G193541


Basic Information

Item Value
gene id G193541
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 28597555 ~ 28598638 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU262661
agacaacacaaatatGGTAAGTAAGAGaaaggccacacccaatatgcaaatatatggtgccaggagcctatgggaaagctgtataaaacaaaaacaagactttttatgttaaactttattatttgtttttactttatacAGATTTTCTTCTTGTAAAATATCTATTATCACAATCAGGAATCAGAAGTCCGTTACGAGAACTCAGAGCTGAGCTGCCTCCAGACCCACAGTATGATGACCGGTCTACCCTGTAGGAGACAGAGTTGTAGAAGACTGGATTTGAATGGCATTCATTGTTTTCAgatactgatgttttaaaactgAAGCTATCACAGGCCTTCAGTCCATAACAGATCCAGGAACAGAGCGAGCTGAGCCGAAACCGAGGAAGTTTGGAAGGTCTGGTTCTCATATTGAAGTCAATACGTTCTTCGCAATAAGAGGCGATGAGGTTGGTGCAGCTGTTTCCTCCGGCCATTGGCAGGGAGATGGTGCTGTGGCTGCTGTGTTCATTCTCCACACTAGCCATGATCGGCATCAGATGGGCTCCTCTCTGAGGTTCCGCTTGGACCTTCTCTTGACCACTCACTACATCACTGTTGGTGTCTTCCCCAGAACTTACGGTGAGGAACCGCAGCACCACGAGGTTCATGAACGCACCAATCACGCTCAACCCAACGAGGATGTACGTGAAGGTGAAGACCACGTACAGGAGCTTCTGCTCCAGATCTCCCTTTTTCTGCAGAGCGACGAGTCCCCGAACCCAATGGTGGTGAGGGTGATGAAGCAATAATAACAGGAATGGAAAAAGCTCCAGCCCTCAAAATGCGAGAAGGCTGCTGCCCCCACACACAGTGTACTCAAGCAGGTCAGGAAGCCCACGAAAACCATGTGCCACATGGATACGTCAGTCTTAAGCAGACCTAGGCACCGGCCTGTTCTGTCCATCACAGAGCGGAAGAGCATGTTCATGCGTTCACCAGTGCTCTGGAACATGACAAGAGTTAGCGGAATGCCCAGGAGAGCATAGAGCATGCAGAAGACTTTCCCAGCTTCTGTTCGAGGATATGAATGGCCATAACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU262661 True 1084 TUCP 0.48 1 28597555 28598638

Neighbor

gene id symbol gene type direction distance location
LOC103046446 LOC108436063,LOC107728611,LOC107656039,LOC107600301 coding downstream 26613 28546579 ~ 28570942 (-)
LOC103043100 ncoa3,LOC108436109,LOC108255004,LOC107717960 coding downstream 89999 28459080 ~ 28507556 (-)
LOC103024327 NA coding downstream 268267 28323355 ~ 28329288 (-)
LOC111195424 NA coding downstream 289507 28302568 ~ 28308048 (-)
LOC111195423 NA coding downstream 296547 28296305 ~ 28301008 (-)
LOC103042433 taf4,LOC108436032 coding upstream 553083 29151721 ~ 29173495 (-)
LOC103040895 LOC108436021 coding upstream 578708 29177346 ~ 29219008 (-)
LOC103042113 LOC103042113,LOC108435091 coding upstream 634874 29233512 ~ 29254829 (-)
LOC103040276 NA coding upstream 671283 29269921 ~ 29278564 (-)
cse1l cse1l,LOC107750990,LOC107699361 coding upstream 681512 29280150 ~ 29291603 (-)
G193540 NA non-coding downstream 1548 28595651 ~ 28596007 (-)
G193477 NA non-coding downstream 127947 28395697 ~ 28469608 (-)
G193435 qrich1,LOC107729405,LOC107558890 non-coding downstream 278851 28317344 ~ 28318704 (-)
G193426 NA non-coding downstream 352853 28243808 ~ 28244702 (-)
G193424 NA non-coding downstream 361086 28235165 ~ 28236469 (-)
G193568 NA non-coding upstream 277279 28875917 ~ 28930921 (-)
G193637 NA non-coding upstream 577276 29175914 ~ 29176124 (-)
G193638 NA non-coding upstream 577817 29176455 ~ 29176865 (-)
LOC111195426 NA non-coding upstream 629066 29227704 ~ 29232967 (-)
G193642 NA non-coding upstream 665336 29263974 ~ 29266389 (-)
LOC111195343 LOC108434908 other downstream 11333 28576107 ~ 28586222 (-)
LOC111195422 si:dkey-33m11.6,LOC108411515,LOC108255079,LOC107572850,LOC107714486,LOC107680422 other downstream 384485 28194379 ~ 28213070 (-)
tmem167b tmem167b other downstream 581943 28010991 ~ 28015612 (-)
LOC103046149 LOC102777140,LOC108436414,LOC102208887,LOC105027122,LOC108280970,LOC103144351,LOC107751002 other downstream 896224 27425042 ~ 27701331 (-)
LOC111195340 NA other downstream 1205984 27390794 ~ 27391571 (-)
G193737 NA other upstream 1567123 30165761 ~ 30180126 (-)
spcs1 spcs1,LOC107680421,LOC107744856 other upstream 2211156 30809794 ~ 30830957 (-)
LOC103037496 mustn1,LOC103037496,LOC103359875,LOC107091502 other upstream 2571660 31170298 ~ 31194049 (-)
trnae-cuc_20 NA other upstream 2576169 31174807 ~ 31174878 (-)
cadps cadps,LOC107549847 other upstream 2852165 31450803 ~ 31654210 (-)

Expression


Co-expression Network