G192597


Basic Information

Item Value
gene id G192597
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 24300206 ~ 24352058 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU261366
ctgtatataaagatggacgccgtgtcgccgttcccattcattcaatgaaaatgaagccaaaatcttcctccattttggcgattcagagaccagagtctgcgcagtagagaccagaggagggagaaagactgtggagagaccgcctactcatttaaataaccccgcccctgagggctgcctcgcggtcacagactgcagagcggggcggagcggagCGGAGCTGACACAGATTAACCAGCGGCTTCCTCAGCGTTTAACTGCACCCTGACCCGCTTCACCCAGAGCTCCTCTCCATTCAGACAGAAATGCAGATTATACAACACAGGTCATTAGAAATGCATCTAAACATGTAGCCAAATACGGAATATTAAACACGTAGTTTACAGAtctttcattaattttactcattTCTATCATTTAATAATTCAAATAACCAGAGTAAAAGCAACTCCAAAACTAGAACTTAAAATATGTACAg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU261366 True 478 lncRNA 0.45 2 24300206 24352058

Neighbor

gene id symbol gene type direction distance location
nfasc nfasc coding downstream 16507 24147827 ~ 24283699 (-)
LOC103040944 LOC108425718 coding downstream 273161 24015546 ~ 24027045 (-)
LOC103040645 chia.2,chia.3,LOC108425699,LOC107555079,LOC107685745,LOC107727181,LOC107655977,LOC107727762 coding downstream 298258 23994623 ~ 24001948 (-)
LOC103040327 LOC108425717 coding downstream 312007 23980543 ~ 23988199 (-)
zc3h11a NA coding downstream 330039 23957828 ~ 23970167 (-)
LOC103045744 NA coding upstream 421981 24774039 ~ 24800901 (-)
lrrn2 lrrn2,LOC108425772,LOC107603068,LOC107739267,LOC107727852,LOC107675837,LOC107656005 coding upstream 883056 25235114 ~ 25354477 (-)
LOC103039085 NA coding upstream 1156430 25508488 ~ 25554687 (-)
LOC103038137 NA coding upstream 1175584 25527642 ~ 25537003 (-)
ppfia4 ppfia4 coding upstream 1235668 25587726 ~ 25770719 (-)
G192591 NA non-coding downstream 19515 24280374 ~ 24280691 (-)
G192589 NA non-coding downstream 37651 24260634 ~ 24262555 (-)
G192579 NA non-coding downstream 216898 24082804 ~ 24083308 (-)
G192578 NA non-coding downstream 244621 24055294 ~ 24055585 (-)
G192574 NA non-coding downstream 250472 23992196 ~ 24049734 (-)
G192754 NA non-coding upstream 492497 24844555 ~ 24860400 (-)
G192757 NA non-coding upstream 553082 24905140 ~ 24905345 (-)
G192758 NA non-coding upstream 557751 24909809 ~ 24910029 (-)
G192763 NA non-coding upstream 610451 24962509 ~ 24963790 (-)
G192806 NA non-coding upstream 838035 25190093 ~ 25192060 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other downstream 194308 24039246 ~ 24105898 (-)
G192251 adipor1,LOC107749488,LOC107385668 other downstream 1241401 23054633 ~ 23058805 (-)
LOC103041653 phf20,LOC107655063,LOC107727854,LOC107561906 other downstream 1496564 22786163 ~ 22803642 (-)
amhr2 NA other downstream 1577301 22709549 ~ 22722905 (-)
alas1 alas1,LOC106583798 other downstream 1937748 22349347 ~ 22362458 (-)
G192815 mdm4 other upstream 859617 25211675 ~ 25217550 (-)
LOC111195415 tfeb other upstream 1522852 25874910 ~ 25878653 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other upstream 2359195 26711253 ~ 26724106 (-)
G193097 NA other upstream 2679605 27031663 ~ 27033089 (-)
LOC111195340 NA other upstream 3038736 27390794 ~ 27391571 (-)

Expression


Co-expression Network