G193110


Basic Information

Item Value
gene id G193110
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 27138083 ~ 27139236 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU262036
AGAAAAAGCCTTAATTGAATGCCTTAAtgtttgatattatattattatataatcctaacagtacagtaagtcacaacTCTATATtgaagcccagtcatgcaaaaaaacgataaacaaataataataaaaatactgtgatataccgtgaaaccgccAGAATCttgtaaaatactgtgatatgcatttttggtcataccgcccagcactagtatGTACCATACataactgtatattatatattaatatgcatatttaatatgtatattatgtatgtatataataaaatacccTATGTACCATAATGTCTAAAGCCTTTAAATAAGTTACAGTGAGTAttttcaaaactatttaaagaaACCTGAGAAGTTTTTAACACGGGCAACTTTACATATGTGTAATTTACATTTTGCTGAAGGCAAACTAACCATTGAGTACGGGCAGTCCTAAATTGGCTAGTTCCAGTAAACAACAGCAAAGCTGCGAGATGAAACTCCACCATTGCTCATTAAGCCAAAGTGTAAAGTCAGCATATGACGTGTCATTTACttcattaatacacagaaaGAGGATCTAACATAAAGCAGCTGGCATTAATAAAACGCATACTTCAATTATATTATTACTCTTCAACACTGTCTGTCAAATTACAGATATAACAGATATAAAAACCACATCTCTCAAGAGGACATGATCGATTGAGGTCATGCCACCTGACTCAAAGGAAAACGTTTTAAACTAGGCAACACACTCAGCATCTTCGATGacgtgtttagtttttttcgTAACGCACGCATTTGTGTAAGACGTGTGTAAAAGTGGGAGTCAGATTCTACAGAAGCTGATTGAGTCAGctgtccatctatccatccatctggcCGTCCATCTTCATCCTGCCGACGCAATCTCAAAGAATATCCTCGAAACACGTTGAGTGAGTAACTCATGTAAATCCACAGCATCCGTCCCAAGAATAACGACATACTCGAGCAGTGATGTTGTCATTAGTGAAAAATAAAGATCTCCTCTTCATTGCCCCATCTTCGAAAGCATCTGTAGTTTCGAACGTCtgtaaacaagaaaaagtgtcCTTTTAAACTTCATAACGCAACTCCTTGTCATCTTTCTAGGCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262036 True 1132 lncRNA 0.36 2 27138083 27139236

Neighbor

gene id symbol gene type direction distance location
il10 NA coding downstream 4227 27129152 ~ 27133856 (-)
LOC103035733 foxp4,LOC107739274,LOC107728618 coding downstream 788378 26114437 ~ 26349705 (-)
LOC103036054 mdfi,LOC103036054,LOC107548515,LOC107675846,LOC107728619 coding downstream 1052605 26008796 ~ 26085478 (-)
ppfia4 ppfia4 coding downstream 1367364 25587726 ~ 25770719 (-)
LOC103039085 NA coding downstream 1583396 25508488 ~ 25554687 (-)
LOC103047370 NA coding upstream 8478 27147714 ~ 27153326 (-)
prelp prelp coding upstream 23511 27162747 ~ 27170995 (-)
LOC103032351 LOC108435192 coding upstream 57815 27197051 ~ 27210316 (-)
LOC103031188 chia,LOC108435172,LOC108255197,LOC108255198 coding upstream 135421 27274657 ~ 27290319 (-)
LOC107197599 NA coding upstream 147984 27287220 ~ 27292809 (-)
G193085 NA non-coding downstream 139010 26927108 ~ 26999073 (-)
G193056 NA non-coding downstream 238269 26885836 ~ 26899814 (-)
G193062 NA non-coding downstream 238679 26898271 ~ 26899404 (-)
G193049 NA non-coding downstream 261463 26876370 ~ 26876620 (-)
G193020 NA non-coding downstream 519105 26618746 ~ 26618978 (-)
G193156 NA non-coding upstream 90863 27230099 ~ 27230302 (-)
G193160 NA non-coding upstream 100190 27239426 ~ 27239902 (-)
G193165 NA non-coding upstream 125231 27264467 ~ 27299949 (-)
G193154 NA non-coding upstream 156492 27295728 ~ 27305659 (-)
G193178 NA non-coding upstream 185170 27324406 ~ 27324839 (-)
G193097 NA other downstream 104994 27031663 ~ 27033089 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other downstream 413977 26711253 ~ 26724106 (-)
LOC111195415 tfeb other downstream 1259430 25874910 ~ 25878653 (-)
G192815 mdm4 other downstream 1920533 25211675 ~ 25217550 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other downstream 3032185 24039246 ~ 24105898 (-)
LOC111195340 NA other upstream 251558 27390794 ~ 27391571 (-)
LOC103046149 LOC102777140,LOC108436414,LOC102208887,LOC105027122,LOC108280970,LOC103144351,LOC107751002 other upstream 285806 27425042 ~ 27701331 (-)
tmem167b tmem167b other upstream 871755 28010991 ~ 28015612 (-)
LOC111195422 si:dkey-33m11.6,LOC108411515,LOC108255079,LOC107572850,LOC107714486,LOC107680422 other upstream 1055143 28194379 ~ 28213070 (-)
LOC111195343 LOC108434908 other upstream 1436871 28576107 ~ 28586222 (-)

Expression


Co-expression Network