G193370


Basic Information

Item Value
gene id G193370
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 27735902 ~ 27736111 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU262409
caatttcagatagtcctgatagtacactacttgtatgtttcactcacttaaaatcagaacattttgatgtgtcattttaaaataaaagccctttaaattgtaacatttatgtaattttacacaatatttagactgttattaaaagaaatctgtctgatatcacagttcaatttcatatagtcctgatagtacactacttgtatgtttcac

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262409 True 210 lncRNA 0.28 1 27735902 27736111

Neighbor

gene id symbol gene type direction distance location
bcl2l15 NA coding downstream 282526 27445479 ~ 27453376 (-)
LOC103029919 NA coding downstream 431962 27301296 ~ 27303940 (-)
LOC103046766 LOC108436454 coding downstream 436331 27296666 ~ 27299571 (-)
LOC107197599 NA coding downstream 443093 27287220 ~ 27292809 (-)
LOC103031188 chia,LOC108435172,LOC108255197,LOC108255198 coding downstream 445583 27274657 ~ 27290319 (-)
kif21b kif21b coding upstream 21116 27757227 ~ 27874978 (-)
LOC103045240 LOC108436365,LOC107592563,LOC107699336,LOC107680449,LOC107751004,LOC108254807 coding upstream 175564 27911675 ~ 27955052 (-)
LOC103028137 LOC103028137,LOC108436315,LOC104939458,LOC108254806,LOC103386138 coding upstream 226256 27962367 ~ 28008609 (-)
b3galt6 b3galt6,LOC107592565,LOC107680432,LOC107699339,LOC107555998 coding upstream 288226 28024337 ~ 28028670 (-)
LOC103026702 hipk1,si:ch211-160o17.4,LOC108254861,LOC107680439 coding upstream 294575 28030686 ~ 28048695 (-)
G193369 NA non-coding downstream 4240 27731003 ~ 27731662 (-)
G193367 NA non-coding downstream 11797 27723860 ~ 27724105 (-)
G193223 NA non-coding downstream 229373 27488865 ~ 27506529 (-)
G193226 NA non-coding downstream 240979 27493050 ~ 27494923 (-)
G193200 NA non-coding downstream 334260 27400837 ~ 27401642 (-)
G193386 NA non-coding upstream 331363 28067474 ~ 28067681 (-)
G193411 NA non-coding upstream 429730 28165841 ~ 28166081 (-)
G193424 NA non-coding upstream 499054 28235165 ~ 28236469 (-)
G193426 NA non-coding upstream 507697 28243808 ~ 28244702 (-)
G193435 qrich1,LOC107729405,LOC107558890 non-coding upstream 581233 28317344 ~ 28318704 (-)
LOC103046149 LOC102777140,LOC108436414,LOC102208887,LOC105027122,LOC108280970,LOC103144351,LOC107751002 other downstream 34571 27425042 ~ 27701331 (-)
LOC111195340 NA other downstream 344331 27390794 ~ 27391571 (-)
G193097 NA other downstream 702813 27031663 ~ 27033089 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other downstream 1011796 26711253 ~ 26724106 (-)
LOC111195415 tfeb other downstream 1857249 25874910 ~ 25878653 (-)
tmem167b tmem167b other upstream 274880 28010991 ~ 28015612 (-)
LOC111195422 si:dkey-33m11.6,LOC108411515,LOC108255079,LOC107572850,LOC107714486,LOC107680422 other upstream 458268 28194379 ~ 28213070 (-)
LOC111195343 LOC108434908 other upstream 839996 28576107 ~ 28586222 (-)
G193541 NA other upstream 861444 28597555 ~ 28598638 (-)
G193737 NA other upstream 2429650 30165761 ~ 30180126 (-)

Expression


Co-expression Network