LOC103037635


Basic Information

Item Value
gene id LOC103037635
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 19315818 ~ 19346307 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682571.1
ACTTCAGTCCAGCGTGGGTCATCATGAGTCGAGCCACGCTCAGCGCCGCTCTACTGGGGCtcttatttgtgtgttttaccACGGCCCCGCCCGTACAGGAAGATGTTGAAATCAGCAGCTTCCACATCAACTCCACCGTCACCAGCCGCTACGCCATCACGGTCATCACCAGCCGGGTAAAAAATCAACACACAGATTCCAAGGAAATCCATTTTGAGGTCAAGATTCCCAAGAATGCCTTCATCAGCAAATTCAGAATGACTATAGAGGGGAAGACGTATGATGGAGTGGTGAAGGAGAAGGAAGCAGCTCAGCAGCAGTACAGTGAAGCAGTCGCTCGAGGAGAAAGTGCCGGAGTGGTCAGttcAGTGGGTCGGACTCTGGAGGAGTTTAAAACCTCAGTGACGGTCGCGGCTCTCAGTAAAGTCACCTTTGAACTCACCTATGAGGAGCTGCTGCAGCGACGCCACGGAAAATATGATCTACTGATCAACGCTCAGCCCATGCAGCCTGTAGCAGATTTTAAGATTGACGTCTCTATTAAAGAGAATCCAGGCATTTCCTTCCTGGAGGTGAAAGGAGATCTGAACAGTGGTGAACTGGCCAATGCTGTGACCACAACACGATCTGGCGAAGAGGCATGGATACACTTCTACCCCACCAGTGATCAGCAGACCACGTGTTCCAGCTGCACAGAAAATGGACTGAATGGAGATTTAATCATAACGTATGATGTGGAGAGAACAAACCCCAACGGAGACATACAGataatgaataaatattttgtgcACTTCTTTGCTCCCGCTAATTTGATTCGAACTCCGAAAAATGTGGTCTTCATCATTGACCGGAGCGGCTCCATGTACGGCAGGAAAATCCAGCAGACCCGGAGTGCATTGGATCATATTTTGGGAGACCTCGATAGTGGGGACCACTTTGGGCTGATCCTGTTTGACAGTAGTGTCGACGTTTGGAAACGCGAGCTGATCCAGGCCACCAGCAGCAACGTGAATTTAGCGAAGCAGTTTGTGAAAACCATTCAGGATAGAGGAACCACTGACATCAATTCTGCAGTTCTGAAGGGGGTGGAGATGCTCAACAAACACCAACGAGAAGGCTCCGCCTCCATCCTCATTCTGTTGACTGATGGAGCCCCAAatacagGTGAAAGCAATCCAGACAGGATTCGAGTCAATGTGAAAGAGGCCATCGGGAAGAAGATGTCTCTGTACTGTCTGGGCTTTGGTTTTGATGTTAACTATGATTTTCTGGAGAAGATGGCTCTGGAGAACAACGGATTCGCTCGCAGGATCTACGAGGACTCGGATGCTTCTGACCAACTACAGGGTTTCTATAAGGAGGTCGCCACCCTTCTCTTATTCGATCTTGAGCTCCTCTATGAGGGAGCGTCGAACCTCACCGAGACTGCTTACAGTATGTACTACAACGGCTCTGAGATCATAGTCGCCGGAGAAATCACAAACAACAGCCTGGAGAGTTTCAAAGTGGAGGTCGTTGCATTCTCGagAAGTAATAAAGTGACATATGCGAAGGATGTGTCTCTGAAAGCTCTACCTGATGTTGAACCTCAACATGAAAACGTTACCCAGCGAGTCTGGGCTTACCTTAAAGTCAAACAGCTGCTGAAAAAAGAATTGACTCTTACGGGGGCGGAGAAAGAAGCAGCCAAGAAAGAAGCTCTGGATCTCTCTCTTCAGTACAGTTTTGTGACTCCACTTGCGTCTATGGTGGTCACCAAACCCCAGAAATCAGACACACAGATCGCCCACAAACCTGAAGAGAgaggagtcagaggagaaggaggaagagTAGGACATGGACAAGTAGTACCAAGAGTACCATATGGAGGAGGAGGATATCATGGACACCATTTCTCATTAGGAGGAAGTAGCAGATTAGGAGCAGGAAGGGGATATGCAGGAGGAGCAACAgGATCCAATGGACAGCCAGGTGGAGGAAGCAGATTACGATACACCATAAGAGGACCACCTCGAGAGCCAGggttttttttttcacccccAGTGCTTTCTGCATCCCCAGATTACGGTTATGATGATTATGATAGTCCACCTCAACCAATGCCGACTAGGATCAGCAGCATTTTGTGGAACCCACCCCCTAAAGcTGCAGTGAAGTCCGTGAGGTTTTTATCCTCCTCTAGTGGTCAGTCTAAGCCTCTCTGCTACGACGTTCCTTCAGCTTCCAAACTCCTACTTCTGAAGGACCTCTCTTCAGGATTCTCTATGAGCGGTGAGCTGACCCAATCCGGGACGGGTTTCGATCAAATTGCACTTCATTATAAAACGGATCATCACCTGAGCGTCAGCACCGCTGATATCAACTTCTCTGATGGTCAGAAAGCGTTCAGGCTCGTTTGGGGACAGGTACCCACCGTGCATCAGGCAGACGGTGTGTCGGTGATTCTGAGGGACAGTGAACTGGACGTCACTTTGGGAGGAGTGCGTGTTGTGATTCTCCTTCATAAGGAAGGTGGAAATGTGTTTCTCTGGCCGGCTGTTCGTCAACAACCCAAGCATGGCAGCTTACAGGGCATTCTGGCAAAAACCAGCCTGCAGTATGAGGAGCTGCCTGGATTTATAATCAAAATCAGTGATCAGGAAGAGGCTGCATCCTTgaGCACCGCTAAAGACTACAGACTCTCTTCAGCCCCGATTGTTGGATGCTGGGTGGTACGGCTGCAGTTTGCTCTGCAGGGAGAGCTCTCTGACTTCACTGTGGCTCAGCTTTAGAGAAAACATCCTTTTTTCCAGAGagtgaagaaagagaaaagaatcaGTTTTGGttgaaaataaaatgctttaatgttaGAAGCTGGAAAGCAATGCTGGTATAAACTGTAGAAAGAGACGTGTGAGTAGTGCTGCTTTACGCTTAATGTTTGAACTGGTGATCTCTCTGTGATGGATGACGTAAATTACAGTAAACTTTAAATTAGAGCTGAACcacaaattatattagagtagtaATTGGTCAAGATGTTTGTGGATAAGGTTGGTAACGTGTGAATGAACAAAGTTtaatgtaacaataaaaaatgaaatggcaAAATCTcaaaat

Function

GO: NA

KEGG:

id description
ko00350 Tyrosine metabolism
ko00360 Phenylalanine metabolism
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682571.1 True 3099 mRNA 0.47 28 19315818 19346307

Neighbor

gene id symbol gene type direction distance location
LOC111195448 NA coding downstream 3059 19282103 ~ 19312759 (-)
LOC103038392 NA coding downstream 34822 19258732 ~ 19280996 (-)
LOC103038073 NA coding downstream 76149 19217715 ~ 19239669 (-)
LOC103035880 LOC103035880 coding downstream 102162 19206055 ~ 19213656 (-)
LOC103035575 NA coding downstream 112488 19199678 ~ 19203330 (-)
LOC103044861 NA coding upstream 12106 19358413 ~ 19390900 (-)
LOC103044542 NA coding upstream 45486 19391793 ~ 19417508 (-)
LOC103044255 wnk2,LOC108443687,LOC107743253,LOC107694869 coding upstream 77733 19424040 ~ 19486077 (-)
LOC103037097 LOC108443694,LOC107743251,LOC107694868,LOC107578651,LOC107696460 coding upstream 188360 19534667 ~ 19564176 (-)
LOC103035977 tkta,LOC108443693,LOC107578334,LOC107582382,LOC107743250,LOC107694867 coding upstream 229391 19575698 ~ 19604021 (-)
G191329 NA non-coding downstream 62729 19252876 ~ 19253089 (-)
G191328 NA non-coding downstream 66365 19249204 ~ 19249453 (-)
G191326 NA non-coding downstream 86644 19228734 ~ 19229174 (-)
G191321 NA non-coding downstream 119432 19194927 ~ 19196386 (-)
G191296 NA non-coding downstream 215994 19045406 ~ 19099824 (-)
G191337 NA non-coding upstream 71924 19418231 ~ 19428960 (-)
G191338 NA non-coding upstream 186639 19532946 ~ 19562551 (-)
LOC111195401 NA non-coding upstream 264077 19610384 ~ 19618060 (-)
G191357 NA non-coding upstream 273869 19620176 ~ 19620410 (-)
LOC103035771 NA non-coding upstream 274993 19621300 ~ 19623690 (-)
LOC103032794 tusc2,tusc2b,LOC107593101,LOC107587002,LOC107695626 other downstream 413533 18897509 ~ 18902285 (-)
LOC111195399 wu:fd14a01,myhz1.2,LOC108444093,LOC108443910,LOC108444092,LOC108416711,LOC108416675,LOC108416954,LOC108443907,LOC108254798,LOC108261508,LOC107737926,LOC107575389,LOC108416101,LOC107681327,LOC108261437,LOC108254800,LOC106570860,LOC102780693,LOC101068441,LOC108417180,LOC101164155,LOC105899468,LOC107378336,LOC107378334,LOC101071797,LOC105890352,LOC107372732,LOC107093413,LOC108254796 other downstream 516903 18708319 ~ 18798915 (-)
LOC103041510 LOC108414096 other downstream 1000481 18311452 ~ 18315337 (-)
mrpl20 mrpl20 other downstream 1102288 18139363 ~ 18213530 (-)
LOC103036492 card19,LOC108443695 other upstream 165014 19511321 ~ 19528580 (-)
brk1 brk1,BRK1,LOC106565571 other upstream 1753040 21099347 ~ 21103218 (-)
npff npffl,npff,LOC107738884,LOC107677943,LOC107669931 other upstream 2083709 21430016 ~ 21436453 (-)
elmo2 elmo2,LOC106583331 other upstream 2164617 21510924 ~ 21544831 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other upstream 2500662 21846969 ~ 21851642 (-)

Expression


Co-expression Network