G72499


Basic Information

Item Value
gene id G72499
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 6057224 ~ 6057425 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU82697
CTTCATCTTTGTCAGCATGGGCCCTGGCAAACTCTAGGCGGGCTTTTTTGTGCCTGGGCTTTAGGAGAGGCTTCTTTCGTGGACGGCACCCATGCATGCCATTCCTCTGCAGTGTACGCCGTATTGTGTCACGGGAAATAGTCACCCCAGTTTGGCTTTCTACTTCTTTAGATAACTGCAGTGAACTTGTATGCCGATTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82697 True 202 lncRNA 0.50 1 6057224 6057425

Neighbor

gene id symbol gene type direction distance location
CI01000012_05946986_05984551 SLX4IP coding upstream 71265 5946986 ~ 5985959 (+)
CI01000012_05923216_05928055 SRD5A2B coding upstream 128038 5922385 ~ 5929186 (+)
CI01000012_05909453_05916000 MEMO1 coding upstream 141050 5909453 ~ 5916174 (+)
CI01000012_05856793_05862577 NA coding upstream 194582 5856316 ~ 5862642 (+)
CI01000012_05748899_05754466 ERLEC1 coding upstream 301970 5748899 ~ 5755254 (+)
CI01000012_06156417_06175135 NA coding downstream 97422 6154847 ~ 6175521 (+)
CI01000012_06182472_06192196 NA coding downstream 123582 6181007 ~ 6192613 (+)
CI01000012_06208439_06217101 BTBD3B, BTBD3 coding downstream 151014 6208439 ~ 6217914 (+)
CI01000012_06334114_06368535 SPTLC3 coding downstream 275924 6333349 ~ 6369091 (+)
CI01000012_06380300_06388370 ISM1 coding downstream 322875 6380300 ~ 6388991 (+)
G72484 NA non-coding upstream 29313 6027694 ~ 6027911 (+)
G71668 NA non-coding upstream 135825 5921193 ~ 5921399 (+)
G71637 NA non-coding upstream 213670 5843064 ~ 5843554 (+)
G71623 NA non-coding upstream 242275 5813517 ~ 5816605 (+)
G71622 NA non-coding upstream 245997 5810037 ~ 5811227 (+)
G72516 NA non-coding downstream 88772 6146197 ~ 6146540 (+)
G72548 NA non-coding downstream 128122 6185547 ~ 6185835 (+)
G72551 NA non-coding downstream 138205 6195630 ~ 6195856 (+)
G72552 NA non-coding downstream 139596 6197021 ~ 6205504 (+)
G72568 NA non-coding downstream 193568 6250993 ~ 6251313 (+)
G71548 NA other upstream 495791 5550493 ~ 5561433 (+)
G71221 NA other upstream 516768 5538525 ~ 5540456 (+)
G71218 NA other upstream 518840 5535852 ~ 5538384 (+)
CI01000012_07806089_07811902 BEND3 other downstream 1748678 7805248 ~ 7811902 (+)
G73578 NA other downstream 2309381 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 4164530 10223697 ~ 10236276 (+)
G75533 NA other downstream 5087392 11144817 ~ 11145739 (+)
G76385 NA other downstream 6573330 12630755 ~ 12675666 (+)

Expression


Co-expression Network