ippk (ippk,LOC107755999,LOC107658385)


Basic Information

Item Value
gene id ippk
gene name ippk,LOC107755999,LOC107658385
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 12820875 ~ 12854393 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682394.1
GAGCCGCGTTTCCTCAGTGTGTCAGGCGGAGCGCTGGTTTTAGCTAGTCTGGAAGTTTGAAGTCGGCCTAGTTTGCTAATTCTGGAATAGCCAGGgcaagagagaaggaaaaacgACAGTTCTGCGGTTCTTGACGTGTTATGGCACTGGATAAAATGGACGAAAATGACTGGAAATACCACGGAGAGGGGAACAAGAGCCTCGTTGTTTCTCACGTCCAGcACTCCAGAGTCCTTCGCCTTTTGAAGTATCCGTCAGAAGATGCAGAGAACACGCAGCGGacgaCAGAACAAGCTTTTCAGCACATTCTTAACATAGTGGAGTACAACAGGAATGTCATGAAGCCCTTACTCGGGGAGAAATATGTACACAGTGGAGAAGTCGTCAAACTCCCGCTAGACTTTGTCAGGCAGCTGTCTTTAAAGGTACAGCAGGAACGACCAGAATTGCGTTGTGACAAAGTCATGGACACTTTCAGTGGCTGCGGCCTGTGCCTTCCCAACCTCACCCACCTCTCGCCATGCCACTTTGGAGACCACCGGCCTCCACTGTGTGTAGAAATTAAGCCAAAATGTGGTTTTCTACCCTTTTCGAGACATGTTACTAAGGAATGCAAACGAAAAGTTTGCAGATTTTGTATGCATCAACATTTTAAGTTAGCAAACGGGAAGTGGAACAGACTCAGCAGGTATTGTCCGTTGGATCTCTTCTCAGGGAGCAAACAGCGAATGTTTGTTGCAATCAAGCACTTACTGGAAGAACCACAAAACAACTTGAAAATATTTAAGggTGGAGAGTTGATATACAGCTGTAAAGACGATGCCAAGCAGCAGCCAGACCTGAACGAGCTGGTACAGCACCTGTGGCCCTACTTCCACCACAGCAACGGCCTTTATAACGGGCACCAGTCCAGTAAAGCAGTCTTTAACGAGTTCATTCAGGTGATCTGCGGCGCTCTGCTGGGCAGTGGGGACTCCAGTCGCTCGGGGGAACCCAGGAAGGTGCAGTTGGCTGAGAGCAGGTCGGTGTGTGAGGCCAGTCCTCTTCACAGAGAACTACTGCGTAGCGGCAATCATGGTCTGCCCAAAGACTCTGTCCTTGCGAAAATCCTACAGGTTCAGATGTTGGACAACCTGGATATTGAAGGAGTTTACCCGCTATACAAGAGAGTGGAGCAGTATCTGGAGGAGTTTCCtaaagagagGAACAGACTACAGGTAGATGGCCCATATGATGAAGGTTTCCTGGAGAAGGTGAAAACCTGTCCGTCTGAAGATGATGGCTCCATAGAATACGCTGTTGGAAAGGTTCTCCAGTACAGAGTCGCGATGACGGCCAAGGACTGCTCCATCATGATCACGTTCGCTCCATGTGGAGAAGATGAGAAACTACAAGCCAACTTGGAGATCCAGCCTCCGAAGCCTCGCTTCACATACTCAGTCTCCATCCTGGATTTGGACCCCAAACCTTATGACAGTATCCCGCACCAGTACAAGCTGGACTCCAAGATCGTCAACTACTACCTGCGGAGCACAACAAGCGCCCAGGATCTCCCTACATCCAACCATTACAAGGACAGGCAGGACTGCACGCTGCTCTTCCATCCTGTATGAACAACCTCGCTCCTCTCCACTTCCTCCTCACTACTCCAGAGTGCTGCTTTTGATGTGAACgacagaaaaaagcaaaaactgaaGATTAAGATGCATCCAGATATATATTcatttctttgttctttgtcaGAGGCTCCTCTCGTTGTCCTCTCCTCCCCACCTTTACGATGTGtgccatatttttatttttaaatgtgaaagtgGCCGGAAGCTCAGTGTTCTCAGTGCTTCTGAATTGGTATAATCGGTCCGTTTGTTTGGTGTTAGCCAGTGGAGCTAGTTTTTTCTGTGGGGCACATTCAAACTGGGGCTGGCCTCCTCATGCACAGTGCCTGGGTGGACCGAGGAAGACGAGGGTGAGCTGTTGCTGTAGTGCAGTCTGACTGGTAAAGAAGTGCCAAAACTGGCTTGCGTGTGGTCGTTCCTGTCACGGATTACAAATAATAGCTTTTAATTGAGAGAGGAGCCATTAAGTTGCAGGGGGTCCTCGGTATGTGTGCAAGTAAGTGTGGAGCATTATTAGTGTCTACATTTTATAgacttaattatattaaattaaagatgGTTACTTAAGGTGAAGTAAGACTACTACTGCTGTTCTACATCGGTTCCTGAGGTCTGTGCTGGCTTACAGTTTTTTAGCAGTTGGTCAGAAATATTGTACTGAACGCTTGAATGAATGCAGGGtggtgagtttgtttatttgattatcTTAAACACCCTGACTGAACTTGTTCTTTAAATACTGGGGTCTAATCTGATCTCAGTAAGACAGTACTGTATTAAAGAGTCATTATAAAGGTTCTAGGTTTTTCCTCAAGCTTCTTGAACAGTTTGAGAAGGGTAGAGAGAGACCTTTACACTCCAAACCACTCCCAACTTTACACACTACACCAAAAATGACCAgtccacacacccacaccaccaATCACACATCAAGCTACATTAAGGAGAAGTATTCAGTTACTTTACTGCAGCTTACAGGAATACTCCAGCATTTTCAGCCAATAAAGCACCTTCCTTCTCATTTAcatctatttttagtttacagcCAATACATTTTCTTCAGTACAGAGATGCATGTCCGCTGTTTGCCAGGTTTCAGTCCACTTATTTGAGTATTTTGATAAatctaatatataaaaacaaagccTAGTTGGAATTGGCAGGTGTTAAATAAAAGTGGCAAATTTTGCATTAATACACAATTTAAATGAAAGGAGAAAAGAGTCTTTGGATGTAGTGAAATATGATAGAATTTAAAATTTTGGGGAGTAACCCACCTCCGATCGctccagcattctgaaatacagagctttaAGCCGATGCTcctaacaggcttacaatgctagtgataggagTGTACAGCTGCCAATGAAAAGAaattttaaattacataaaaactgGTTCTTTATAGAGGGAAATGTGGACATTTAATGACTATATTACACAAATAATCAAGTTTCTAAGAGATTTGTCAAATCTCTCcagtgagtgtatgtgtatatgctGGAAAATATACCCAGGAAGTTGTTAAACCACTTATTGTTGGTCTAATTACTGAGGGTTTAATGAGCTACGCCCCTCGCTATACAATAACAGGCTGTTGATGTCAACACACTATCATTTTAAGCCCTGTTTGGAAGGGATAAGATTTACAGCGAAAGGGTGGGACAGGAATTCACTCTGGATACATTTTAGCATCGATGgctgagatgggagtggctactcaaTTTATGCACTGCTGTCACCTCCAAAAACCCTAGCTTGAAGCTCATCTTCAGGATTTGCATTTTGTATGTTGTAAAGCTTCTCCTTGAGGGTTGCCACAGACTTCTAGAACAACCTGAGCTGTCTGTGCATCATCACATTCAACAGAACCAAACGCCTTCTCAAGCATCTCTGTACTTCAGAAAAGCAGTGAAGAATTGCAGCAGATTTTCGACAGATTCCTTGCACAGGATTAACATTACCTGAGGTTATCTTTATGAGTGAGGAAGAGCACAatcccaaaaaataaaaataaactgacaTTGCACATTTGTATAAGACAAAATCACTGAGGATTTTCTGTAGTAATTACGTTACCCTGAAAATACAAATCACATCCCAATAGGGCACTAGTGGACAGTCCAGATCCAGAAAGTACAAATCCACTGATAGAATCTAAAAaacaaatgtcattttttttgtttgttttttgcaatactgttatctgtttttaaaactgctgcCATTGTAAATAAAGGCAGATTTATTTTGAGGTACAAATATTGGCTTATCCTTCAACTGAGTAGTGTAATATAACATTCTATTTAAATTTAGACTTGAAATCACAAatttgactttatttatttattttttgttaatatctGAAGCATCTTTGAACACATAATTAGGTCATTTATGTCATTGTTAAAACACATGGAGTCATACTAACGGTACCTCTCTACTGACCTTATTCATTAATGCCCGGGGTGGATTTTCTGGACCCGGATTGGCCACCTCTGCTAAAGAGCTTTAGAGTGGCGAACATCATGGAAAATATCTAGAACTTCTGATATGTGACAGTTAAacactatataaatacacactttttttatCGTTATTTGACCTTGTTGGGAAGACTAAACAGTTGTGGGCTGGTGCTGATAATCAATATCTGTCTATATCTGCTGATTACAGATCGAGTGATAAACCTTTTGTGTCCTTCATGCGGTTTTTGCCTCAAGTGTGACGAGCAGCAAGAAAATCCCAAACTCTGCCGCTTTGTTTCACAAGTGTGTGATTCTGTCTAGAACACACGTCCTCAGCTTCAGCAGTGTGTGATTTTGAAGTAATTATGTCGATAGTTGATtgattttctgtgatttttttttttgatcaatCATTTTGTCTGTTCCTTTTTATAAACCACTGAAGTTTGAGTTCTGTTTACCCCGTTTTATTACCCCTCCCACAGTACCTGTGCAGTTTCATGACTCATGACTGTAGTGAAGTTCAGAGGATTTTGTCAGAATTCACAGCCTTTACTCTTCACATAAacgtttttgtttattttgtata
>XM_022682395.1
GGAGCCGCGTTTCCTCAGTGTGTCAGGCGGAGCGCTGGTTTTAGCTAGTCTGGAAGTTTGAAGTCGGCCTAGTTTGCTAATTCTGGAATAGCCAGGgcaagagagaaggaaaaacgACAGTTCTGCGGTTCTTGACGTGTTATGGCACTGGATAAAATGGACGAAAATGACTGGAAATACCACGGAGAGGGGAACAAGAGCCTCGTTGTTTCTCACGTCCAGcACTCCAGAGTCCTTCGCCTTTTGAAGTATCCGTCAGAAGATGCAGAGAACACGCAGCGGacgaCAGAACAAGCTTTTCAGCACATTCTTAACATAGTGGAGTACAACAGGAATGTCATGAAGCCCTTACTCGGGGAGAAATATGTACACAGTGGAGAAGTCGTCAAACTCCCGCTAGACTTTGTCAGGCAGCTGTCTTTAAAGGTACAGCAGGAACGACCAGAATTGCGTTGTGACAAAGTCATGGACACTTTCAGTGGCTGCGGCCTGTGCCTTCCCAACCTCACCCACCTCTCGCCATGCCACTTTGGAGACCACCGGCCTCCACTGTGTGTAGAAATTAAGCCAAAATGTGGTTTTCTACCCTTTTCGAGACATGTTACTAAGGAATGCAAACGAAAAGTTTGCAGATTTTGTATGCATCAACATTTTAAGTTAGCAAACGGGAAGTGGAACAGACTCAGCAGGTATTGTCCGTTGGATCTCTTCTCAGGGAGCAAACAGCGAATGTTTGTTGCAATCAAGCACTTACTGGAAGAACCACAAAACAACTTGAAAATATTTAAGggTGGAGAGTTGATATACAGCTGTAAAGACGATGCCAAGCAGCAGCCAGACCTGAACGAGCTGGTACAGCACCTGTGGCCCTACTTCCACCACAGCAACGGCCTTTATAACGGGCACCAGTCCAGTAAAGCAGTCTTTAACGAGTTCATTCAGGTGATCTGCGGCGCTCTGCTGGGCAGTGGGGACTCCAGTCGCTCGGGGGAACCCAGGAAGGTGCAGTTGGCTGAGAGCAGGTCGGTGTGTGAGGCCAGTCCTCTTCACAGAGAACTACTGCGTAGCGGCAATCATGGTCTGCCCAAAGACTCTGTCCTTGCGAAAATCCTACAGGTTCAGATGTTGGACAACCTGGATATTGAAGGAGTTTACCCGCTATACAAGAGAGTGGAGCAGTATCTGGAGGAGTTTCCtaaagagagACTACAGGTAGATGGCCCATATGATGAAGGTTTCCTGGAGAAGGTGAAAACCTGTCCGTCTGAAGATGATGGCTCCATAGAATACGCTGTTGGAAAGGTTCTCCAGTACAGAGTCGCGATGACGGCCAAGGACTGCTCCATCATGATCACGTTCGCTCCATGTGGAGAAGATGAGAAACTACAAGCCAACTTGGAGATCCAGCCTCCGAAGCCTCGCTTCACATACTCAGTCTCCATCCTGGATTTGGACCCCAAACCTTATGACAGTATCCCGCACCAGTACAAGCTGGACTCCAAGATCGTCAACTACTACCTGCGGAGCACAACAAGCGCCCAGGATCTCCCTACATCCAACCATTACAAGGACAGGCAGGACTGCACGCTGCTCTTCCATCCTGTATGAACAACCTCGCTCCTCTCCACTTCCTCCTCACTACTCCAGAGTGCTGCTTTTGATGTGAACgacagaaaaaagcaaaaactgaaGATTAAGATGCATCCAGATATATATTcatttctttgttctttgtcaGAGGCTCCTCTCGTTGTCCTCTCCTCCCCACCTTTACGATGTGtgccatatttttatttttaaatgtgaaagtgGCCGGAAGCTCAGTGTTCTCAGTGCTTCTGAATTGGTATAATCGGTCCGTTTGTTTGGTGTTAGCCAGTGGAGCTAGTTTTTTCTGTGGGGCACATTCAAACTGGGGCTGGCCTCCTCATGCACAGTGCCTGGGTGGACCGAGGAAGACGAGGGTGAGCTGTTGCTGTAGTGCAGTCTGACTGGTAAAGAAGTGCCAAAACTGGCTTGCGTGTGGTCGTTCCTGTCACGGATTACAAATAATAGCTTTTAATTGAGAGAGGAGCCATTAAGTTGCAGGGGGTCCTCGGTATGTGTGCAAGTAAGTGTGGAGCATTATTAGTGTCTACATTTTATAgacttaattatattaaattaaagatgGTTACTTAAGGTGAAGTAAGACTACTACTGCTGTTCTACATCGGTTCCTGAGGTCTGTGCTGGCTTACAGTTTTTTAGCAGTTGGTCAGAAATATTGTACTGAACGCTTGAATGAATGCAGGGtggtgagtttgtttatttgattatcTTAAACACCCTGACTGAACTTGTTCTTTAAATACTGGGGTCTAATCTGATCTCAGTAAGACAGTACTGTATTAAAGAGTCATTATAAAGGTTCTAGGTTTTTCCTCAAGCTTCTTGAACAGTTTGAGAAGGGTAGAGAGAGACCTTTACACTCCAAACCACTCCCAACTTTACACACTACACCAAAAATGACCAgtccacacacccacaccaccaATCACACATCAAGCTACATTAAGGAGAAGTATTCAGTTACTTTACTGCAGCTTACAGGAATACTCCAGCATTTTCAGCCAATAAAGCACCTTCCTTCTCATTTAcatctatttttagtttacagcCAATACATTTTCTTCAGTACAGAGATGCATGTCCGCTGTTTGCCAGGTTTCAGTCCACTTATTTGAGTATTTTGATAAatctaatatataaaaacaaagccTAGTTGGAATTGGCAGGTGTTAAATAAAAGTGGCAAATTTTGCATTAATACACAATTTAAATGAAAGGAGAAAAGAGTCTTTGGATGTAGTGAAATATGATAGAATTTAAAATTTTGGGGAGTAACCCACCTCCGATCGctccagcattctgaaatacagagctttaAGCCGATGCTcctaacaggcttacaatgctagtgataggagTGTACAGCTGCCAATGAAAAGAaattttaaattacataaaaactgGTTCTTTATAGAGGGAAATGTGGACATTTAATGACTATATTACACAAATAATCAAGTTTCTAAGAGATTTGTCAAATCTCTCcagtgagtgtatgtgtatatgctGGAAAATATACCCAGGAAGTTGTTAAACCACTTATTGTTGGTCTAATTACTGAGGGTTTAATGAGCTACGCCCCTCGCTATACAATAACAGGCTGTTGATGTCAACACACTATCATTTTAAGCCCTGTTTGGAAGGGATAAGATTTACAGCGAAAGGGTGGGACAGGAATTCACTCTGGATACATTTTAGCATCGATGgctgagatgggagtggctactcaaTTTATGCACTGCTGTCACCTCCAAAAACCCTAGCTTGAAGCTCATCTTCAGGATTTGCATTTTGTATGTTGTAAAGCTTCTCCTTGAGGGTTGCCACAGACTTCTAGAACAACCTGAGCTGTCTGTGCATCATCACATTCAACAGAACCAAACGCCTTCTCAAGCATCTCTGTACTTCAGAAAAGCAGTGAAGAATTGCAGCAGATTTTCGACAGATTCCTTGCACAGGATTAACATTACCTGAGGTTATCTTTATGAGTGAGGAAGAGCACAatcccaaaaaataaaaataaactgacaTTGCACATTTGTATAAGACAAAATCACTGAGGATTTTCTGTAGTAATTACGTTACCCTGAAAATACAAATCACATCCCAATAGGGCACTAGTGGACAGTCCAGATCCAGAAAGTACAAATCCACTGATAGAATCTAAAAaacaaatgtcattttttttgtttgttttttgcaatactgttatctgtttttaaaactgctgcCATTGTAAATAAAGGCAGATTTATTTTGAGGTACAAATATTGGCTTATCCTTCAACTGAGTAGTGTAATATAACATTCTATTTAAATTTAGACTTGAAATCACAAatttgactttatttatttattttttgttaatatctGAAGCATCTTTGAACACATAATTAGGTCATTTATGTCATTGTTAAAACACATGGAGTCATACTAACGGTACCTCTCTACTGACCTTATTCATTAATGCCCGGGGTGGATTTTCTGGACCCGGATTGGCCACCTCTGCTAAAGAGCTTTAGAGTGGCGAACATCATGGAAAATATCTAGAACTTCTGATATGTGACAGTTAAacactatataaatacacactttttttatCGTTATTTGACCTTGTTGGGAAGACTAAACAGTTGTGGGCTGGTGCTGATAATCAATATCTGTCTATATCTGCTGATTACAGATCGAGTGATAAACCTTTTGTGTCCTTCATGCGGTTTTTGCCTCAAGTGTGACGAGCAGCAAGAAAATCCCAAACTCTGCCGCTTTGTTTCACAAGTGTGTGATTCTGTCTAGAACACACGTCCTCAGCTTCAGCAGTGTGTGATTTTGAAGTAATTATGTCGATAGTTGATtgattttctgtgatttttttttttgatcaatCATTTTGTCTGTTCCTTTTTATAAACCACTGAAGTTTGAGTTCTGTTTACCCCGTTTTATTACCCCTCCCACAGTACCTGTGCAGTTTCATGACTCATGACTGTAGTGAAGTTCAGAGGATTTTGTCAGAATTCACAGCCTTTACTCTTCACATAAacgtttttgtttattttgtata

Function

symbol description
ippk Enables inositol pentakisphosphate 2-kinase activity. Acts upstream of or within epithelial cilium movement involved in determination of left/right asymmetry and melanosome transport. Located in centrosome and ciliary basal body. Is expressed in axial mesoderm; blastodisc; germ ring; margin; and tail bud. Orthologous to human IPPK (inositol-pentakisphosphate 2-kinase).

NR:

description
PREDICTED: inositol-pentakisphosphate 2-kinase

GO:

id name namespace
GO:0032402 melanosome transport biological_process
GO:0007368 determination of left/right symmetry biological_process
GO:0016310 phosphorylation biological_process
GO:0005813 centrosome cellular_component
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0035299 inositol pentakisphosphate 2-kinase activity molecular_function

KEGG:

id description
K10572 IPPK; inositol-pentakisphosphate 2-kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682394.1 True 4679 mRNA 0.42 13 12820875 12854392
XM_022682395.1 False 4674 mRNA 0.42 13 12820875 12854393

Neighbor

gene id symbol gene type direction distance location
LOC111195440 NA coding downstream 35690 12770735 ~ 12785185 (-)
LOC103030591 LOC108435310,LOC108281021,LOC107715788,LOC107659540,LOC107575639 coding downstream 64692 12714488 ~ 12756183 (-)
gpr61 gpr61,LOC108434964 coding downstream 133757 12673366 ~ 12687118 (-)
LOC103029205 LOC103029205,LOC108435351,LOC107659543,LOC107715787 coding downstream 154656 12662572 ~ 12666219 (-)
sypl2 NA coding downstream 208858 12594526 ~ 12612017 (-)
LOC103025083 LOC108431510,LOC107586924,LOC107756006,LOC107593103,LOC107704447,LOC105893506 coding upstream 26429 12880822 ~ 12884782 (-)
shisa5 NA coding upstream 50937 12905330 ~ 12922980 (-)
nuf2 nuf2 coding upstream 71663 12926056 ~ 12940460 (-)
LOC103034476 zgc:77375,LOC108431553,LOC108254961,LOC107700631,LOC107758152 coding upstream 98117 12952510 ~ 12972311 (-)
LOC103027102 isy1,LOC108431508,LOC108254962,LOC107700632 coding upstream 119547 12973940 ~ 12980817 (-)
G189352 NA non-coding downstream 52164 12768010 ~ 12768711 (-)
G189349 NA non-coding downstream 109862 12709673 ~ 12711013 (-)
G189348 rrp9,LOC107659541 non-coding downstream 116163 12704268 ~ 12704712 (-)
G189345 sort1 non-coding downstream 162111 12653060 ~ 12658764 (-)
G189344 sort1 non-coding downstream 169785 12649311 ~ 12651090 (-)
G189376 NA non-coding upstream 25552 12879945 ~ 12880344 (-)
G189380 NA non-coding upstream 36441 12890834 ~ 12891269 (-)
G189381 NA non-coding upstream 40470 12894863 ~ 12896608 (-)
G189385 NA non-coding upstream 48544 12902937 ~ 12903160 (-)
G189402 NA non-coding upstream 175777 13030170 ~ 13032240 (-)
LOC111195455 NA other downstream 106843 12612611 ~ 12714032 (-)
G189335 psma5,LOC107685984 other downstream 201309 12614912 ~ 12619566 (-)
mapkapk3 mapkapk3,LOC102784126,LOC107384936,LOC101473327,LOC102305022,LOC102199310,LOC106525176 other downstream 425343 12298049 ~ 12395532 (-)
eogt eogt,LOC107729408 other downstream 642265 12160542 ~ 12178610 (-)
G189055 NA other downstream 776582 12043913 ~ 12044293 (-)
tsen2 NA other upstream 208406 13062799 ~ 13076742 (-)
LOC103024926 dynlrb1,LOC106565026 other upstream 2464250 15318643 ~ 15322175 (-)
LOC103026676 LOC108424672,LOC108254855,LOC107691347,LOC107749448,LOC107685659,LOC107551122,LOC106582641 other upstream 2554814 15409207 ~ 15466584 (-)
G190405 fbln2,LOC108424659,LOC107727849,LOC107691338 other upstream 3491308 16345701 ~ 16460928 (-)
ptpdc1 NA other upstream 3715230 16569623 ~ 16599317 (-)

Expression


Co-expression Network