LOC103047370


Basic Information

Item Value
gene id LOC103047370
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 27147714 ~ 27153326 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007247790.3
CTTCCACTTGGTCTCTTTTTATTCAGAAATGTAAGATGTTGTTAAGGTTCTCTTGTGGGGGTGTTCTAGTTACAATTTACTTGACAATTTCAACATCTGAGGTCAAACACAAGGTAGCAATATCACTCCAGATTTATGGGGAAGAAAAATGGTTGGTGTGGTCAGTCTGGCGTAGTCTACCTGATAGTGAGCTACCAAACCTCGTGAGTAAATGGGGTTCAATCCCTGGTCTGTGTTAATatactgtgctacaccaataggAGTCTTGGGTATGACTCCAAACACCAAATCAGCTCAAATTGGTCACTATGGGTAAGAACGTGAAATGCTAATGTTATCCATTATGTTAACCAGTGCAGTTGTCTGTTAGAGCTTGAGATGTGATGTGTgagccatcagcagccggagtcagagaggtGGAAAGATCTGACTCATGTCTGTTAGCACTGAATGATGTTGGAGGTCTAGCTAGTAGGTAGTAATGGATACCAATTAgggccaatcccatttcacttaTTGCCCCTACCACTTAGCCTTGCGTCCTGATTTCTGCTTGGCATAGAGGGGTAGGGTACGGAGATTTTTAAGAAGGACACTTCAAACGGGTTGTGACAAAGTAGCCCCATGCAACTAAGTTCCAAGAGAGGGAATGACACTTAAAACAAAGATATAGAGGTACAATTGAGCAATAAAATTGGGTCTTAATTGTGGGTTATTTTCAAAATCGTCAAGTAACATACATCATCTCATCCTTCAGGTCATACTATCTGTCCAAACAACAATGAAGATTTCACCCATCCTGCTTGTATCCACACTGCTGGTCAGTCTATGGGGCTCAGTCCTGTGCAGAAAACTCCATCTGGGCACCTGTAGCCTGACCGTCCACACTCATGAGCTCAGGCATCACTTCCAGCAGATCCGCCACAGCATGCTCACAGAAGATAGCCACAAGGGTGTGCGCTTGCTGAAAGTCAACATTATGAAAAATCTGCAGGCCACAGAGAGCTGCTGCTTCCTCAGGCGGGTCCTGAGGTTCTATATCGAGAAGGTCTTCAGCAGCTACACAAGCAGCCAGTCTCTCCACAGGAGAACCACCAGCGTATTGGCCAACTCTTTCCACAGCATCACCAAAGAACTGAAATTATGTCATGCTCAGATGCACTGCCAGTGCAGCCAAGAAACCAACTTGAAATTTGATGCCATCCAGACCAACTATGACAagTTGGAGATGGGAGCAGCTTCGGTGAAGGCGATTGGAGAGCTGGACTCTGTGCTGGAGTGGCTCGAGAGCTTCCACAGCAACTGAGACCATCACCAAAACTAAGCAAAGCTGGACATTGTGTGGATGTGGAGACTTTTGGATTATTTGTGGACATTCACTCGATCACAGGATGTTGAATCACTGAAGGAGCTACATGTAGACCTCCTACAATTACCAGAGAAAACATTTTGACCTTAAAATCATAACTACTGATTATTTATTGAATATCTATTGGCGCtgttttgattttaatttattatgtgA

Function

GO:

id name namespace
GO:0048522 positive regulation of cellular process biological_process

KEGG:

id description
K22667 IL20; interleukin 20

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007247790.3 True 1525 mRNA 0.44 5 27147714 27153326

Neighbor

gene id symbol gene type direction distance location
il10 NA coding downstream 13858 27129152 ~ 27133856 (-)
LOC103035733 foxp4,LOC107739274,LOC107728618 coding downstream 798009 26114437 ~ 26349705 (-)
LOC103036054 mdfi,LOC103036054,LOC107548515,LOC107675846,LOC107728619 coding downstream 1062236 26008796 ~ 26085478 (-)
ppfia4 ppfia4 coding downstream 1376995 25587726 ~ 25770719 (-)
LOC103039085 NA coding downstream 1593027 25508488 ~ 25554687 (-)
prelp prelp coding upstream 9421 27162747 ~ 27170995 (-)
LOC103032351 LOC108435192 coding upstream 43725 27197051 ~ 27210316 (-)
LOC103031188 chia,LOC108435172,LOC108255197,LOC108255198 coding upstream 121331 27274657 ~ 27290319 (-)
LOC107197599 NA coding upstream 133894 27287220 ~ 27292809 (-)
LOC103046766 LOC108436454 coding upstream 143340 27296666 ~ 27299571 (-)
G193110 NA non-coding downstream 8478 27138083 ~ 27139236 (-)
G193085 NA non-coding downstream 148641 26927108 ~ 26999073 (-)
G193056 NA non-coding downstream 247900 26885836 ~ 26899814 (-)
G193062 NA non-coding downstream 248310 26898271 ~ 26899404 (-)
G193049 NA non-coding downstream 271094 26876370 ~ 26876620 (-)
G193156 NA non-coding upstream 76773 27230099 ~ 27230302 (-)
G193160 NA non-coding upstream 86100 27239426 ~ 27239902 (-)
G193165 NA non-coding upstream 111141 27264467 ~ 27299949 (-)
G193154 NA non-coding upstream 142402 27295728 ~ 27305659 (-)
G193178 NA non-coding upstream 171080 27324406 ~ 27324839 (-)
G193097 NA other downstream 114625 27031663 ~ 27033089 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other downstream 423608 26711253 ~ 26724106 (-)
LOC111195415 tfeb other downstream 1269061 25874910 ~ 25878653 (-)
G192815 mdm4 other downstream 1930164 25211675 ~ 25217550 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other downstream 3041816 24039246 ~ 24105898 (-)
LOC111195340 NA other upstream 237468 27390794 ~ 27391571 (-)
LOC103046149 LOC102777140,LOC108436414,LOC102208887,LOC105027122,LOC108280970,LOC103144351,LOC107751002 other upstream 271716 27425042 ~ 27701331 (-)
tmem167b tmem167b other upstream 857665 28010991 ~ 28015612 (-)
LOC111195422 si:dkey-33m11.6,LOC108411515,LOC108255079,LOC107572850,LOC107714486,LOC107680422 other upstream 1041053 28194379 ~ 28213070 (-)
LOC111195343 LOC108434908 other upstream 1422781 28576107 ~ 28586222 (-)

Expression


Co-expression Network