LOC103043315


Basic Information

Item Value
gene id LOC103043315
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 30718976 ~ 30720245 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682154.1
atgcaGCAGAAAATGGAGCTGCagctgaaaaagaaagaaatgcagctgaaaaagaaggagaggctgcttaaagagaaagagatgcaGCTGAAAGAGACGGAGGAGgacctgaaaaagaaaaagatgcagcTGAAAGATGAAAAGGCGGGGCTGAAAGAGACAGAATTGCAACTGAGTAAGAAGGAGATGAGTCTGAAAAGAAAGACGGCTAGGCTGAAAGGGAAGGAGGAACAGCTGCAAGAGAAGGAGGGGCAGCTGCAAGAGAAGGAGGGGCAGTTGCAAGAGAAGGAGGAGCAGCTGCAAGAGTATgagaaacagcagcaagagATAGATGAACAGCTGAAAGAGGAGGTGGAGCAGCTGGAAGAGAAGGAGGGGCAGCTGCAAGAGTATGGGAAACAGCTGCAAGAGAGGAGGAGCAGCTGCAAGAGAAGGAGGAACAGCTGCAAGAGAAGGAGAAACAGCTTGCAAGAGGTAGAGGATCAGCTACAAGAGAAGGTGGAGCAGCTGCAAGAAAAGGAGGAGCAGCTGCGAGAGAAGGAGGAACAGCTGCAAGAGAAGGAGGAGCAGCTGCAAGAGCAGGATAAACAGCTGCAAGAGAAGGAGGGGCAGCTGCAGGAGCAGGATAAACAGCTGCAAGATAAGGAGAGGCAGCTGCAAAAGAAGGAGAAACAGGTGCAAGAGAAGGAGGAACAGCTGCAAGAGAAGGAGAAACAGCTGCAAGAGAAGGAAGAGCAGCTGCAAGAGAAGGAGGAGCAGCTGCAAGAGCAGGATAAACAGCTGCAAGAGAAGGAGGAGCAGCTGGAAGAGAAGGAGGAAAAACTGGAAGAGAAGGAGGAACAGCTGCAAGAGAAGGAGGAGCAGCTGCAAGAGCAGGATAAACAGCTGCAAGAGAAGGAGAAACAGCTGCAAGAGAAGGAAGAGCAGCTGCAAGAGAAGGAGGAACAGCTGCAAGAGAAGGAGGAGCAGCTGCAGGAGCAGGAGAAACAGCTGCAAGAGAAGGAAGAGCAGCTGCAAGAGAAGGAGGAGCAGCTGCAGGAGCAGGATAAACAGCTGCAAGAGAAGGAAGAGCAGCTGCAAGAGAAGGAAGAACAGCTGTATAAAGTAGATGCAACAGAAGAAGATGCAGCTGAAAGAGAAGGACTTGCAGAAATAGATCCTGCTGAAAGAGAAGAAGATGCATTAGAAAGGGGGGAGGTGGATTATCAAGAGGGGGGTGAATTATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682154.1 True 1227 mRNA 0.50 2 30718976 30720245

Neighbor

gene id symbol gene type direction distance location
ptprg ptprg,ptprga,LOC107752167,LOC106583020 coding downstream 959351 29302534 ~ 29759625 (-)
cse1l cse1l,LOC107750990,LOC107699361 coding downstream 1427373 29280150 ~ 29291603 (-)
LOC103040276 NA coding downstream 1440412 29269921 ~ 29278564 (-)
LOC103042113 LOC103042113,LOC108435091 coding downstream 1464147 29233512 ~ 29254829 (-)
LOC103040895 LOC108436021 coding downstream 1499968 29177346 ~ 29219008 (-)
LOC103040946 LOC108435972,LOC107714490,LOC107566450,LOC108254900 coding upstream 8990 30729235 ~ 30802508 (-)
gnl3 NA coding upstream 127052 30847297 ~ 30856549 (-)
sfmbt1 sfmbt1 coding upstream 475577 31195822 ~ 31230829 (-)
LOC103036366 prkcd,prkcdb,LOC108435819,LOC107696837,LOC107728641,LOC107656045,LOC107600299 coding upstream 518226 31238471 ~ 31287104 (-)
LOC103035852 LOC108435806 coding upstream 585322 31305567 ~ 31370546 (-)
G193770 NA non-coding downstream 118078 30537778 ~ 30600898 (-)
G193764 NA non-coding downstream 213939 30436885 ~ 30505037 (-)
G193736 NA non-coding downstream 509998 30156138 ~ 30208978 (-)
G193723 NA non-coding downstream 913061 29804482 ~ 29805915 (-)
G193678 NA non-coding downstream 985704 29732572 ~ 29733272 (-)
G193818 NA non-coding upstream 4187 30724432 ~ 30728862 (-)
G193846 NA non-coding upstream 123810 30844055 ~ 30845956 (-)
G193866 NA non-coding upstream 173382 30893627 ~ 30911740 (-)
G193886 NA non-coding upstream 248074 30968319 ~ 30983362 (-)
G193889 NA non-coding upstream 291042 31011287 ~ 31011543 (-)
G193737 NA other downstream 538850 30165761 ~ 30180126 (-)
G193541 NA other downstream 2120338 28597555 ~ 28598638 (-)
LOC111195343 LOC108434908 other downstream 2132754 28576107 ~ 28586222 (-)
LOC111195422 si:dkey-33m11.6,LOC108411515,LOC108255079,LOC107572850,LOC107714486,LOC107680422 other downstream 2505906 28194379 ~ 28213070 (-)
tmem167b tmem167b other downstream 2703364 28010991 ~ 28015612 (-)
spcs1 spcs1,LOC107680421,LOC107744856 other upstream 89549 30809794 ~ 30830957 (-)
LOC103037496 mustn1,LOC103037496,LOC103359875,LOC107091502 other upstream 450053 31170298 ~ 31194049 (-)
trnae-cuc_20 NA other upstream 454562 31174807 ~ 31174878 (-)
cadps cadps,LOC107549847 other upstream 730558 31450803 ~ 31654210 (-)

Expression


Co-expression Network