Gene
RNA
| Item | Value |
|---|---|
| gene id | G71622 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 5810037 ~ 5811227 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU81633 | True | 1168 | lncRNA | 0.31 | 2 | 5810037 | 5811227 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_05748899_05754466 | ERLEC1 | coding | upstream | 54783 | 5748899 ~ 5755254 (+) |
| CI01000012_05708007_05735678 | MAP3K4 | coding | upstream | 74052 | 5708007 ~ 5735985 (+) |
| CI01000012_05659039_05669397 | NA | coding | upstream | 140453 | 5659039 ~ 5669584 (+) |
| CI01000012_05648602_05650699 | MYCLA | coding | upstream | 158840 | 5648602 ~ 5651197 (+) |
| CI01000012_05565127_05567009 | NA | coding | upstream | 242807 | 5564939 ~ 5567230 (+) |
| CI01000012_05856793_05862577 | NA | coding | downstream | 45089 | 5856316 ~ 5862642 (+) |
| CI01000012_05909453_05916000 | MEMO1 | coding | downstream | 98226 | 5909453 ~ 5916174 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | coding | downstream | 111158 | 5922385 ~ 5929186 (+) |
| CI01000012_05946986_05984551 | SLX4IP | coding | downstream | 135759 | 5946986 ~ 5985959 (+) |
| CI01000012_06156417_06175135 | NA | coding | downstream | 343620 | 6154847 ~ 6175521 (+) |
| G71619 | NA | non-coding | upstream | 3252 | 5806521 ~ 5806785 (+) |
| G71618 | NA | non-coding | upstream | 3974 | 5805801 ~ 5806063 (+) |
| G71585 | NA | non-coding | upstream | 41268 | 5766075 ~ 5768769 (+) |
| G71595 | NA | non-coding | upstream | 70353 | 5739016 ~ 5739684 (+) |
| G71607 | NA | non-coding | upstream | 136780 | 5673042 ~ 5673257 (+) |
| G71623 | NA | non-coding | downstream | 2290 | 5813517 ~ 5816605 (+) |
| G71637 | NA | non-coding | downstream | 31837 | 5843064 ~ 5843554 (+) |
| G71668 | NA | non-coding | downstream | 109966 | 5921193 ~ 5921399 (+) |
| G72484 | NA | non-coding | downstream | 216467 | 6027694 ~ 6027911 (+) |
| G72499 | NA | non-coding | downstream | 245997 | 6057224 ~ 6057425 (+) |
| G71548 | NA | other | upstream | 248604 | 5550493 ~ 5561433 (+) |
| G71221 | NA | other | upstream | 269581 | 5538525 ~ 5540456 (+) |
| G71218 | NA | other | upstream | 271653 | 5535852 ~ 5538384 (+) |
| G71199 | NA | other | upstream | 393252 | 5413250 ~ 5416785 (+) |
| CI01000012_05177587_05180517 | SRSF5A | other | upstream | 629067 | 5176895 ~ 5180970 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | downstream | 1994876 | 7805248 ~ 7811902 (+) |
| G73578 | NA | other | downstream | 2555579 | 8366806 ~ 8367627 (+) |
| CI01000012_10223957_10235955 | NA | other | downstream | 4410728 | 10223697 ~ 10236276 (+) |
