pank4 (pank4,LOC107742899)


Basic Information

Item Value
gene id pank4
gene name pank4,LOC107742899
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 8141553 ~ 8175170 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228504.2
GCTGCGTTTGCAAAACAAGCGGTGGAAGATGGCGACGCCCGGAGGGACGAACAGAGCTTCCCACAGTCTGGATAAGAGCATTACTCTCCCACCAGACGAAATATTCCGCAACCTAGAGAACGCCAAGAGGTTCGCAATAGATATAGGTGGTTCTCTGACGAAGCTCGCCTATTACTCCACTGTTCAGCACAAAGTAGCCAAAGTTAGATCATTTGATCACACAGCAAAAGCAGGAGTTCAGCAGGAAGCAGATGGAGAGCCGCTTTATGAGATATCCGTACAGGAGGAGATCACTGCTCGCCTTCATTTCATCAAGTTTGAAAATACGTATATTGAAACATGTCTGGATTTCATTAAAGATCATCTAGTTAACACAGAAACCAAAGTCATCAAGGCCACAGGAGGCGGGGCTTACAAGTTCAAAGACTTAATTGAGAAGAAATTGAAACTCAAAGTGGACAAAGAGGATGAGATGAGCTGTCTTATCAAAGGCTGTAACTTTGTGTTAAAGAACATCCCCCACGAAGCCTTCGTTTACGCAAAGCATGCAGACTCGGAATTCCGTTTCCAGAACACGCGCCCAGACATCTTCCCTTACCTGCTGGTTAACATTGGTTCTGGGGTTTCTATTGTCAAGgTTGAATCAGAGGACAAATTTGAGCGCATTGGTGGGAGTTCTATTGGAGGTGGTACCTTCTGGGGTCTTGGAGCTTTGCTCACAAAAACCAagAGATTTGATGAGCTTTTGCAGTTGGCCTCCAAGGGGCAGCATACCAATGTGGACATGCTGGTGAAGGACATCTACGGGGGTGCATACGGCTCTTTAGGGCTGACTGGTGACCTCATAGCAAGCAGCTTTGGGAAATCTGCCACTGCAGACAAAGAGTTCTCCCAAGAAGACATGGCCAAGAGCCTGCTGCATATGATCAGCAATGATATCGGGCAGCTGGCCTGCCTGTACGCCCGACTGCACAACCTGAACAGAGTGTATTTCGGAGGATTCTTCATTCGCGGGCATCCAGTCACCATGCACACCATCACCTACAGCATCAACTTCTTCACCAAGGGGGAGGTGCAGGCTTTGTTTTTAAGACATGAAGGCTATCTAGGTGCTATTGGGGCCTTTCTGAAGGGAGCAGAGGAAGACAATCCTAACCAGTACAGCTGGGGGGAGAACTATGCTGGCAGCTCAGGCCTGATGAGTGTAtccccagacctgaacccaatgcAGAGAGCTCGCAGCGGCACGTTTGACATGCTGGAAATGGACCGTTTGGAGAGACAGCTGGTGAATCTGCCGCTTCTGCAGGACCCCTCCTCCTACATCCCAGACACTGTGGACCTGACCGAAGACGCCCTGGCCAGAGAGTACTGGCTCTACTGTTTTGAGGAGGCGCTGGATGGGGTGGTAAAGCGAGCAGTAGCCAGCCAGAAAGATCAGCCTGAGGCCGCGGAGAGGGCGGAGAAGTTCCGGCAGAAGTACCGGCACAAGCTGCAGACCCTCCGCCACCAGCCTTTTGCTTATGGATCCCTCACTGTGCGGAGTCTGCTGGACACAAGAGAACATTGTCTGAACGAGTTTAACTTTCCTGACCCCTATTCTAAGATAAAGCAACGGGAGAACGACATGGCGCTGAAATATTACCAGAAGGTGGTGAGGTCTCTGGAGGAGCTGAGCTGGGAGCAAAGACAGTTTGCACTGGTTAGAGGCATTCTGGCTGGAAACGTCTTCGACTGGGGAGCCAAAGCTGTCTCTGATGTCCTTGAATCAGATCCAGAGTTTGGGTTTGAGCAGGCAAAGCAACAGTTACAAGAGCGACCTTGGCTTGTGGATGCTTATAACCAGTGGGTTGAAAGGCTAAAGGGTCCTCCTCATAAATGTGCGTTGTTTTTCGTAGATAATAGTGGAATGGACATAATTCTGGGAGTTTTTCCTTTTGTAAGAGAACTCCTCCTCAGAGGCACAGAGGTGGTTCTTGCCAGTAACTCAGGACCTGCTCTAAATGATGTGACTAACAGTGAGCTGCAGATTGTCACTGAGAGAATAGCTGCTATGGACCCTGTAATCCAGACTGCAGTGAAAGAGGAGAGGTTAATATTAGTTCAGAGTGGATCCAGTTCTCCCTGTTTAGACTTGAGTCGGCTGGATAAAGTCCTGGCCACAGTGGTGCGTGAGCGCGGCACGGATTTGGTGATCATAGAAGGCATGGGCCGCGCCATCCACACCAACTACTACGCCATGCTGAGCTGCGAAAGCCTCAAACTGGCCGTCATCAAGAACTCCTGGTTGGCCGAGCGGCTCGGAGGCAAGATCTTCAGCGTGGTCTTCAAGTACGAGGTTCCTTCCAAAGCCCAGGGGCTGCATTGAAGCATCGCTTGTGTTTTTCTGTGCGCTCATCTCAATTGGGAGGTTATCATGGTGAGCACTAGTAGGCCCCTGTAAGAGCACCCCAGTCACTTCTGTGCCTCTGCACCGCTCCTTCAGATTGACGTGATGATTGTATTCTGCGATGGTGgaattctttattattatttttttttgtctttcttttttttccccaatccAAATCAATAATAAGTGGGCCTGCTATGAAATTGAATGTGCTTCTTAAATGACCACTGTTATTATATTTGGATGGCAGGGTTTTCAAGTTtcgcttttttttctttattcttttattttgtgatGAGATTGAATTCAATTGTTCTCCATCGCTTCGAGACGCCCCACGGGATTCAGAATGGCAGGAAATGACTTGGTGAGATTTCAGTTCGGCAGCTCCTGTGGCTGAAGCCTTAGATAAACCCACCGATGTTAAgcaaacatcaatttaaaaccAATCAATACAGTAGATATATAAAGGCAATTGTTTTACAGACCCTCTTGgtgaaaacatcaaaaaataaCAGGCGTCTCTTTCTGTGCAGAGTTCTTTGCAGCGCTTTCTCAGTGTTATACAAcacggttttgttttttttgtctcatttgtagtggtgggaatcacagggcatctcacaatacaatatcaCTATACGTTTTCCACGATAtagatgatatcacaatactgcgGTTCTGCAATAATTAATATATGTCGCAAAACAATTCCCtatgatacttcacagcatctctCTTAcggaagaggataaaatactcctaaataagtaaataacaggaattatggattatTGGTTATTGGTTAGTTTCACCCAATTTCTACTAGAACTAATATTCTTAACTATAGGTTAACCCTAATTGTtcgattatagcgccaccatgtggagtaatgtagtagtaactttagtaagtaaAATTGTGGGgcgagtcttagggagtttagagtgcctagacctgtcacaataattacattatggaCTAAAACAAtcgaacatgacctcaatcattttaatgattttgacGTTGTCCATTGTGGTCCCTTTTTTGCAAACCAGTTTCAGAAGAACCAAGGCTGCATAACAGAATATGTCGTCAACAGAAGAAGTTGCACACAGCAGCCCTCAGTTCACACTGAAAAATTTTTCTGAAAAACTGGGAACTTCCACTACCTATTTCCTTTGGTGGAAATGAGCCaaacggttcaaaattaggtgtgTGAACTAGAACGAagaaagtttattgtctttaacaAGGAGTAATGTCTTTGTCatgatattatgttatcattatattagtggcataaaatggtcttaaaatccCAATAATAATATAGATAAACATTGATAAAGTATTGATATTCATATagtattgatatattgtcccactcCCACTCAAAACTTCAAAAAGCTTATAGCTGCCTTCTGTGTGAATAGGTGTCCTCCTCACATACGTATATCGATGTGATTCAATTCtagttgaactttttttttttttttcagacgaCAGCATGTTGCTtcacagtagggctgcaactgatGATTATattggtagtcaactaatctgatgattaatTGATTAGTCATTAATTATTTAGTCAGCAAATATCTCTGCCACTCCCCCCTCTCATTTTAAAACACAAGAAACATCTGAACATGGAATTTAAATGCCCAgaatgtttatgtttaaatatgaaatgttctgatattaacaagtaaacatgtaatcTGTTGCGTTTGGACACTTTTGGAGACGCAGaccaagttgagtgtaaactgtgtgagtgagcacaTAATAACTCTCCTCCACTGCAGTTCTTTCCCCAGGTTCGTGTGTAGTGCAGTGCTGTTACAAATTAAGGATGATACCACAGTTGGTTCTGACcgtgcaatgtgattggc
>XM_022682349.1
GCTGCGTTTGCAAAACAAGCGGTGGAAGATGGCGACGCCCGGAGGGACGAACAGAGCTTCCCACAGTCTGGATAAGAGCATTACTCTCCCACCAGACGAAATATTCCGCAACCTAGAGAACGCCAAGAGGTTCGCAATAGATATAGGTGGTTCTCTGACGAAGCTCGCCTATTACTCCACTGTTCAGCACAAAGTAGCCAAAGTTAGATCATTTGATCACACAGCAAAAGCAGGAGTTCAGGAAGCAGATGGAGAGCCGCTTTATGAGATATCCGTACAGGAGGAGATCACTGCTCGCCTTCATTTCATCAAGTTTGAAAATACGTATATTGAAACATGTCTGGATTTCATTAAAGATCATCTAGTTAACACAGAAACCAAAGTCATCAAGGCCACAGGAGGCGGGGCTTACAAGTTCAAAGACTTAATTGAGAAGAAATTGAAACTCAAAGTGGACAAAGAGGATGAGATGAGCTGTCTTATCAAAGGCTGTAACTTTGTGTTAAAGAACATCCCCCACGAAGCCTTCGTTTACGCAAAGCATGCAGACTCGGAATTCCGTTTCCAGAACACGCGCCCAGACATCTTCCCTTACCTGCTGGTTAACATTGGTTCTGGGGTTTCTATTGTCAAGgTTGAATCAGAGGACAAATTTGAGCGCATTGGTGGGAGTTCTATTGGAGGTGGTACCTTCTGGGGTCTTGGAGCTTTGCTCACAAAAACCAagAGATTTGATGAGCTTTTGCAGTTGGCCTCCAAGGGGCAGCATACCAATGTGGACATGCTGGTGAAGGACATCTACGGGGGTGCATACGGCTCTTTAGGGCTGACTGGTGACCTCATAGCAAGCAGCTTTGGGAAATCTGCCACTGCAGACAAAGAGTTCTCCCAAGAAGACATGGCCAAGAGCCTGCTGCATATGATCAGCAATGATATCGGGCAGCTGGCCTGCCTGTACGCCCGACTGCACAACCTGAACAGAGTGTATTTCGGAGGATTCTTCATTCGCGGGCATCCAGTCACCATGCACACCATCACCTACAGCATCAACTTCTTCACCAAGGGGGAGGTGCAGGCTTTGTTTTTAAGACATGAAGGCTATCTAGGTGCTATTGGGGCCTTTCTGAAGGGAGCAGAGGAAGACAATCCTAACCAGTACAGCTGGGGGGAGAACTATGCTGGCAGCTCAGGCCTGATGAGTGTAtccccagacctgaacccaatgcAGAGAGCTCGCAGCGGCACGTTTGACATGCTGGAAATGGACCGTTTGGAGAGACAGCTGGTGAATCTGCCGCTTCTGCAGGACCCCTCCTCCTACATCCCAGACACTGTGGACCTGACCGAAGACGCCCTGGCCAGAGAGTACTGGCTCTACTGTTTTGAGGAGGCGCTGGATGGGGTGGTAAAGCGAGCAGTAGCCAGCCAGAAAGATCAGCCTGAGGCCGCGGAGAGGGCGGAGAAGTTCCGGCAGAAGTACCGGCACAAGCTGCAGACCCTCCGCCACCAGCCTTTTGCTTATGGATCCCTCACTGTGCGGAGTCTGCTGGACACAAGAGAACATTGTCTGAACGAGTTTAACTTTCCTGACCCCTATTCTAAGATAAAGCAACGGGAGAACGACATGGCGCTGAAATATTACCAGAAGGTGGTGAGGTCTCTGGAGGAGCTGAGCTGGGAGCAAAGACAGTTTGCACTGGTTAGAGGCATTCTGGCTGGAAACGTCTTCGACTGGGGAGCCAAAGCTGTCTCTGATGTCCTTGAATCAGATCCAGAGTTTGGGTTTGAGCAGGCAAAGCAACAGTTACAAGAGCGACCTTGGCTTGTGGATGCTTATAACCAGTGGGTTGAAAGGCTAAAGGGTCCTCCTCATAAATGTGCGTTGTTTTTCGTAGATAATAGTGGAATGGACATAATTCTGGGAGTTTTTCCTTTTGTAAGAGAACTCCTCCTCAGAGGCACAGAGGTGGTTCTTGCCAGTAACTCAGGACCTGCTCTAAATGATGTGACTAACAGTGAGCTGCAGATTGTCACTGAGAGAATAGCTGCTATGGACCCTGTAATCCAGACTGCAGTGAAAGAGGAGAGGTTAATATTAGTTCAGAGTGGATCCAGTTCTCCCTGTTTAGACTTGAGTCGGCTGGATAAAGTCCTGGCCACAGTGGTGCGTGAGCGCGGCACGGATTTGGTGATCATAGAAGGCATGGGCCGCGCCATCCACACCAACTACTACGCCATGCTGAGCTGCGAAAGCCTCAAACTGGCCGTCATCAAGAACTCCTGGTTGGCCGAGCGGCTCGGAGGCAAGATCTTCAGCGTGGTCTTCAAGTACGAGGTTCCTTCCAAAGCCCAGGGGCTGCATTGAAGCATCGCTTGTGTTTTTCTGTGCGCTCATCTCAATTGGGAGGTTATCATGGTGAGCACTAGTAGGCCCCTGTAAGAGCACCCCAGTCACTTCTGTGCCTCTGCACCGCTCCTTCAGATTGACGTGATGATTGTATTCTGCGATGGTGgaattctttattattatttttttttgtctttcttttttttccccaatccAAATCAATAATAAGTGGGCCTGCTATGAAATTGAATGTGCTTCTTAAATGACCACTGTTATTATATTTGGATGGCAGGGTTTTCAAGTTtcgcttttttttctttattcttttattttgtgatGAGATTGAATTCAATTGTTCTCCATCGCTTCGAGACGCCCCACGGGATTCAGAATGGCAGGAAATGACTTGGTGAGATTTCAGTTCGGCAGCTCCTGTGGCTGAAGCCTTAGATAAACCCACCGATGTTAAgcaaacatcaatttaaaaccAATCAATACAGTAGATATATAAAGGCAATTGTTTTACAGACCCTCTTGgtgaaaacatcaaaaaataaCAGGCGTCTCTTTCTGTGCAGAGTTCTTTGCAGCGCTTTCTCAGTGTTATACAAcacggttttgttttttttgtctcatttgtagtggtgggaatcacagggcatctcacaatacaatatcaCTATACGTTTTCCACGATAtagatgatatcacaatactgcgGTTCTGCAATAATTAATATATGTCGCAAAACAATTCCCtatgatacttcacagcatctctCTTAcggaagaggataaaatactcctaaataagtaaataacaggaattatggattatTGGTTATTGGTTAGTTTCACCCAATTTCTACTAGAACTAATATTCTTAACTATAGGTTAACCCTAATTGTtcgattatagcgccaccatgtggagtaatgtagtagtaactttagtaagtaaAATTGTGGGgcgagtcttagggagtttagagtgcctagacctgtcacaataattacattatggaCTAAAACAAtcgaacatgacctcaatcattttaatgattttgacGTTGTCCATTGTGGTCCCTTTTTTGCAAACCAGTTTCAGAAGAACCAAGGCTGCATAACAGAATATGTCGTCAACAGAAGAAGTTGCACACAGCAGCCCTCAGTTCACACTGAAAAATTTTTCTGAAAAACTGGGAACTTCCACTACCTATTTCCTTTGGTGGAAATGAGCCaaacggttcaaaattaggtgtgTGAACTAGAACGAagaaagtttattgtctttaacaAGGAGTAATGTCTTTGTCatgatattatgttatcattatattagtggcataaaatggtcttaaaatccCAATAATAATATAGATAAACATTGATAAAGTATTGATATTCATATagtattgatatattgtcccactcCCACTCAAAACTTCAAAAAGCTTATAGCTGCCTTCTGTGTGAATAGGTGTCCTCCTCACATACGTATATCGATGTGATTCAATTCtagttgaactttttttttttttttcagacgaCAGCATGTTGCTtcacagtagggctgcaactgatGATTATattggtagtcaactaatctgatgattaatTGATTAGTCATTAATTATTTAGTCAGCAAATATCTCTGCCACTCCCCCCTCTCATTTTAAAACACAAGAAACATCTGAACATGGAATTTAAATGCCCAgaatgtttatgtttaaatatgaaatgttctgatattaacaagtaaacatgtaatcTGTTGCGTTTGGACACTTTTGGAGACGCAGaccaagttgagtgtaaactgtgtgagtgagcacaTAATAACTCTCCTCCACTGCAGTTCTTTCCCCAGGTTCGTGTGTAGTGCAGTGCTGTTACAAATTAAGGATGATACCACAGTTGGTTCTGACcgtgcaatgtgattggc

Function

symbol description
pank4 Predicted to enable pantothenate kinase activity. Predicted to be involved in coenzyme A biosynthetic process. Predicted to be active in cytosol and nucleus. Orthologous to human PANK4 (pantothenate kinase 4 (inactive)).

NR:

description
pantothenate kinase 4-like isoform X2

GO:

id name namespace
GO:0015937 coenzyme A biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004594 pantothenate kinase activity molecular_function

KEGG:

id description
K24265 PANK4; bifunctional damage-control phosphatase, subfamily II, fusion protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228504.2 True 4293 mRNA 0.44 19 8141553 8175170
XM_022682349.1 False 4290 mRNA 0.44 19 8141553 8175170

Neighbor

gene id symbol gene type direction distance location
LOC103023171 LOC103023171,LOC108438613 coding upstream 92736 8025007 ~ 8048817 (+)
LOC103023694 LOC103023694,LOC108438614,LOC108280988 coding upstream 130993 7828510 ~ 8010560 (+)
LOC103021633 LOC108438615 coding upstream 400723 7515747 ~ 7740830 (+)
cdk5rap1 cdk5rap1,LOC102203826,LOC102305298,LOC102194700 coding upstream 707311 7423941 ~ 7434242 (+)
rpn2 rpn2 coding upstream 731806 7395925 ~ 7409747 (+)
LOC103024538 draxin,LOC108413332,LOC106565906 coding downstream 17841 8193011 ~ 8244997 (+)
LOC103047485 rpl22,LOC103047485,LOC108414460,LOC107737211,LOC107555851 coding downstream 157012 8332182 ~ 8343347 (+)
LOC103046266 chd5,LOC107555845,LOC107691315 coding downstream 170902 8346072 ~ 8431062 (+)
LOC103024232 arhgef10la,LOC108438575,LOC107695083,LOC106565901 coding downstream 263543 8438713 ~ 8733125 (+)
klhdc7a LOC108438577 coding downstream 1660929 9836099 ~ 9839322 (+)
G188063 rap1aa,LOC106582744,LOC107751450,LOC101070080 non-coding upstream 2048 8121744 ~ 8139505 (+)
G188062 NA non-coding upstream 20925 8120330 ~ 8120628 (+)
G188051 NA non-coding upstream 91441 8049638 ~ 8050112 (+)
G188009 NA non-coding upstream 140176 8000834 ~ 8001377 (+)
G187904 NA non-coding upstream 762965 7377151 ~ 7378588 (+)
G188149 NA non-coding downstream 324994 8500164 ~ 8501035 (+)
G188178 NA non-coding downstream 595138 8770308 ~ 8771086 (+)
LOC111195453 NA non-coding downstream 643986 8819156 ~ 8820096 (+)
G188185 NA non-coding downstream 674136 8849306 ~ 8849567 (+)
G188186 NA non-coding downstream 680336 8855506 ~ 8891767 (+)
LOC111195452 NA other upstream 28311 8112003 ~ 8113242 (+)
trnaq-uug_4 NA other upstream 949327 7192154 ~ 7192226 (+)
LOC103029365 NA other upstream 1042881 7077165 ~ 7098672 (+)
p3h1 NA other upstream 2342574 5779891 ~ 5798979 (+)
G186978 rps23,rs23,LOC106566095,LOC106566598 other upstream 4746710 3392387 ~ 3394843 (+)
agtrap agtrap other downstream 81626 8256796 ~ 8271712 (+)
LOC103032765 igsf21,igsf21a,LOC108438574,LOC107749415,LOC107727841,LOC107685626 other downstream 1108625 9283795 ~ 9819955 (+)
G188325 NA other downstream 1679137 9854307 ~ 9856995 (+)
LOC111195371 NA other downstream 1926585 10101755 ~ 10106530 (+)
G188624 NA other downstream 2128190 10303360 ~ 10303665 (+)

Expression


Co-expression Network