LOC103045076 (gpr25)


Basic Information

Item Value
gene id LOC103045076
gene name gpr25
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 23159668 ~ 23162419 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007234744.3
AGTGAGATAAAAAGTTATAAGCTTGAGTTGTAAATGTAGTGGAGTTATTTAGTGGAATTAAGTACTTAATTAAATTTATATCATTACTGTCCAGAACTGCAGGTAAGATAAGTTGAATCAGCTAGATAAGTTTGATAATTGAGTTGATTGATTTGATGAAGAAAGTGCGAGATAAGCAAGATGCTTctgacaaacagagagagacagcaggtCAACAGAAACGAGATGTTGCAGTTGTGGTTTGTAAGCATGTGACTGAATGGGTTTTCTTTCCTTTGCCAGTCTGAAGAGCACAGATGGCACGCAGCAGCACCTCAGCAGCCTTGTCTCGACACACAATGGACAACTCAACCCCCAGCCCATACGAGTACGACTACAACTTCAGCGGTGATGATGATTTGAATGACACCAGCACCACCGAGGTTCTGTACATGTCCCACGTCTACCTGCCCATGCTTTACTTTATCGTGTTCTTTGCCGGATTCTCAGGCAACCTCTTTGTGCTTATTGTCATTGGCAACCGTCACAAGAGGAGCAGGCGGCTGGTGGACATCTTTGTGCTGAACCTGGCTCTGGCTGACCTGGTCTTCGTCTTCACCCTGCCTCTGTGGGCCGTTGCAGCCGGGCAGCACCACCGGTGGCCCTTCGGTAGAGTCATGTGCAAGATCAGCAGCTACATCATAGCTGTCAACAGGTTCTCGAACATATTCTTCCTCACCTGCATGAGTGTAGACCGCTACCTGGCTGTAGTACGCCTCATGGACTCCCACGTCCTCCGCAGTAGCAGGTGCGTACACCTTACCTGCGGGGTGGTGTGGGGAGTGTCTCTGCTCTTGGGGGTGCCCTCACTCGTCTACCGACACCTGAGTGAAGAAGATGATGGCAGTTCCTGCATCGACGACATGGACTCGCTCTTCTTCAAAGCCATGATCCTGCTGACCGGCTTCCTCACATTCATGCTGCCTGTGCTCATCATCGTCCTGTGCTACGGATCCATCCTGGCCAAACTGCGCAAGCACTCCATCTCCGCCGGGAACCAACGAGCCGAAGCCAGGCGCCGACACTCGCTCAAGATCGTCTTCACCATCATCACCGCATTCCTGGTGTCATGGCTGCCGTACAACGTCTTCAAGACCATCCAGGTGATCTCCAGCATGAGCGACACCAGCCTGGGCGACGCCGTTCAAGAGAACCTGAGCCGAGGGCTCATCATCTCCTCCTGTCTGGCCTTCGTCAACAGCTGCATCAATCCCGCCATTTACCTGTCGCTGGATAAGCATTTCCGGCGTAGCGCCGCGGCGCTGTGCCTGAACTGCCTGGGTCACGGAGATGCACAGCACAGCTACGTCTCCTCCAACTCCTTCTCCAACGCCACGTCTGAGAGCCTGGGCAGTGTGCCCAGCCGTGGGCGCCTGTTCTCTCTAACTCAGAAGACCTGAATTGGACTTTAGGCCTGACCTGTTCATGCATTATTCACTTACAGCTTCAGCGTTTAGCGCTTTTTTAGAGGAATGCTGTAAAACATTGACCTCAAACAGAGATCGGTTTTCAATGGTACGTATTGTAAagtttttatcagattcatAACAAACCTTTTAATATATTCACGCTTTTAAGCACGTCAGTTTCCGAACAAGTCTGTGATATACTGTTATGAGTCAAGAGACTTTTTTCATTCAGGTTCTTTATGAGCATTACAAGAcatttacagcttttaaatgtggTTTTCTGAGCTCTATCTCTAAATTGCAGAAGGGAAACGTGCAAAACCCCCAACGGCGCCCCAAGCCCTTTCCTCTCAGACAGCTTCAGACAAGTCAGTCACAGCTgggattttttaaatgtgcatttAAAATACAATCTTGCATTTGACTCAAACACTGATTTGCtaacaattttaaatgttttattttaagcttaTCTAAACCCCACAGGGTTTAATCCTAGGTCCTGCGAACattttaaagataaagataaaactaTCTGAGCTACAGGGTCTAAGGGGTGGGGCTGTTTTAAACATATCCTtgttttaatatatactgtaggagataaaaataaaaaaagaaaaatcgaaaaagaaaatgataataataatattccaaaataaaaaccttactgtctttttttgttgtctATAGTGTTTTAGAATAGTAGCAGGTTTACTCTCACCAATGTGAAAGCATTTATGTACATAGAAATAttgtgaatattttatattttagcatattttttttcatacagggttctatttttattagatataaaatgtattttaattattacaattCTATCATTTTAAAAGGGAAAACAATATGTGCCAACAGGTTAAACTGTTCTAATTATACCTTtggttttaataatttaattattaacctttggtttaaaaataatataatataataataatattctacaAAAACAACTAttctaatataatgtaatacttttttgttactttatgATAATGGAAAGTCTGTCAGTCTGATCTGTGCTGTTACTGCTGGTTATGCACACCTTTCATTCAATTCCTTTCATTTCATGTTTACTTTCACTAATATATAATCCAatgcattcatttaaaatgattttctacttgttttctttgtgttgttttaattttgCAATATTGTATCAAATCAgtcttttattttgtcttgtcATGTATTTATGCTCTGTAGTGTcagtgatttattgatttgtgATTTGCTGTGTATTTTCTGTCTGACATcgaataaaactataaaacaga

Function

symbol description
gpr25 Enables apelin receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Located in plasma membrane. Orthologous to human GPR25 (G protein-coupled receptor 25).

NR:

description
probable G-protein coupled receptor 25

GO: NA

KEGG:

id description
K08405 GPR25; G protein-coupled receptor 25

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007234744.3 True 2752 mRNA 0.42 1 23159668 23162419

Neighbor

gene id symbol gene type direction distance location
c22h1orf106 LOC108410711,LOC107727857,LOC107655074 coding downstream 15260 23104254 ~ 23144408 (-)
rnpep rnpep coding downstream 61104 23087526 ~ 23098564 (-)
LOC103045443 LOC108410710,LOC107727873,LOC107560790,LOC107685706,LOC107749489 coding downstream 77540 23074119 ~ 23082128 (-)
LOC103044418 adipor1 coding downstream 87466 23063167 ~ 23072202 (-)
rabif rabif,LOC107601129,LOC107581890,LOC107749491 coding downstream 122876 23033475 ~ 23036792 (-)
LOC103047010 syt6,LOC107727826,LOC107560238,LOC107655078 coding upstream 46466 23208885 ~ 23282019 (-)
nfs1 nfs1,LOC107601922,LOC107559867 coding upstream 446834 23609253 ~ 23622118 (-)
LOC103042624 rbm39,LOC107655082,LOC107727761,LOC107602070 coding upstream 462491 23624910 ~ 23635826 (-)
LOC103041805 gem,rem1,LOC108411381,LOC107727768,LOC107655086,LOC107727184,LOC107685743,LOC107554936 coding upstream 485847 23648266 ~ 23660292 (-)
LOC103042306 NA coding upstream 510689 23673108 ~ 23680391 (-)
G192293 NA non-coding downstream 4626 23154582 ~ 23155042 (-)
G192288 NA non-coding downstream 54041 23105108 ~ 23105627 (-)
LOC111195460 NA non-coding downstream 58680 23098838 ~ 23100988 (-)
G192240 NA non-coding downstream 128598 23030652 ~ 23031070 (-)
G192232 NA non-coding downstream 196859 22961247 ~ 22962809 (-)
G192335 NA non-coding upstream 53171 23215590 ~ 23223369 (-)
G192336 NA non-coding upstream 53757 23216176 ~ 23224603 (-)
G192365 NA non-coding upstream 166655 23329074 ~ 23329313 (-)
G192428 NA non-coding upstream 382116 23544535 ~ 23559176 (-)
G192439 dvl1,LOC108411373,LOC107685713,LOC107560111,LOC107749512,LOC107655081,LOC107727776 non-coding upstream 439900 23602319 ~ 23607031 (-)
G192251 adipor1,LOC107749488,LOC107385668 other downstream 100863 23054633 ~ 23058805 (-)
LOC103041653 phf20,LOC107655063,LOC107727854,LOC107561906 other downstream 356026 22786163 ~ 22803642 (-)
amhr2 NA other downstream 436763 22709549 ~ 22722905 (-)
alas1 alas1,LOC106583798 other downstream 797210 22349347 ~ 22362458 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other downstream 1308026 21846969 ~ 21851642 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other upstream 876827 24039246 ~ 24105898 (-)
G192815 mdm4 other upstream 2049256 25211675 ~ 25217550 (-)
LOC111195415 tfeb other upstream 2712491 25874910 ~ 25878653 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other upstream 3548834 26711253 ~ 26724106 (-)
G193097 NA other upstream 3869244 27031663 ~ 27033089 (-)

Expression


Co-expression Network