G193062


Basic Information

Item Value
gene id G193062
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 26898271 ~ 26899404 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU261975
CTGAGAATCATGTGGTCTTTATTCTTCAGTCCGTCTCCGGCCTCTGCTCCTGCCGGTCTCTGAAGACCCATTACCAGCGCTCTCTCCAGAACCTGCACAATGATCCAATGACCAGACAGAGCCTCCTTTATTCAGCAGAGCTCAGACTGCTGCTCATAATTATTATCATAAACTCATAACATCAACAGAGGAACCGCAGGGCTGTGAATAGCCATATAGGTAAGCGTTACACACTGACATGTCTTGTGTCATTGGGCAGGAACTGGTATcgtgtctcatgacttttgccatgttcacagaggaatgttaaatattcACACAACTTGAAACAGAAATACAATTTCCAATAcgtctggcacccactatcacacCTCACTCCAGtgtgaaactcatatgttatatagatgtattacacacagagtgatctattttaagcgtttatttcttttattgttgatgattatggcttacagccaataaaaaaaaaaaaaatcagtgtctcagaaaatttgaattgTGGGCAGTatggcaagtcctgctggaaaatgaaatctgcatgtcCATAAAGGTTAACTcttcaattatattttatttttttgacatGCACCTGTAATTCACATTGTTTTGCCATGAGCATTCTGGCCactgttcaacctcactcacaagataacacctcaaaacttatAAAGGTATAGGCATTCTCAAGCCATACCCTGGTAAGTTAACACTTCACATAATTTTCTTTACATACTGACTGTTGTCCAATTACTTtcggcatgtcagtgtacattacattacattacatttggcagaaggtcaaagggtaataataggatagaggagtgaaggaggggaagagggaaatgaggttagaagtagttagtgtgttagaggtgttaagagagtaagtgctctttgaagagctctgtcttcaggagtctcttaaagatagtgagagattctcctgatctggtagtggaaggtagtttgttccaccattgggaaactctgtatgagaacagtctggattgctttgtgtgaatgtttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU261975 True 1048 lncRNA 0.40 2 26898271 26899404

Neighbor

gene id symbol gene type direction distance location
LOC103035733 foxp4,LOC107739274,LOC107728618 coding downstream 548566 26114437 ~ 26349705 (-)
LOC103036054 mdfi,LOC103036054,LOC107548515,LOC107675846,LOC107728619 coding downstream 812793 26008796 ~ 26085478 (-)
ppfia4 ppfia4 coding downstream 1127552 25587726 ~ 25770719 (-)
LOC103039085 NA coding downstream 1343584 25508488 ~ 25554687 (-)
il10 NA coding upstream 229748 27129152 ~ 27133856 (-)
LOC103047370 NA coding upstream 248310 27147714 ~ 27153326 (-)
prelp prelp coding upstream 263343 27162747 ~ 27170995 (-)
LOC103032351 LOC108435192 coding upstream 297647 27197051 ~ 27210316 (-)
LOC103031188 chia,LOC108435172,LOC108255197,LOC108255198 coding upstream 375253 27274657 ~ 27290319 (-)
G193049 NA non-coding downstream 21651 26876370 ~ 26876620 (-)
G193020 NA non-coding downstream 279293 26618746 ~ 26618978 (-)
G193018 NA non-coding downstream 320287 26577732 ~ 26577984 (-)
G193017 NA non-coding downstream 404709 26493203 ~ 26493562 (-)
G193014 NA non-coding downstream 463489 26434508 ~ 26434782 (-)
G193085 NA non-coding upstream 27704 26927108 ~ 26999073 (-)
G193110 NA non-coding upstream 238679 27138083 ~ 27139236 (-)
G193156 NA non-coding upstream 330695 27230099 ~ 27230302 (-)
G193160 NA non-coding upstream 340022 27239426 ~ 27239902 (-)
G193165 NA non-coding upstream 365063 27264467 ~ 27299949 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other downstream 174165 26711253 ~ 26724106 (-)
LOC111195415 tfeb other downstream 1019618 25874910 ~ 25878653 (-)
G192815 mdm4 other downstream 1680721 25211675 ~ 25217550 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other downstream 2792373 24039246 ~ 24105898 (-)
G192251 adipor1,LOC107749488,LOC107385668 other downstream 3839466 23054633 ~ 23058805 (-)
G193097 NA other upstream 132259 27031663 ~ 27033089 (-)
LOC111195340 NA other upstream 491390 27390794 ~ 27391571 (-)
LOC103046149 LOC102777140,LOC108436414,LOC102208887,LOC105027122,LOC108280970,LOC103144351,LOC107751002 other upstream 525638 27425042 ~ 27701331 (-)
tmem167b tmem167b other upstream 1111587 28010991 ~ 28015612 (-)
LOC111195422 si:dkey-33m11.6,LOC108411515,LOC108255079,LOC107572850,LOC107714486,LOC107680422 other upstream 1294975 28194379 ~ 28213070 (-)

Expression


Co-expression Network