G192754


Basic Information

Item Value
gene id G192754
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 24844555 ~ 24860400 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU261576
TTTTTGGACGATCGTGAACTCTTTATTAACACTGCAGAGCTTTATGCATTACAGCATGATTACAGATCCAGACTCCCGCTGAGAAGGAAAACGTGTGCATTCATGGTTAGGCAGTGCGCATGTGTAAATGTCAAACTATAAATATTTGAGAGTTGCTAAGTAACCCCTGCATCCACCTGCGCTACATCAACCAATCCAGTTATTATAAATAGATGCTATAGCTGAGCTGTCGCTATATACATGCCATCTGAACAGGGAGTCGACTCTTAGTGCTTGGTTTTTAGCGATTCGGTTTAGAGGAGTCTTGTACGAGGCAGAATTGGGCTGTAGGCCAATTATAAAGAAGTCTTAATAGCACACTTCATGACAGATCtgtgtttaaatatgtaaatatatggtaGGTGGGCTCCTGATAGATTGCATGTGTGAAGAAGACTGACTGAAGGACACATTCCAACACTGGGAGCTGATCACCATCTAGTGGGGGGACTGTAGTAGAGCAAGAGGAGTTGCAGAGCTGGAGAAACCCTGTCTTCTCCTTCTTTGATTGGATAGAAAAACGTGTTGTTGGTGGTCCCACCTCTTATATTCCACTTAAACATGCTGTTGTGGAGCAAATTGACCAGTTTCTGAGTTTAGAAATACAGGATAATTAGAACCAATAGCAGCAAATCCTCAGCAAACACGCTCTTAGGGGGCTCACATGGGTAAGGTGGGTTCCAATTgctccaaattgaaaacctctggaatataacaatcaagaggaagctgaaagaatcacaagccatcaaaccaagctgtgtgaactgcttgaattttggcaccaggagtgtaaagcatgaggttatccaaaagcagtgtgtaagactggtggaggagaacatgccaagatgcattaaactgtgattaaaaacagggttattccaccaaaaacatgatttctgaacccttaaaactttacattatgaacttgttttctttgcattatttgaagtctgaaagctctgcatcttttttttgttatttcagacatttctcattttctgcaaataaatgctctaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU261576 True 1063 lncRNA 0.41 3 24844555 24860400

Neighbor

gene id symbol gene type direction distance location
LOC103045744 NA coding downstream 43654 24774039 ~ 24800901 (-)
nfasc nfasc coding downstream 560856 24147827 ~ 24283699 (-)
LOC103040944 LOC108425718 coding downstream 817510 24015546 ~ 24027045 (-)
LOC103040645 chia.2,chia.3,LOC108425699,LOC107555079,LOC107685745,LOC107727181,LOC107655977,LOC107727762 coding downstream 842607 23994623 ~ 24001948 (-)
LOC103040327 LOC108425717 coding downstream 856356 23980543 ~ 23988199 (-)
lrrn2 lrrn2,LOC108425772,LOC107603068,LOC107739267,LOC107727852,LOC107675837,LOC107656005 coding upstream 374714 25235114 ~ 25354477 (-)
LOC103039085 NA coding upstream 648088 25508488 ~ 25554687 (-)
LOC103038137 NA coding upstream 667242 25527642 ~ 25537003 (-)
ppfia4 ppfia4 coding upstream 727326 25587726 ~ 25770719 (-)
LOC103036054 mdfi,LOC103036054,LOC107548515,LOC107675846,LOC107728619 coding upstream 1148396 26008796 ~ 26085478 (-)
G192597 NA non-coding downstream 492497 24300206 ~ 24352058 (-)
G192591 NA non-coding downstream 563864 24280374 ~ 24280691 (-)
G192589 NA non-coding downstream 582000 24260634 ~ 24262555 (-)
G192579 NA non-coding downstream 761247 24082804 ~ 24083308 (-)
G192578 NA non-coding downstream 788970 24055294 ~ 24055585 (-)
G192757 NA non-coding upstream 44740 24905140 ~ 24905345 (-)
G192758 NA non-coding upstream 49409 24909809 ~ 24910029 (-)
G192763 NA non-coding upstream 102109 24962509 ~ 24963790 (-)
G192806 NA non-coding upstream 329693 25190093 ~ 25192060 (-)
G192821 NA non-coding upstream 402639 25263039 ~ 25263994 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other downstream 738657 24039246 ~ 24105898 (-)
G192251 adipor1,LOC107749488,LOC107385668 other downstream 1785750 23054633 ~ 23058805 (-)
LOC103041653 phf20,LOC107655063,LOC107727854,LOC107561906 other downstream 2040913 22786163 ~ 22803642 (-)
amhr2 NA other downstream 2121650 22709549 ~ 22722905 (-)
alas1 alas1,LOC106583798 other downstream 2482097 22349347 ~ 22362458 (-)
G192815 mdm4 other upstream 351275 25211675 ~ 25217550 (-)
LOC111195415 tfeb other upstream 1014510 25874910 ~ 25878653 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other upstream 1850853 26711253 ~ 26724106 (-)
G193097 NA other upstream 2171263 27031663 ~ 27033089 (-)
LOC111195340 NA other upstream 2530394 27390794 ~ 27391571 (-)

Expression


Co-expression Network