G72548


Basic Information

Item Value
gene id G72548
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 6185547 ~ 6185835 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU82748
GGGCACTTGATGGACTGCAACATCCTGGACAAGATCATCTTCCTCTGTGAACCAGACAGCAATAGAAAGACAGACTGTGACTGTTCATGGCAGTCAAACTCTCAATGCCTGATGCAGTGAGACAAGCTAGTAAATAGAAGTTAATCGGTCAGGGAGCGTGAAAACGTCTGCAGCTCCATTGAGGCCTGCGCATCCGAGGGCCCTGGAGACCACCCCTGGACCTGATGTTGTCTGACACAACACCAACTTTTCTGAGGAAACCAACTCAGCCACCAGCAAGGGTTCTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82748 True 289 lncRNA 0.51 1 6185547 6185835

Neighbor

gene id symbol gene type direction distance location
CI01000012_06156417_06175135 NA coding upstream 10026 6154847 ~ 6175521 (+)
CI01000012_05946986_05984551 SLX4IP coding upstream 199588 5946986 ~ 5985959 (+)
CI01000012_05923216_05928055 SRD5A2B coding upstream 256361 5922385 ~ 5929186 (+)
CI01000012_05909453_05916000 MEMO1 coding upstream 269373 5909453 ~ 5916174 (+)
CI01000012_05856793_05862577 NA coding upstream 322905 5856316 ~ 5862642 (+)
CI01000012_06208439_06217101 BTBD3B, BTBD3 coding downstream 22604 6208439 ~ 6217914 (+)
CI01000012_06334114_06368535 SPTLC3 coding downstream 147514 6333349 ~ 6369091 (+)
CI01000012_06380300_06388370 ISM1 coding downstream 194465 6380300 ~ 6388991 (+)
CI01000012_06441231_06476986 KIF16BB coding downstream 255357 6441192 ~ 6477104 (+)
CI01000012_06620470_06637571 NA coding downstream 434225 6620060 ~ 6637689 (+)
G72516 NA non-coding upstream 39007 6146197 ~ 6146540 (+)
G72499 NA non-coding upstream 128122 6057224 ~ 6057425 (+)
G72484 NA non-coding upstream 157636 6027694 ~ 6027911 (+)
G71668 NA non-coding upstream 264148 5921193 ~ 5921399 (+)
G71637 NA non-coding upstream 341993 5843064 ~ 5843554 (+)
G72551 NA non-coding downstream 9795 6195630 ~ 6195856 (+)
G72552 NA non-coding downstream 11186 6197021 ~ 6205504 (+)
G72568 NA non-coding downstream 65158 6250993 ~ 6251313 (+)
G72572 NA non-coding downstream 68108 6253943 ~ 6254154 (+)
G72730 NA non-coding downstream 210562 6396397 ~ 6396703 (+)
G71623 NA other upstream 368942 5813517 ~ 5816605 (+)
G71548 NA other upstream 624114 5550493 ~ 5561433 (+)
G71221 NA other upstream 645091 5538525 ~ 5540456 (+)
G71218 NA other upstream 647163 5535852 ~ 5538384 (+)
CI01000012_07806089_07811902 BEND3 other downstream 1620268 7805248 ~ 7811902 (+)
G73578 NA other downstream 2180971 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 4036120 10223697 ~ 10236276 (+)
G75533 NA other downstream 4958982 11144817 ~ 11145739 (+)
G76385 NA other downstream 6444920 12630755 ~ 12675666 (+)

Expression


Co-expression Network