LOC103026702 (hipk1,si:ch211-160o17.4,LOC108254861,LOC107680439)


Basic Information

Item Value
gene id LOC103026702
gene name hipk1,si:ch211-160o17.4,LOC108254861,LOC107680439
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 28030686 ~ 28048695 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007247722.3
aaaaagaagcgaTTCAGCCGCGAGTCGGGACAGGAAGCCTGAGTCGAGCAGCTGATAATCGGACTGGGGATGTTCCGGTGAGAGGAGCTCGTCTCCTTTAGGCTGCTGCTGTGGGTCGGCTAACGGCGAGCTAACAATGAAGGCCTAAGCCGACAGCCCCGGGATTTAAACCTCTCCGAGCTGGCTGACCAAACGAGGACAAACACACGCAGGCATGGCCTCCCAGCTGCAAGTCTTCTCTCCTCCGTCCGTGTCTTCCAGTGCCTTCTGCCGGGTCAAAAAGATGAAGGTGGAGAGCTGCGCTTGGGATGCCTCCGGTGAAGCCTACGGCTCTGTGGGCCAAGCCTACGGCTTCAACCCTGCCCCAGCTCTCCCTTTCAACACCTCCGGCCTGGTCTTCCCACCGCCTCCCGGTGCCAAGGTGGTGGTCCGTGCCGCAGACAGTACGGGGGGAGCACCGCAGGGCTCCAGCCGCCGGCCCACAGACACGCATGTGTCCCGCAGCCAGAGGTATGGTGTGAAGCGGAAGAACGAGGAGGTGGATCGGTCTGGAGGCGGGGGCAGTGGCAGCGGAAGCGTGCAGATTCTGGAGGAACTGTCTGCCCCGGCTTACTCGGGCCGTGCTGCCGGCGGCAACACCACCCAGTCCATTCCCCACTCTGCTCCCACCACCAAGAGCAGCAGCTCCAACGGCGAAGGGGACTACCAGCTCGTCCAGCATGAGATCCTCTGCTCGGTCTCAAGCAGCTACGAGGTGCTGGAGTTCCTCGGCCGGGGTACCTTCGGGCAAGTGGCAAAGTGCTGGAAAAGGGGCACCAATGAAATCGTGGCCATCAAAATATTGAAGAACCATCCTTCATATGCACGACAAGGCCAGATAGAGGTGAGCATTTTGAACCGTCTAAGTGCAGAGAACGCGGATGAGTTCAACTTTGTGCGCTCGTACGAGTGTTTCCAGCACAAAGGCCACACATGCCTGGTGTTTGAGATGCTGGAGCAGAACCTCTACGACTTCCTGAAGCACAGCAAGTTCAGCCCCCTCCCTCTACGCCACATCAGACCCATCCTGCAGCAGGTGGCCACTGCCCTGATGAAGCTCAAAAGCCTCGGCCTGATCCACGCCGATCTTAAGCCAGAGAACATCATGCTGGTGGACCCCATCAGGCAGCCCTACCGGGTCAAAGTCATCGACTTTGGATCGGCCAGTCACGTGTCTAAGGCGGTGTGCTCTACTTACCTGCAGTCTCGCTACTATAGAGCTCCTGAGATCATTCTTGGCCTGCCGTTCTGTGAAGCTATCGACATGTGGTCACTGGGCTGTGTGATTGCGGAGCTCTTCCTCGGATGGCCGCTGTATCCCGGAGCTTCTGAATATGATCAGATCCGGTACATTTCTCAGACCCAGGGACTTCCAGCAGAGTATTTGCTTAGTGCTGGCACAAAGACCTCCCGCTTCTTCCACAGAGGGCCTGACTCCAGTTATCCACTGTGGAGGCTGAAGACTCCATCAGAGCATGAGGCAGAGATGGGCATCAAGTCCAAAGAAGCGCGAAAGTACATCTTTAATTGCCTGGATGACATGATGCAGGTCAACCTGTCTTCTCACTTGGAGGGCACCGACATGCTGGCAGAGAAAGCAGATCGGCGGGAGTTCATTGATCTGCTAAAGAGGATGCTCCGTTTGGATGCTGACAAAAGAATCACCCCTACCAAGACCCTGGCCCATCCCTTTGTCACCATGAGCCATTTGCTGGACTTcccccacagctcccaTGTAAAGTCATGTTTCCAAAACATGGAGCTGTGTAAGCGGAGGAACAGTAGCTACGATAATGGGAAGGCTCTTTTTGCTGCTAATACTGTTCCTGGCACAGGGGGCAACCTGACGGTGACCTTCAGCAGTCAGCTTAACCAGAACAACCAGGTTCCTTCAGCCGGTGGAGCAGTTCCTCTCCTCAACTACCAGCCAGCCCTTTATCAACAGGCCACGATAAACATCCCAGGCCTGGCCCAGCCCACCATCCCCCTGCAGACACGCCCCCCTCAGCTATGTCCCCAAACTGAGCCCTTCCAGCAGACCCTCATTGTCTGCCCACCCACCACCATACAGGGGCTTCCGTCCTCCAGCAAGACCTCCAGCTACCCGGTCAGGATGGAAAACGGTGTTCCTGTAGTCCAGCAGAGCCAGAATACTCAGCCTCTCCAGATTCAACCAGGAATGCTGACGCAGGGATCCTGTACACCGCTGATGGTGGCCACATTGCATCCCCACGCGCCGGGCGTGTCATCTCAGTACCCGCTGCCCCTGGCACTGGGCTGTGGGGCAGGAAGGCCTtctctgctggagcagacagCCACCGTGCTGCAGGCCTGGCAGACGGGCACGCAGCAGATCCTCCTCCCCCCTGCCTGGCAGCAGGTGCCAGGAATGACCCTTCATGGCACGGGCGCAGCACAAACCATCACAGAATCGCCCTTGGAGACCATCCTCTCAGACAGCTCCACGCAGCAGACGCCCACCTGGAGGGCATCTCACAGTACAGTTCTCCAGCAGAACCCTCATGTTTTGGACTCAACTCAGTCCCTCAACCGCGGAGTGTCTAGCGCTGCTCGGTCATCGCAAAGCAAGAGGAACAGGGCTCGCTGCATGGACAGCAGCAGtgGTCTGGTTGGTGCGTCTTACAACAGCGCTGCCCTGTCTCAGCCGATCATCATCTCTGACACACCCAGCCCTGCTGTCAGCGTGATCACAATCCACAGTGATTCTGATGAGGAGGATGAGAGGAAGTTCCACCCTGCCAGCTGTGGACCTAATCAGAGAGCCAACGTCATCAGCTGTGTGACCGTCCACGACTCTGACTCCTCCACTGCTAGCCCCCTGACCCCCCTGCCCCGAAATGGCCTGGCAGCTCAGTCCTTGCGCCTGGCGAAGTCCTTGGCAGTTGTTGCTCCCTCTGTGAAAATCCAGCTAGGAGACAGCTCGGCACTAGCCAAAGTAGCTACAGGAGTTCTGCAGAGTTCCTACATAAAGCCCAAAAGGGCAGCAACACGGCAGCCATGCAGCTCAGGGGAAAGTGTCGGTCGCCAGGAGCCTAGCAGGTCCCAACCACTCAACCTGAGCCAGACCACGGTCTCATCATCTCAAGACCACACTAGTGGCTCCACACTGCGCCGGCAGCAGACCTACCCGCCTTCCTCCTCCCAGTACCGCCTCCAAGAGGCCCTGCCATTCACCAGCGCCCCTAGTCTGTACACGTACCCAGCGTCCGCAGCACTGGCCTCTGCCTCGCACACCATGGAGCAGCTGCTCGTCCAGGGCTCCTCCCCTTCCATCCACGTCCCGCCCACCAGTCACTATGCAGCCAGTCTTATCCCGAAAGACTCGGTGGGCGGCGTGGTCCACGGATTGCCCGCCCACTACCAGCAGCATTTCCCTACCCACCCTTATGTTGGCgcaaacaccagcagcactagAGGAAGTGCGGCCTATGGTGGCTATCAGCTCAGTCCTAGAAGAGTTACTCACTACCCGTACATATGAGGTGAGGCACATAGTAGAGAGGGCTGACTGAGGCGTAGTTACCAACCGAGATAGGACCACATCCTTCTTATAGACTTGCCATTGAAACTGCTGCGACATTAACTGCTATTACCTATTATTTAATTGaactattttagttttttttttttttagttttttttttttaaggttgacatttagaaatattatattttaccgGTCTCTGTTTGTATCCTTCCTCTGGAAAAGAAGTTCTGTTATCTGTTAGGGTCAGATTTATTTTCCTAGCACAATACATGTGGTGTGGTGACGTGGTGTTGAAAAAAGATGTTCATTAGCAATAGCGAGACACTATTAAAAGAAAAGCTGACACACAAAAGGGACGGACAGCTGGATCCTGGAACAGCACGACCCCCGTAGTTCATTTATGTACTACTAAATGTACTACTAAAAGTTCCACACTAACCCTGTAAAACCCTGTAATCCACTTTTGTcgattccccccccccccttgttagcttttagcatttttaatgttttgtgttttaatgttttaggtCCCACACTCTCCTGTTCtattgtttttaatcattttaaattatgttccactgttggttttattttactaatttactGGACGATGTGTATTGAAGTGACtgaaaaggaagaagaagaagaagaagaaaaaaaacgagTATCAGGAGTACGTGTGCGTACATGTAAGAGTCCACGCGCCTCCTTTACTATTTAAATCAAGACTTAAGTGTTAGTTGAATACGACGAAAGGCAAGGTAGGATTGTAGGAAGAGTTATGTTGTGCtgaaagtaaaatgataaaatgattgaTTAATAGAACTCGACCGATTTATGGGTTACTTGTCTTTAGAGTTGTTTTAATCTTGTTAAACCTTATGAATTCCTctggagatttaaaaaaaaaaaaaaaaaaaagcaagcctATACTTAAACTGTGATCATGTCAAAGCCAATGAATCAACAAAAATATGTACTGACAAAAATAATTTcccttgcctttttttttttttttttttttttaatgattcatTATGGCTTCTGAAAAACCCCGGTTTTCATCCTGTCTATCCGTTTGCTGAATTGATGTGCTGTTATGGTTCTTCTAATGCTGTTAGGAGTAGAACTTGTTTAGCAAAATGAACTAATTAACACCAAAAAAATGTCCAGTCAAAAAATCCAGGGTTCTGAGTGAACTTTTgagcatttttatttgtattttttttttttttttttttttttgctaatgccCCGTATACCTGCATCCTTTACTGAGTCTGTGTTTACATGCAGTCAGAAATCCgttcataatctgattactgcagttaTACTCTGATGTATAATTTAGGTCAGAGTAAGATTTAAGAATCTGGTCGAGGATGGACGCTAGCTCAGTAATGGTATTTCTTAGTGCTTGTAAACTCTAGTATTCTTGGATTTCTCAGTCTGTACACTCGTGAAAACAGACTGTGGTAGTGGAAAAAGCAAGTTTTCCCATTATCTGATGACCCAAGCTCATGTAAATGCATCGATCAGATTACAGAAGGTCCAGCATTTTGTAGTAATCAGATTttgaagtgcatgtaaacacactccgGATAAGCCTCATCATCATAACCCAGGCAGGTAATAAAGACATTACTGGTGTCGCAGCACTGATGATGTGTTTGTTGTATCTGCAGATATACTTTTGCTCAAAAGTACACTGGCTCAGCTACACTGTCTTACTTACTTGTTCTGCTCTCAATAAGATGATGTGCCTtgacattctctctctctttctctccatgttTTGAAGTCAAGAGTACATTTTCTCATCGACCGCAAAAGTACTGTATGCATTTTGTAACGCCAAAatcatgggaaaaaaaagaaaagtacatCAGAACACCATTGTAATACCAtccaataaacaaacacaattcCA

Function

symbol description
hipk1 Predicted to enable protein serine/threonine kinase activity and protein tyrosine kinase activity. Involved in several processes, including endothelial cell apoptotic process; extrinsic apoptotic signaling pathway; and regulation of tumor necrosis factor-mediated signaling pathway. Located in centrosome; cytosol; and nucleoplasm.

NR:

description
PREDICTED: homeodomain-interacting protein kinase 1 isoform X3

GO: NA

KEGG:

id description
K08826 HIPK; homeodomain interacting protein kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007247722.3 True 5480 mRNA 0.50 20 28030686 28048695

Neighbor

gene id symbol gene type direction distance location
b3galt6 b3galt6,LOC107592565,LOC107680432,LOC107699339,LOC107555998 coding downstream 2016 28024337 ~ 28028670 (-)
LOC103028137 LOC103028137,LOC108436315,LOC104939458,LOC108254806,LOC103386138 coding downstream 22077 27962367 ~ 28008609 (-)
LOC103045240 LOC108436365,LOC107592563,LOC107699336,LOC107680449,LOC107751004,LOC108254807 coding downstream 75634 27911675 ~ 27955052 (-)
kif21b kif21b coding downstream 155708 27757227 ~ 27874978 (-)
bcl2l15 NA coding downstream 577310 27445479 ~ 27453376 (-)
LOC103044609 acap3b,LOC108254862,LOC107680440,LOC107714502 coding upstream 17187 28065882 ~ 28162362 (-)
LOC111195421 ddx19,LOC108411521,LOC108255077,LOC107680447,LOC107699345,LOC107572851,LOC107556002,LOC105931731 coding upstream 142025 28190720 ~ 28201222 (-)
LOC103026411 LOC107680412,LOC107751023,LOC107555990,LOC107714481,LOC107699319 coding upstream 168766 28217461 ~ 28224664 (-)
LOC103044024 LOC108436218 coding upstream 205089 28253784 ~ 28267940 (-)
LOC103025279 tmcc1b,LOC108436190,LOC107746889,LOC107755185,LOC107696833,LOC107656050 coding upstream 221262 28269957 ~ 28294968 (-)
G193370 NA non-coding downstream 294575 27735902 ~ 27736111 (-)
G193369 NA non-coding downstream 299024 27731003 ~ 27731662 (-)
G193367 NA non-coding downstream 306581 27723860 ~ 27724105 (-)
G193223 NA non-coding downstream 524157 27488865 ~ 27506529 (-)
G193386 NA non-coding upstream 18779 28067474 ~ 28067681 (-)
G193411 NA non-coding upstream 117146 28165841 ~ 28166081 (-)
G193424 NA non-coding upstream 186470 28235165 ~ 28236469 (-)
G193426 NA non-coding upstream 195113 28243808 ~ 28244702 (-)
G193435 qrich1,LOC107729405,LOC107558890 non-coding upstream 268649 28317344 ~ 28318704 (-)
tmem167b tmem167b other downstream 15074 28010991 ~ 28015612 (-)
LOC103046149 LOC102777140,LOC108436414,LOC102208887,LOC105027122,LOC108280970,LOC103144351,LOC107751002 other downstream 329355 27425042 ~ 27701331 (-)
LOC111195340 NA other downstream 639115 27390794 ~ 27391571 (-)
G193097 NA other downstream 997597 27031663 ~ 27033089 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other downstream 1306580 26711253 ~ 26724106 (-)
LOC111195422 si:dkey-33m11.6,LOC108411515,LOC108255079,LOC107572850,LOC107714486,LOC107680422 other upstream 145684 28194379 ~ 28213070 (-)
LOC111195343 LOC108434908 other upstream 527412 28576107 ~ 28586222 (-)
G193541 NA other upstream 548860 28597555 ~ 28598638 (-)
G193737 NA other upstream 2117066 30165761 ~ 30180126 (-)
spcs1 spcs1,LOC107680421,LOC107744856 other upstream 2761099 30809794 ~ 30830957 (-)

Expression


Co-expression Network