Gene
RNA
| Item | Value |
|---|---|
| gene id | G72408 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 5912308 ~ 5914599 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: heterogeneous nuclear ribonucleoprotein C-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU82597 | True | 178 | lncRNA | 0.48 | 2 | 5912308 | 5914599 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_05897865_05906600 | NA | coding | downstream | 5708 | 5897734 ~ 5906600 (-) |
| CI01000012_05889930_05893764 | NA | coding | downstream | 18544 | 5889930 ~ 5893764 (-) |
| CI01000012_05873142_05884821 | NA | coding | downstream | 27487 | 5872644 ~ 5884821 (-) |
| CI01000012_05847700_05849782 | NA | coding | downstream | 62152 | 5847486 ~ 5850156 (-) |
| CI01000012_05810254_05833540 | THBS2A, THBS2 | coding | downstream | 78558 | 5810050 ~ 5833750 (-) |
| CI01000012_05932523_05940218 | MKKS | coding | upstream | 17890 | 5932489 ~ 5940218 (-) |
| CI01000012_05988471_06021245 | JAG1B, JAG1 | coding | upstream | 72217 | 5986816 ~ 6021529 (-) |
| CI01000012_06147833_06153076 | NA | coding | upstream | 233096 | 6147695 ~ 6154203 (-) |
| CI01000012_06406744_06433128 | TASP1 | coding | upstream | 492145 | 6406744 ~ 6433128 (-) |
| CI01000012_06496870_06580459 | NA | coding | upstream | 581544 | 6496143 ~ 6580919 (-) |
| G72403 | NA | non-coding | downstream | 164597 | 5747492 ~ 5747711 (-) |
| G72402 | NA | non-coding | downstream | 165034 | 5747045 ~ 5747274 (-) |
| G72368 | NA | non-coding | downstream | 193288 | 5711572 ~ 5719020 (-) |
| G72367 | NA | non-coding | downstream | 202135 | 5695997 ~ 5710173 (-) |
| CI01000012_05672517_05674075 | NA | non-coding | downstream | 237673 | 5672229 ~ 5675834 (-) |
| G72406 | NA | non-coding | upstream | 1037 | 5915636 ~ 5917433 (-) |
| G72623 | NA | non-coding | upstream | 225781 | 6140380 ~ 6140635 (-) |
| G72626 | NA | non-coding | upstream | 229476 | 6144075 ~ 6144275 (-) |
| G72636 | NA | non-coding | upstream | 242284 | 6156883 ~ 6157118 (-) |
| G72662 | NA | non-coding | upstream | 262711 | 6177310 ~ 6177658 (-) |
| G72294 | NA | other | downstream | 446451 | 5462840 ~ 5465857 (-) |
| CI01000012_05414096_05416676 | TTC9 | other | downstream | 495528 | 5413369 ~ 5416780 (-) |
| G72204 | NA | other | downstream | 610102 | 5293773 ~ 5302206 (-) |
| G72068 | NA | other | downstream | 1132176 | 4776220 ~ 4780132 (-) |
| G71898 | NA | other | downstream | 1377636 | 4533530 ~ 4534672 (-) |
| G72629 | NA | other | upstream | 232412 | 6147011 ~ 6147494 (-) |
| CI01000012_07356934_07358497 | NA | other | upstream | 1440653 | 7356863 ~ 7358612 (-) |
| G74648 | NA | other | upstream | 2349730 | 8264329 ~ 8265654 (-) |
| G74701 | NA | other | upstream | 2452420 | 8367019 ~ 8367643 (-) |
| CI01000012_09068458_09070536 | NA | other | upstream | 3153307 | 9067906 ~ 9070765 (-) |
