G72551


Basic Information

Item Value
gene id G72551
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 6195630 ~ 6195856 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU82751
CCTTAAAGGAAGTGGCTTAACGTGAAGAAACTGACGTGTTGTTGTGAGTCATATGCTGAGCTTTTTCCGGAAACTTTTATGAACGGCTTGATTCTCCCCATGTATCTGCTGCATGAGTCTATATTTTTTTGCTTGTGTACGCGGTAGAAAAGGGCAGCGTGCGTGTTGCCTTTAATGTTAACACCTCATTATCCTGATTAGCATCACTGTGATTATGTTAGTGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82751 True 227 lncRNA 0.42 1 6195630 6195856

Neighbor

gene id symbol gene type direction distance location
CI01000012_06182472_06192196 NA coding upstream 3017 6181007 ~ 6192613 (+)
CI01000012_06156417_06175135 NA coding upstream 20109 6154847 ~ 6175521 (+)
CI01000012_05946986_05984551 SLX4IP coding upstream 209671 5946986 ~ 5985959 (+)
CI01000012_05923216_05928055 SRD5A2B coding upstream 266444 5922385 ~ 5929186 (+)
CI01000012_05909453_05916000 MEMO1 coding upstream 279456 5909453 ~ 5916174 (+)
CI01000012_06208439_06217101 BTBD3B, BTBD3 coding downstream 12583 6208439 ~ 6217914 (+)
CI01000012_06334114_06368535 SPTLC3 coding downstream 137493 6333349 ~ 6369091 (+)
CI01000012_06380300_06388370 ISM1 coding downstream 184444 6380300 ~ 6388991 (+)
CI01000012_06441231_06476986 KIF16BB coding downstream 245336 6441192 ~ 6477104 (+)
CI01000012_06620470_06637571 NA coding downstream 424204 6620060 ~ 6637689 (+)
G72548 NA non-coding upstream 9795 6185547 ~ 6185835 (+)
G72516 NA non-coding upstream 49090 6146197 ~ 6146540 (+)
G72499 NA non-coding upstream 138205 6057224 ~ 6057425 (+)
G72484 NA non-coding upstream 167719 6027694 ~ 6027911 (+)
G71668 NA non-coding upstream 274231 5921193 ~ 5921399 (+)
G72552 NA non-coding downstream 1165 6197021 ~ 6205504 (+)
G72568 NA non-coding downstream 55137 6250993 ~ 6251313 (+)
G72572 NA non-coding downstream 58087 6253943 ~ 6254154 (+)
G72730 NA non-coding downstream 200541 6396397 ~ 6396703 (+)
G72731 NA non-coding downstream 200888 6396744 ~ 6397010 (+)
G71623 NA other upstream 379025 5813517 ~ 5816605 (+)
G71548 NA other upstream 634197 5550493 ~ 5561433 (+)
G71221 NA other upstream 655174 5538525 ~ 5540456 (+)
G71218 NA other upstream 657246 5535852 ~ 5538384 (+)
CI01000012_07806089_07811902 BEND3 other downstream 1610247 7805248 ~ 7811902 (+)
G73578 NA other downstream 2170950 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 4026099 10223697 ~ 10236276 (+)
G75533 NA other downstream 4948961 11144817 ~ 11145739 (+)
G76385 NA other downstream 6434899 12630755 ~ 12675666 (+)

Expression


Co-expression Network