LOC103026802


Basic Information

Item Value
gene id LOC103026802
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 21342702 ~ 21348384 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007248356.3
atataaaagcaaCTTGAAGAATATGCACAAATGCATTGTTGAAGGGATGGAACAAGCGAGAACTCCTCTCGAACACGTTTACACTGAGCTCTGCATTGTAGAAGGAGAAAGGAAATTGAAAGGACATGAAATGTGgcaaacagaacagaaatacAATCCACTGTTCTCATACGGCAGAGCTATTACCTACGACAATATCTTTACACCCACGTCAATTTGTGAATCTAACGaagaacaaaaagagaaaacaatcaGAACTGTACTCACGAAAGGTGTCGCTGGGATTGGAAAAACTGTGTCTGTGCAAAAGTTCATCCTCAACTGGGTCAAAGGGATTGCAAATCAAGACATAGACTTGATCATTTTGCTTCCATTCCGGGAGCTAAACTTGGTCAAAGAAAACCAGTACAGTTTACAAAAGCTTCTGATTTATTGTTATCCTGCACTTGAGACCATTATGGAATACATCACCACACTCAAACTCATACTTATCcttgatggtctggatgaaaGCAAGCTTGAACTGAATTTTGACTGCGAGAACCTGTCTGATACAGCAAAAGCATCAAGAGTGGATGAGTTGTTGGTGAATCTGATCAAAGGAAAGCTGCTTCCCAATGCTCATGTCTGGATAACTTCACGACCTGCTGCATCTGATCAGATTCCCCCAGAATATACACAGCGTGTAACAGAAATTCTGGGATTTTCTAACAGTCAGATAGAAGAGTACCTGAAGAAGAGGATCAGTGACCAGGAACAAGCGAATAAAATCATTGCCCATATCAAACAGTCAAGGACTCTGTATGACATGTGCAGAATACCACTATTCTGTCAGATTGGTGCTGCTCTGCTTCAGCAAAACGCAGATACCATCCCAAAATCTCTGACCGAAATGTACACAAACTTATTGCTAATTCAGACAGGCATAACACAGCAGAAATATGAgaccagcagagagagagattcaaaAAAGCTTCTTGAATCCAACAGAGCTAAAATTCTCAAACTGGCAAAACTGGCTTTCCAACAAATGACAAAAGGCAATACAAAGTTCTATGAAGAGGATCTAAAAGCGTGCAACATTGATGTCACCGAGCCTTCGCTGTACTCTGGCATTTTCAACGAGATGTTTATGGTTGAATATGGGTTTTACCAGAGGAGGGTCTACTCATTTGTGCCTTTGAGTTTTCAGGAGTTCTTGGCAGCTTTTTATGTGTTTCACTGCTTTGTAACCAAAGACATACAGGATCTTCAGTTTTTCAATCCACTATATAAAGAGCCTTCTGGGGATGTGAGACTGGAGACTATCCTGAAAGAAGCAGTCAATAAAGCGTTACAAAGTCAGACTGGACACCTGGATCTTTTCCTCCGTTTCCTGCTGGGCATCTCACTGGAGTCCAATCAAAGACTACTACAGGGCCTATTGACTCAGAAACATACCAGCTCAGAAAGCATCGACAAAACAATCAACCACATCAAACAGGAAATACAATCAAGAAGCCTTCCTCTTGAGAGATCCATTAGTCTGTTCCTTTGTCTAACTGAAATGAATGACCAGTCTTTCTCAAGTGACATTCAGAAGTACCTAAAGtcaaaaaagtactcaaaagATGGGATCTCCCCTGGACAATGCTCAGCACTTGCTTGCATCCTGCTGGTGTCAGAGAAGGAGTTTGATGAGCTGAACCTGAATGAGTACTGCACATCAGAAGAGGGTTATAGGAGATTAATTCCAGCTGTCAGCAACCACAGAAAAGCTTTACTAGTTGGCTGTAATCTCACCATGGTGTCCTGGGGCACACTCTCTTCAGCTCTGAATTCAACAAACTGCCACCTAAAGGAACTAGACCTCAGTTACAATGACCTGTATGATTCAGGACTGGAGCTGCTCTCTgttggactgaagagttcacactgtaaactacagacactcAGActtatttgctgtaatctcaccaCATTGTCTTGTGAAACTTTCTGCCCCATTCTGAAATCACCAAACTCCTCCCTAAaggagctggacctcagtaacaatgacctgcaaGATTTAGGGGTGGAGCAGCTTTCTGCTGGAttaaagagttcacactgtataCTGGAGATACTCAGGTTGTCTGGATGTATGGTCTCATCGAAAGGCATCTCatttttagctttaactctGAGTTCAAATCTGAAATGCCTAAAAGAACTGGATCTGACCTACAATCACCCAGAGGACTTAGGGGTCAGGCAGCTCTTTGAAAGACTAGAAGATCCACAGTGCAGTTTGGAGACTCTCAGGATGAAACATGGTGGGGAGATCAGAATGAAACCTGGACTAAGAAAATATACTTGTGACCTGACCTTGGACCCTAACACAGCACACACCCGTCTTATTCTGTCTGAGGGAAACAGCAAAGTAAACTGCGTGAAATCACTACAGTCAtatcctgatcatccagagagatttTCTTTCTTAAAGCAAGTGCTATGCAAAGAAAGTCTTACTGGACGCTGCTACTGGGAAGCTGAATGTAGTCAGTGGGTTAATGTAGTGGTCACCTATAAAGGAATTGGCAGGAAGGGAAATGGTGCTAATTGTGAGTTTGGTCGTAATAAAAAATCCTGGATTTTGTTTTGCTCGTCCAATGGTTACACTGCTTGTCACGATGACAAGGAAACTAACATAGCTACCAAAACTTCTTCCAGCTTCAACAGAGTTGGGGTTTATCTGGACTTTATGGCTGgaactctgtccttctacagcaTCGCCTCTGATACACACACTTTCACCCACTTACACACATTCATCTCCACGTTTACTGAGCCCCTCTATACTGGGTTTATGTTGTATACTGATGCTTGTGTGCATATCATATCCTCCCATAGGTCCTAGTGAGGTCGCTCCTATTGAATCTTTGCAACTATAAAGCCCCAGCATAATTCACTTTTTTCTAATGCCATTTTTCCCTTTCACAATTTTTCTCACCATCTTGATCCAAACTTAAGCTAAACTGGTCCTGCTTATCATATTTGTATTGATATTGAACTGTACCTGTATAAAAATGAGCTATTTTGGCGATCTAAAGACAGCTTGATGTTGGGGTGTCAGTAGGGTTGCCAACTTTTCATAAATGAAATaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007248356.3 True 3125 mRNA 0.42 6 21342702 21348384

Neighbor

gene id symbol gene type direction distance location
gpx1 gpx1a,LOC103031640,LOC108435306,LOC108255192,LOC107577558,LOC107718196,LOC103360354 coding downstream 227779 21112480 ~ 21114923 (-)
LOC103031955 NA coding downstream 245462 21093650 ~ 21097240 (-)
itpr1 itpr1 coding downstream 270284 20837118 ~ 21072418 (-)
bhlhe40 bhlhe40 coding downstream 521178 20816597 ~ 20821524 (-)
LOC103032600 arl8b,LOC103032600,LOC107095653,LOC108435203,LOC105934196,LOC108255114,LOC107385792,LOC103386496 coding downstream 535251 20795413 ~ 20807451 (-)
LOC103027815 LOC108424594,LOC106566152 coding upstream 64305 21412689 ~ 21428618 (-)
itga7 itga7 coding upstream 93904 21442288 ~ 21498063 (-)
LOC111195406 NA coding upstream 159668 21508052 ~ 21508261 (-)
arfgap1 arfgap1 coding upstream 202371 21550755 ~ 21570651 (-)
LOC111195407 NA coding upstream 223983 21572367 ~ 21583063 (-)
G191787 NA non-coding downstream 62950 21279003 ~ 21279752 (-)
G191691 NA non-coding downstream 103180 21173472 ~ 21239522 (-)
G191664 NA non-coding downstream 235880 21105440 ~ 21106822 (-)
G191653 NA non-coding downstream 250467 21091820 ~ 21092235 (-)
G191647 NA non-coding downstream 385146 20956989 ~ 20957556 (-)
G191812 NA non-coding upstream 177775 21526159 ~ 21528036 (-)
G191827 NA non-coding upstream 361532 21709916 ~ 21711285 (-)
G191858 NA non-coding upstream 484758 21833142 ~ 21833495 (-)
G191870 NA non-coding upstream 511742 21860126 ~ 21924848 (-)
G191880 NA non-coding upstream 609457 21957841 ~ 21958432 (-)
brk1 brk1,BRK1,LOC106565571 other downstream 239484 21099347 ~ 21103218 (-)
LOC103036492 card19,LOC108443695 other downstream 1814122 19511321 ~ 19528580 (-)
LOC103032794 tusc2,tusc2b,LOC107593101,LOC107587002,LOC107695626 other downstream 2440417 18897509 ~ 18902285 (-)
LOC111195399 wu:fd14a01,myhz1.2,LOC108444093,LOC108443910,LOC108444092,LOC108416711,LOC108416675,LOC108416954,LOC108443907,LOC108254798,LOC108261508,LOC107737926,LOC107575389,LOC108416101,LOC107681327,LOC108261437,LOC108254800,LOC106570860,LOC102780693,LOC101068441,LOC108417180,LOC101164155,LOC105899468,LOC107378336,LOC107378334,LOC101071797,LOC105890352,LOC107372732,LOC107093413,LOC108254796 other downstream 2543787 18708319 ~ 18798915 (-)
LOC103041510 LOC108414096 other downstream 3027365 18311452 ~ 18315337 (-)
npff npffl,npff,LOC107738884,LOC107677943,LOC107669931 other upstream 81632 21430016 ~ 21436453 (-)
elmo2 elmo2,LOC106583331 other upstream 162540 21510924 ~ 21544831 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other upstream 498585 21846969 ~ 21851642 (-)
alas1 alas1,LOC106583798 other upstream 1000963 22349347 ~ 22362458 (-)
amhr2 NA other upstream 1361165 22709549 ~ 22722905 (-)

Expression


Co-expression Network