G193200


Basic Information

Item Value
gene id G193200
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 27400837 ~ 27401642 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU262160
cactgtaaaaagtgaagcatggagctgttcattcaagctaataaatatgattgaacacatagtacaattattgactttattgtgaaactcaacctttttgaattttgatgtgtcaattttgattcagactaaattaattacaattctgaaggaaataaaccaaatgttttggttccactgaaatcatactcgaagaaaagagataaggatgtaatatttttaatttgaatcaaacatgaagtgcgcatgcgcactgtggagcacgggagaagttgtagagaagtgcttcagagcactgagggagagagggagaaagtgcctgaacgcgctcgcgagagagagaatgagagagggagaaagtgcctgaacgcgctcgcgagatagcaacgcatgcttatggtattgtggcgtcgggactggagggggggcggaaggaattatgggagctcaccctgttgggggaagtgggtgtttttctgcgtgtttatgttactgtttatcccagagtttcatgtcatgttttattatcactgttctagtattattcatgtagttatcagttatgtggttgttttgtgcctcaccctttgtgtgttttctgtgtgtgggagtggggttagctgcgttggagctgtagttagttttactttcaaaagtggaatcccatgtaaatccagctcttagtgtcctcctcagagcaaaataaaaagagcaagagagcactgaaacgaatctcgctggtaatccgtcctcttccacgccacagtaacttctggaacttctgaatatgctgccatgtttttttt

Function

GO: NA

KEGG:

id description
ko00591 Linoleic acid metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU262160 True 806 lncRNA 0.42 1 27400837 27401642

Neighbor

gene id symbol gene type direction distance location
LOC103029919 NA coding downstream 96897 27301296 ~ 27303940 (-)
LOC103046766 LOC108436454 coding downstream 101266 27296666 ~ 27299571 (-)
LOC107197599 NA coding downstream 108028 27287220 ~ 27292809 (-)
LOC103031188 chia,LOC108435172,LOC108255197,LOC108255198 coding downstream 110518 27274657 ~ 27290319 (-)
LOC103032351 LOC108435192 coding downstream 190521 27197051 ~ 27210316 (-)
bcl2l15 NA coding upstream 43837 27445479 ~ 27453376 (-)
kif21b kif21b coding upstream 355585 27757227 ~ 27874978 (-)
LOC103045240 LOC108436365,LOC107592563,LOC107699336,LOC107680449,LOC107751004,LOC108254807 coding upstream 510033 27911675 ~ 27955052 (-)
LOC103028137 LOC103028137,LOC108436315,LOC104939458,LOC108254806,LOC103386138 coding upstream 560725 27962367 ~ 28008609 (-)
b3galt6 b3galt6,LOC107592565,LOC107680432,LOC107699339,LOC107555998 coding upstream 622695 28024337 ~ 28028670 (-)
G193198 NA non-coding downstream 10689 27389723 ~ 27390148 (-)
LOC111195418 NA non-coding downstream 13933 27384262 ~ 27386904 (-)
G193194 NA non-coding downstream 13937 27383131 ~ 27386900 (-)
LOC111195339 NA non-coding downstream 16796 27382980 ~ 27384041 (-)
G193185 NA non-coding downstream 30404 27370175 ~ 27370433 (-)
G193223 NA non-coding upstream 87223 27488865 ~ 27506529 (-)
G193226 NA non-coding upstream 91408 27493050 ~ 27494923 (-)
G193367 NA non-coding upstream 322218 27723860 ~ 27724105 (-)
G193369 NA non-coding upstream 329361 27731003 ~ 27731662 (-)
G193370 NA non-coding upstream 334260 27735902 ~ 27736111 (-)
LOC111195340 NA other downstream 9266 27390794 ~ 27391571 (-)
G193097 NA other downstream 367748 27031663 ~ 27033089 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other downstream 676731 26711253 ~ 26724106 (-)
LOC111195415 tfeb other downstream 1522184 25874910 ~ 25878653 (-)
G192815 mdm4 other downstream 2183287 25211675 ~ 25217550 (-)
LOC103046149 LOC102777140,LOC108436414,LOC102208887,LOC105027122,LOC108280970,LOC103144351,LOC107751002 other upstream 23400 27425042 ~ 27701331 (-)
tmem167b tmem167b other upstream 609349 28010991 ~ 28015612 (-)
LOC111195422 si:dkey-33m11.6,LOC108411515,LOC108255079,LOC107572850,LOC107714486,LOC107680422 other upstream 792737 28194379 ~ 28213070 (-)
LOC111195343 LOC108434908 other upstream 1174465 28576107 ~ 28586222 (-)
G193541 NA other upstream 1195913 28597555 ~ 28598638 (-)

Expression


Co-expression Network