kif17 (kif17,LOC108438632)


Basic Information

Item Value
gene id kif17
gene name kif17,LOC108438632
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 7007447 ~ 7031027 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682320.1
CTAAGCGACGGAGACGCTCAGACTGGAGGAGAAATGGTGGATTAGCTTTAGCGATGTTTCTGTAAATTCTGGGTTTTTCTGGCGGTTTCTGGCTGCAGATTCAGCTCGGAGAGGAGGAAACCTGGGAATGATGGATAACAGCGCAaaaagtCCAGTATACACTAACCACATCCTGTGAACTGTCTGGCTGGTCAATGGCTGGCTGATTGGATAGTCTTGAATCCCAAGATGGCCTCTGAGTCTGTGAAGGTGGTCATTAGATGCCGGCCTCTGAATGACCGGGAGAAGGCTCTTAACTGTAAGATGGTGGTGTCTGTTGACACCGGCTGCTGTCAGTGCTTCATTGAGAAACCGGAAGCTTCTGAGGAGCCACCCAAACAATTTACATTTGATGGGACTTACTTCATCAATCAGACGACTGAGCAGATGTACAACGAGATTGCGTATCCTCTGGTTGAGGGAGTTACAGAGGGATACAATGGGACAATCTTCGCTTATGGACAGACTGGGAGTGGTAAATCGTTCACCATGCAGGGTGTGGCGGACCCTGCAGCTCAGAGAGGGGTCATACCGAGAGCTTTCGAGCATATATTTGAGACCATTCAGTGTGCAGAAAACACTAAGTTCCTGGTGCGGGCCTCTTACCTCGAGATCTACAAAGAGGAAATAAGGGACCTTCTGGGGAAAGACAGCAAACTGAAGCTGGAGCTGAAAGAGCATCCAGAGCGCGGTGTGTACGTGCGAGATCTGTCCATGCACACGGTGCACAGCGTGGGGGAGTGCGAGCGGATCATGGAGCAGGGCTGGAAAAATCGCTCAGTGGGATACACACTCATGAACAAGGACTCCTCTCGCTCCCACTCCATATTCACCATCCACCTGGAGATCTGCAAGACAGATGCTGCTGGTGAAGACCACTTAAGAGCAGGCAAGCTCAACCTGGTGGACCTGGCCGGCAGTGAACGACAGTCCAAGACCGGTGCCACAGGTGACCGTCTTCAGGAGGCCACTAAAATCAACCTGTCCCTGTCCGCCTTGGGTAACGTCATCTCAGCACTGGTGGACGGTCGATCCAAGCACATCCCGTACCGCGACTCTAAGCTGACTCGGCTGCTGCAGGACTCTCTGGGGGGTAACACACGCACCCTCATGGTGGCCTGCCTCTCTCCTGCGGACAACAACTACGAGGAGAGCCTGAGCACCCTGCGCTACGCCAACCGCGCCAAGAGCATCCAAAACCGGCCCCGCATCAACGAGGATCCGAAGGACGCACTGCTGCGAGAGTACCAGGAAGAGATTAAGCAGCTACGGGCACTCATCTCTGGCCAGCTTGGCACCGACAACCTAAGCTCTTTCTTAGCAAGTCAGACATCAGAGGGGACTCTCGCTGTCCAGTCCAGACCCCAGAGCAGTACTGTGGAGAGTGAAGCTGAAAAGGAGAAGATTAAGCAGgagtaTGAAGGCAAGATTGCCAGGCTGCAAGCAGACTACAACGCTGAGCAGGAATCCAAAGCCAAGCTACAGGAGGACATCACTTTCTTGAGAGAATCCTATGAGTTCAAGCTTTCCAGTCTGGAGAGGTTCAGAAGTGATCGGCCACATAAGACAGGAGATACCTCTAACAAAGAGGAGGCAATTTCTGTTAATGAGTCAACACCCAAGGCTTCAGACCCAATCCAAGATGGACTCAAGGAGGATGAGCACTCAGGCGGCATCAGAGGGGGTCCTGAGGGAAAGCTAGTGCTTGTTGCCACGCCAAGCCCACTGGACCAGCAACATGTTTTGGAGAGGCTTCAGCAGCTAGAGCAGGAGTTTGTTGGGGGAGAGCAGTCCAGGAATGAGGAGCTGAGACAGCGGAGGAGGCAGCGGAAGAgtctagccaatcagaggaagAAGCAGCTGATTGACGCACTGAAGCAGGGCAGCGAGGATGGGGACAGTGTGCTGCTTAATGTGTACGACTCCATTCAGGAGGAGGTTCATGCCAAGAACAAACTGCTGGAGGGTACACAGAACAAGCTCAAAGCTGCCAAGCTGGAGATCCGGGACTTGCAGGCAGAGTTTGAGACAGAGCGGGACGACTACCTGGCTAGCATCAGACGTCTGGAGCGTGAGACGCAGCTGCAGCAGGCTATCCTGGAACGCATGGTGGGTCTGGTGCGCAGAGACTGCAACTACAGCAACCTGGACCGTTTGCGTAAAGAGGCAGTTTGGGATGAGGAGAGTGGTGTGTGGAGAGTTCCTGAGGTGCTGGTGCAGAAGACAGCACTGCCTGCAGcaGTTCCTCCTTCAGCCATGAGCAGCTCCTCAAGACTCCCAGTACGCAGGAACTCTGCCTCGGACACAGGAGAGCATTTTATGGAGGAGGAGGACCGCTATAAGGAGATGCTGAACCGGAGTGACAGCGAGCACGTTGCTAGTAACTACTTTAGGAAGAAGAGAACGAGTCCACTTTTTGTGGGAGAGCCTAGCAAGGGTCTGGCGGCAGGTAACGGACCATCCCACCCGACCACCAGCGGCTCCAGCCTCACAGCTGAGGGCCTCCTGCCCCGTCCCTTCCGCCTGGAGTCTCTGGGCATCCTGCCTGTCAGTGGCAAAGCCAAGCGCAAGAAGAACAAAACCCAGATCCTGTGTGATGGTAACTGACTGGTgaggatttttttgtttgtttttttgcttgtgtCTTCAGGGATACCCCATGTGGCTGACATTTGTGCCCTTTGTAATATCAGAGATGTAGAGCTCAAACTTTGCTGCTATAgagctgctttttattttaagtgcagACTGAAAGTTTTAGTTATTGcttggattattatttttttttgtagatattCAACAGTCACTATATCATCGCTATTGGATCATTTTGCCACTTTCTCCTTTtatataatgtgaatctggcagtggTTTTTCATATTGTCAAAATTTCAATGTAAATGGTCCAATAGAAAAGCTCTAAAATTACATACATTGGAAAGTTAAAGTGAAAGCCAGAAGTTCTTAATCaaggttttctttctttctttaatttattttctacattgtagattaatattgaagataggaaaataataaaagggaca
>XM_022682321.1
CTAAGCGACGGAGACGCTCAGACTGGAGGAGAAATGGTGGATTAGCTTTAGCGATGTTTCTGTAAATTCTGGGTTTTTCTGGCGGTTTCTGGCTGCAGATTCAGCTCGGAGAGGAGGAAACCTGGGAATGATGGATAACAGCGCAaaaagtCCAGTATACACTAACCACATCCTGTGAACTGTCTGGCTGGTCAATGGCTGGCTGATTGGATAGTCTTGAATCCCAAGATGGCCTCTGAGTCTGTGAAGGTGGTCATTAGATGCCGGCCTCTGAATGACCGGGAGAAGGCTCTTAACTGTAAGATGGTGGTGTCTGTTGACACCGGCTGCTGTCAGTGCTTCATTGAGAAACCGGAAGCTTCTGAGGAGCCACCCAAACAATTTACATTTGATGGGACTTACTTCATCAATCAGACGACTGAGCAGATGTACAACGAGATTGCGTATCCTCTGGTTGAGGGAGTTACAGAGGGATACAATGGGACAATCTTCGCTTATGGACAGACTGGGAGTGGTAAATCGTTCACCATGCAGGGTGTGGCGGACCCTGCAGCTCAGAGAGGGGTCATACCGAGAGCTTTCGAGCATATATTTGAGACCATTCAGTGTGCAGAAAACACTAAGTTCCTGGTGCGGGCCTCTTACCTCGAGATCTACAAAGAGGAAATAAGGGACCTTCTGGGGAAAGACAGCAAACTGAAGCTGGAGCTGAAAGAGCATCCAGAGCGCGGTGTGTACGTGCGAGATCTGTCCATGCACACGGTGCACAGCGTGGGGGAGTGCGAGCGGATCATGGAGCAGGGCTGGAAAAATCGCTCAGTGGGATACACACTCATGAACAAGGACTCCTCTCGCTCCCACTCCATATTCACCATCCACCTGGAGATCTGCAAGACAGATGCTGCTGGTGAAGACCACTTAAGAGCAGGCAAGCTCAACCTGGTGGACCTGGCCGGCAGTGAACGACAGTCCAAGACCGGTGCCACAGGTGACCGTCTTCAGGAGGCCACTAAAATCAACCTGTCCCTGTCCGCCTTGGGTAACGTCATCTCAGCACTGGTGGACGGTCGATCCAAGCACATCCCGTACCGCGACTCTAAGCTGACTCGGCTGCTGCAGGACTCTCTGGGGGGTAACACACGCACCCTCATGGTGGCCTGCCTCTCTCCTGCGGACAACAACTACGAGGAGAGCCTGAGCACCCTGCGCTACGCCAACCGCGCCAAGAGCATCCAAAACCGGCCCCGCATCAACGAGGATCCGAAGGACGCACTGCTGCGAGAGTACCAGGAAGAGATTAAGCAGCTACGGGCACTCATCTCTGGCCAGCTTGGCACCGACAACCTAAGCTCTTTCTTAGCAAGTCAGACATCAGAGGGGACTCTCGCTGTCCAGTCCAGACCCCAGAGCAGTACTGTGGAGAGTGAAGCTGAAAAGGAGAAGATTAAGCAGgagtaTGAAGGCAAGATTGCCAGGCTGCAAGCAGACTACAACGCTGAGCAGGAATCCAAAGCCAAGCTACAGGAGGACATCACTTTCTTGAGAGAATCCTATGAGTTCAAGCTTTCCAGTCTGGAGAGGTTCAGAAGTGATCGGCCACATAAGACAGGAGATACCTCTAACAAAGAGGAGGCAATTTCTGTTAATGAGTCAACACCCAAGGCTTCAGACCCAATCCAAGATGGACTCAAGGAGGATGAGCACTCAGGCGGCATCAGAGGGGGTCCTGAGGGAAAGCTAGTGCTTGTTGCCACGCCAAGCCCACTGGACCAGCAACATGTTTTGGAGAGGCTTCAGCAGCTAGAGCAGGAGTTTGTTGGGGGAGAGCAGTCCAGGAATGAGGAGCTGAGACAGCGGAGGAGGCAGCGGAAGAgtctagccaatcagaggaagAAGCAGCTGATTGACGCACTGAAGCAGGGCAGCGAGGATGGGGACAGTGTGCTGCTTAATGTGTACGACTCCATTCAGGAGGAGGTTCATGCCAAGAACAAACTGCTGGAGGGTACACAGAACAAGCTCAAAGCTGCCAAGCTGGAGATCCGGGACTTGCAGGCAGAGTTTGAGACAGAGCGGGACGACTACCTGGCTAGCATCAGACGTCTGGAGCGTGAGACGCAGCTGCAGCAGGCTATCCTGGAACGCATGGTGGGTCTGGTGCGCAGAGACTGCAACTACAGCAACCTGGACCGTTTGCGTAAAGAGGCAGTTTGGGATGAGGAGAGTGGTGTGTGGAGAGTTCCTGAGGTGCTGGTGCAGAAGACAGCACTGCCTGCAGTTCCTCCTTCAGCCATGAGCAGCTCCTCAAGACTCCCAGTACGCAGGAACTCTGCCTCGGACACAGGAGAGCATTTTATGGAGGAGGAGGACCGCTATAAGGAGATGCTGAACCGGAGTGACAGCGAGCACGTTGCTAGTAACTACTTTAGGAAGAAGAGAACGAGTCCACTTTTTGTGGGAGAGCCTAGCAAGGGTCTGGCGGCAGGTAACGGACCATCCCACCCGACCACCAGCGGCTCCAGCCTCACAGCTGAGGGCCTCCTGCCCCGTCCCTTCCGCCTGGAGTCTCTGGGCATCCTGCCTGTCAGTGGCAAAGCCAAGCGCAAGAAGAACAAAACCCAGATCCTGTGTGATGGTAACTGACTGGTgaggatttttttgtttgtttttttgcttgtgtCTTCAGGGATACCCCATGTGGCTGACATTTGTGCCCTTTGTAATATCAGAGATGTAGAGCTCAAACTTTGCTGCTATAgagctgctttttattttaagtgcagACTGAAAGTTTTAGTTATTGcttggattattatttttttttgtagatattCAACAGTCACTATATCATCGCTATTGGATCATTTTGCCACTTTCTCCTTTtatataatgtgaatctggcagtggTTTTTCATATTGTCAAAATTTCAATGTAAATGGTCCAATAGAAAAGCTCTAAAATTACATACATTGGAAAGTTAAAGTGAAAGCCAGAAGTTCTTAATCaaggttttctttctttctttaatttattttctacattgtagattaatattgaagataggaaaataataaaagggaca

Function

symbol description
kif17 Predicted to enable ATP hydrolysis activity; microtubule binding activity; and plus-end-directed microtubule motor activity. Acts upstream of or within cell projection organization; eye photoreceptor cell development; and photoreceptor cell outer segment organization. Located in axoneme and ciliary basal body. Part of kinesin complex. Is expressed in head; pectoral fin; pronephros; and sensory system. Orthologous to human KIF17 (kinesin family member 17).

NR:

description
kinesin-like protein KIF17 isoform X1

GO:

id name namespace
GO:0042462 eye photoreceptor cell development biological_process
GO:0007018 microtubule-based movement biological_process
GO:0030030 cell projection organization biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005930 axoneme cellular_component
GO:0005524 ATP binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K20198 KIF17; kinesin family member 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682320.1 True 3086 mRNA 0.51 15 7007447 7031027
XM_022682321.1 False 3083 mRNA 0.51 15 7007447 7031027

Neighbor

gene id symbol gene type direction distance location
sox13 sox13 coding downstream 58493 6897991 ~ 6948954 (-)
LOC103022878 NA coding downstream 178736 6812408 ~ 6828711 (-)
cdk18 cdk18,si:dkey-166c18.1,LOC108254840,LOC107654374,LOC107756627,LOC107698687 coding downstream 505051 6395390 ~ 6502396 (-)
LOC103042703 LOC103042703,LOC108437606 coding downstream 628683 6339628 ~ 6378764 (-)
LOC103023821 epha8,LOC107565732,LOC107756634,LOC107654383,LOC107582396 coding downstream 930733 5917506 ~ 6076714 (-)
sh2d5 sh2d5 coding upstream 2077 7033104 ~ 7050301 (-)
hp1bp3 hp1bp3 coding upstream 22199 7053226 ~ 7066086 (-)
LOC103037403 NA coding upstream 166173 7197200 ~ 7205391 (-)
LOC103036072 phactr3,LOC108254891 coding upstream 198446 7229473 ~ 7343221 (-)
LOC103035242 NA coding upstream 345532 7376559 ~ 7378591 (-)
G187794 NA non-coding downstream 9588 6990964 ~ 6997859 (-)
G187787 NA non-coding downstream 121350 6885187 ~ 6886097 (-)
G187766 NA non-coding downstream 205999 6775168 ~ 6801448 (-)
G187764 NA non-coding downstream 247545 6759507 ~ 6759902 (-)
G187763 NA non-coding downstream 248845 6758142 ~ 6758602 (-)
LOC111195364 NA non-coding upstream 75173 7106200 ~ 7130779 (-)
G187875 NA non-coding upstream 122056 7153083 ~ 7155349 (-)
G187878 NA non-coding upstream 152799 7183826 ~ 7184053 (-)
G187880 NA non-coding upstream 156763 7187790 ~ 7188038 (-)
G187881 NA non-coding upstream 157051 7188078 ~ 7188452 (-)
LOC111195363 snrpe other downstream 24607 6977651 ~ 6982840 (-)
svbp svbp other downstream 1484526 5518793 ~ 5522921 (-)
phf13 phf13 other downstream 1501700 5493412 ~ 5505747 (-)
vamp3 vamp3,LOC107582408,LOC107751179 other downstream 2018189 4974228 ~ 4989258 (-)
LOC103030666 kcnab2a,LOC108431628,LOC107712982,LOC107657983,LOC107582417,LOC107592856,LOC108255041,LOC103385628,LOC101463812,LOC108231619,LOC107385277,LOC106513833,LOC100709904 other downstream 2846493 3970934 ~ 4160954 (-)
pdrg1 pdrg1 other upstream 157589 7188616 ~ 7193252 (-)
G187946 mybl2,mybl2b other upstream 357370 7388397 ~ 7391026 (-)
ghrh ghrh,LOC103034597,LOC108438619 other upstream 378095 7409122 ~ 7419806 (-)
LOC111195437 NA other upstream 2920057 9951084 ~ 9956317 (-)
G188898 NA other upstream 3959790 10990817 ~ 10991394 (-)

Expression


Co-expression Network