G71637


Basic Information

Item Value
gene id G71637
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 5843064 ~ 5843554 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU81650
CTAAAATGGAACGTTCCCTTTACATTGTCACGATAGATTGTTGTATTAATGCGCACAACGAAAGAAGTAGAGTACAAATACAGTCTGTATTAAATCCACAAAAGAACACTCAGGAGGTCACAGGAGTAAACTAATTCTCAACCACACTAAACAAAGATGATACCAAACAAATGAACAGAATGAACTGAGAGCTTAAATACAGACAGAGAGTAATTAAAGGAAAACAAAATAAGGACAATGAAATTAAATTAAAACCAAGGAAACTAACTAGGGAACACAAGTAAATGGGAACACAGGCAAACGGGAACAGAACACAATGAAAACGAACAGCAAAACTGACAATACTCATTACAAACATTTGCATAACCAAAAAAACACTTTTCAGACCATTTAAAAAGCTGGACATTTTGAATATTTAATACATTTCGAATCAGAAATTTTATTTTCATAATTTAATGGGCATGTTAGATAACGTTCTTAGAACATTTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81650 True 491 lncRNA 0.32 1 5843064 5843554

Neighbor

gene id symbol gene type direction distance location
CI01000012_05748899_05754466 ERLEC1 coding upstream 87810 5748899 ~ 5755254 (+)
CI01000012_05708007_05735678 MAP3K4 coding upstream 107079 5708007 ~ 5735985 (+)
CI01000012_05659039_05669397 NA coding upstream 173480 5659039 ~ 5669584 (+)
CI01000012_05648602_05650699 MYCLA coding upstream 191867 5648602 ~ 5651197 (+)
CI01000012_05565127_05567009 NA coding upstream 275834 5564939 ~ 5567230 (+)
CI01000012_05856793_05862577 NA coding downstream 12762 5856316 ~ 5862642 (+)
CI01000012_05909453_05916000 MEMO1 coding downstream 65899 5909453 ~ 5916174 (+)
CI01000012_05923216_05928055 SRD5A2B coding downstream 78831 5922385 ~ 5929186 (+)
CI01000012_05946986_05984551 SLX4IP coding downstream 103432 5946986 ~ 5985959 (+)
CI01000012_06156417_06175135 NA coding downstream 311293 6154847 ~ 6175521 (+)
G71623 NA non-coding upstream 28115 5813517 ~ 5816605 (+)
G71622 NA non-coding upstream 31837 5810037 ~ 5811227 (+)
G71619 NA non-coding upstream 36279 5806521 ~ 5806785 (+)
G71618 NA non-coding upstream 37001 5805801 ~ 5806063 (+)
G71585 NA non-coding upstream 74295 5766075 ~ 5768769 (+)
G71668 NA non-coding downstream 77639 5921193 ~ 5921399 (+)
G72484 NA non-coding downstream 184140 6027694 ~ 6027911 (+)
G72499 NA non-coding downstream 213670 6057224 ~ 6057425 (+)
G72516 NA non-coding downstream 302643 6146197 ~ 6146540 (+)
G72548 NA non-coding downstream 341993 6185547 ~ 6185835 (+)
G71548 NA other upstream 281631 5550493 ~ 5561433 (+)
G71221 NA other upstream 302608 5538525 ~ 5540456 (+)
G71218 NA other upstream 304680 5535852 ~ 5538384 (+)
G71199 NA other upstream 426279 5413250 ~ 5416785 (+)
CI01000012_07806089_07811902 BEND3 other downstream 1962549 7805248 ~ 7811902 (+)
G73578 NA other downstream 2523252 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 4378401 10223697 ~ 10236276 (+)
G75533 NA other downstream 5301263 11144817 ~ 11145739 (+)

Expression


Co-expression Network