mmel1 (mmel1,LOC107756657,LOC107654428,LOC107702001,LOC107712974,LOC107592889)


Basic Information

Item Value
gene id mmel1
gene name mmel1,LOC107756657,LOC107654428,LOC107702001,LOC107712974,LOC107592889
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 4584260 ~ 4611730 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682273.1
CCCTCAGAGGCATAACGGAACAGACAGTCCCTCTGGCATCCAGCCGTCTGCACGCTGCTTCATTTCTGCACACACCAGCTCCGGGCGAGAGCCTAGAAGGGGTGTTGGAGAAATTGAAAGGCGTCCAGAGAGGGCCTCCAGGGAACGGCTCCATCACAGAAGAGAGATCACCACAGAATGGGAAAATCTGAGAGCCAAATGGATATCATGGAGAAGACAACTAAACCCAGGAAGCACCGCTGGACCGTAGTGGAGATCGGCTTGTCCATTATCTTGCTGCTGATGAGCTGTGCTCTGGCTGGACTGGTCGTGCTCTATGCTTCTTCACTGAAGGaATACTCCTTTAGAAATGGACATTCAAAAGGGCTACAGTATCACGTTGCCCCTGACAGCAGTGTGTGCACGACCCCTGACTGCGTTACTGCAGCTGCAAGGCTGCTGCAGAACATGGACCCCAGCGTTGACCCATGCCAGAACTTTTACCAGTACGCCTGTGGAGGATGGCTGGAGCGGCATGTCATCCCCGAGACCAGCTCGCTTCACAGCGTCTTCAACATCCTGAGGGACGAGCTGGAAATTGTGTTAAAGGGGATTCTGGAAACGGAGAGTGAGCGTGACCGTCAGGCTTTTAAGAAGGCTAAAATGCTCTACAGATCCTGTATGAATGAGAGTGTAATCGAGCAGCGCGACTCTCAGCCCCTCCTGAAGCTCATTGACAGTATTGGCGACTGGCCCGTAGCCTCGGAGGATTGGAACAGCACAGCAGAGGAAACCTGGAGGCTGGATGAAACCCTGGCGACCTTAAATGCTCACTACAACAAGAAGGTTTTGCTGGAAATGTTTGTGTGGCCTGACGATCGAGACTCTAGTCGTCACATCATTCAcATTGACCAGCCATCACTTGGAATGCCCTCAAGAGATTATTACCTCAATGATGGAAACTACAAAAAGGTGCGTGAGGCCTACCTGCAGTTCATGGTTTCCATGGCGAAAATAGCGCGGGAGGACAGGAACCTGACCCAAGACGATGAGCATGTGTGGGATGAAGTGAAGCAAGTGatggagctggagagagagatagctaaTGCCACATCTCCAGCTGAGGAGCGCAACGACATCACTGTCCTGTACAACAAGATGACCCTGCGAGAACTGCAGGACACCTTTGGTCTTGATGGTTTTAACTGGACCCGCTACATTCAGGGCATCATGGAAAGCGTTTCCATCGTAGTGAACCCAGAGGAACCCATCGTGGTGTACTGTTCACCATACCTGGACAAGCTCAACAATATACTGCCTCGATATGACCGCAGGACTGTGCAGAACTACTTGGTGTGGATGCTCCTGATGGAAAGGGTCAGCAGCCTGAGCCGGCGCTTTAAAGATGTGCGAGCTCACTACAGAAAGGCTTTACACGGCACCACCGTAGAGGAAGCTCGCTGGCGGGACTGCGTTCGTTACGTCCAGAGCAATATGGAGAATGCAGTGGGGGCTTTGTATGTGCGGGAGACCTTCGCTGGAGAGAGCAAGCGCATgGTTGGTGAGCTGATCCGAAAGATTCAGGAGGCTTTTGTGGAAACAGTGGAAGAGCTGAACTGGATGGATGATCAGTCCAAGGAGAAAGCCAGAGAGAAGGCTATGGCTATTTCAGAGCAGATCGGCTACCCAGACTATATCCTGCAAGAGGAAACTCAGAAGCTGGATCAGGAGTACACCCATTTAAATTTCAGTGAGGAGAGCTACTTCGAGAATATTCTGCAGAACCTTCAAGCTACTGCTCAGAAAGGTCACAAGAAGCTGCGGGAACCTGTGGACCCGGACTTGTGGATCATCGGTGCAGCTGTGGTCAATGCGTTCTACTCTCACAACAGAAACCAGATAGTGTTTCCTGCTGGAATTCTGCAGCCTCCTTTCTTCAGCGAAAAGCAGCTCCAGGCACTAAACTTCGGAGGCATCGGGATGGTGATAGGACACGAAATCACTCACGGCTTTGATGACCACGGACGGAATTTTGACAAAGACGGGAACATGTACAACTGGTGGAGCAACTATTCTACTGAACACTTCGAGGAGCAGTCGAAATGCATGGTGCAACAGTATGGCAAATTCACCTGGAAGCTTGCAGGAGGTCAAAATGTTAGTGGCATTACCACTTTGGGGGAGAACATTGCTGATAATGGAGGAGTTCGGCAAGCGTATAAGGCATACATGAAGTGGATAGAAAGGGAAGGCGAGGAGTCTTATCTTCCAGGTTTGGACCTGGACCATAAGCAGCTCTTCTTCCTCAACTTTGCCCAGgTATGGTGCGGAGCCTGTCGCCCTGAATACGCCATCCAGTCCATTAAAACAGACCCTCACAGCCCTCTGGAGTACAGGGTGCTGGGGTCTCTGCAGAACTTTGAAGCGTTTTCCGAGGCCTTCCACTGCCAGAGAGGAGCTCCCATGAATCCGGAGGAGAAATGCAGAGTGTGGTAGCTTGTGTCGTATTTAGCGAATGGTTTGCTTTCTTCACCAAGGCAGTAGCTGGGAAATTCCTGACCTTTAATGTTGTGTACGACTGGCGATGAGCTGCCTTATTGTTTTGTCtcttgagagagagacagagattatTATGGCTACCTAGTTTTACAGGCAGGTACACACAGacaagagacacacagacacacccccCTTTAGAGGAGTTTAGAGGAGTTTAGCGGAGTTAAGAGGAGATTAGCGGGTGTTTAATTCACACTTTATCACCTACCTAAGTGCAGTGTGCTCACAGTGAAGGTGGCAGTGTGAAAAGTTTGTTGTCACTTACAGTACGAAGTTGGTTTCTGAAGGTCTGAGAAATGTGTTTGGGGAAATTTATCACACTGAATTAATTACAACATCTGAAGCTGTTGATGATATACATAATATTAGTCACGATAAAGatcagacagatttatttttaaagattatgTAAATAGATAAATGCTGAATGCTGGCTTTGACTGTGGACCTTTTGACGAGACCTTCAGAAAACGTTACGCATTTTACGAAATCCTTCTGCCATCCAAAAAACAGGCTTTGAAGCCCACACAGTTTTTAAATCCTAGCGAATGTATTGTGTCTCTTTTGGCATGGAGCAGCTTTTAAAAAGGATGTTGAggtagaataaaatataaaaagaaaaagaaaatatatgtttggTGGCATCTTTTATCATaggaataaaatacattattttaaattgataaataaatgattatatatgaaaaatatatatagatagatacagagatacagattAGATCTatttaatatgaaaaatatgatcTGTAAATGTAAGCTGTGTACCTCCATCAGCAATTGGAGCAATTACCTGAAGACTTTAAGactgttaaaaataatataaaaaaaaatctatatgtttttttttagaagttttgCAGTAGGGATATTGTAATGTGAATAATGTTCCTTCATCTTTGATGTAGTAGACATGATTTTACTGTTGGACATAAGATGCTGATGTTTACGTACATACAAtcaagttttatatatatataaatatatatatagctgagCACCTCAATATAAAGGTTTCTTTCTGTAGCAGTTTAACATGGCATACACTTTAAA

Function

symbol description
mmel1 Predicted to enable metalloendopeptidase activity. Predicted to be involved in protein processing. Predicted to act upstream of or within proteolysis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human MMEL1 (membrane metalloendopeptidase like 1).

NR:

description
PREDICTED: membrane metallo-endopeptidase-like 1

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004222 metalloendopeptidase activity molecular_function

KEGG:

id description
K08635 MMEL1, NEP; neprilysin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682273.1 True 3609 mRNA 0.46 24 4584260 4611730

Neighbor

gene id symbol gene type direction distance location
slc45a1 slc45a1,LOC107654425 coding downstream 24461 4538302 ~ 4559799 (-)
errfi1 LOC108413607 coding downstream 200022 4374402 ~ 4384238 (-)
LOC103030039 pax7,pax7a,LOC108255053,LOC107701983 coding downstream 280805 4228840 ~ 4303455 (-)
park7 park7,LOC107657982,LOC107701995 coding downstream 412433 4162390 ~ 4171827 (-)
LOC107196799 LOC108431625,LOC107706545 coding downstream 667484 3908371 ~ 3916776 (-)
LOC103025299 NA coding upstream 198953 4810683 ~ 4824075 (-)
LOC103024243 NA coding upstream 231502 4843232 ~ 4857309 (-)
LOC103024768 LOC108441423 coding upstream 288285 4900015 ~ 4934604 (-)
per3 per3,LOC108441424,LOC107654358,LOC107592896 coding upstream 334842 4946572 ~ 4972846 (-)
LOC103022065 NA coding upstream 383267 4994997 ~ 5466875 (-)
G187340 NA non-coding downstream 7621 4574032 ~ 4576639 (-)
G187339 fam213b,LOC107702003,LOC107582414,LOC107712975 non-coding downstream 18411 4560308 ~ 4565849 (-)
G187335 LOC103028044 non-coding downstream 46325 4492577 ~ 4537935 (-)
G187344 NA non-coding downstream 68736 4514930 ~ 4515524 (-)
G187331 NA non-coding downstream 97278 4486777 ~ 4486982 (-)
G187353 NA non-coding upstream 16196 4627926 ~ 4632465 (-)
G187365 NA non-coding upstream 103885 4715615 ~ 4718668 (-)
G187375 NA non-coding upstream 189378 4801108 ~ 4801901 (-)
G187431 NA non-coding upstream 257195 4868925 ~ 4869788 (-)
G187432 NA non-coding upstream 258161 4869891 ~ 4870820 (-)
LOC103030666 kcnab2a,LOC108431628,LOC107712982,LOC107657983,LOC107582417,LOC107592856,LOC108255041,LOC103385628,LOC101463812,LOC108231619,LOC107385277,LOC106513833,LOC100709904 other downstream 423306 3970934 ~ 4160954 (-)
LOC107197677 NA other downstream 804540 3778014 ~ 3779720 (-)
G187154 NA other downstream 809417 3765863 ~ 3774843 (-)
G187156 NA other downstream 828583 3749815 ~ 3755677 (-)
G186673 NA other downstream 3193773 1389924 ~ 1390487 (-)
vamp3 vamp3,LOC107582408,LOC107751179 other upstream 362498 4974228 ~ 4989258 (-)
phf13 phf13 other upstream 881682 5493412 ~ 5505747 (-)
svbp svbp other upstream 907063 5518793 ~ 5522921 (-)
LOC111195363 snrpe other upstream 2365921 6977651 ~ 6982840 (-)
pdrg1 pdrg1 other upstream 2576886 7188616 ~ 7193252 (-)

Expression


Co-expression Network