~ 27033089 (-)
LOC111195340 NA other upstream 3307486 27390794 ~ 27391571 (-)

Expression


Co-expression Network