c22h1orf106 (LOC108410711,LOC107727857,LOC107655074)


Basic Information

Item Value
gene id c22h1orf106
gene name LOC108410711,LOC107727857,LOC107655074
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 23104254 ~ 23144408 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682662.1
tagtgtgttagagcgagtgagagaaagaagagagagagagagttgtagtgtgtgagagtgagcgTGAGAGCTGTTCTTAGTCGATCTGTGGCTGTGATTTCAGCGAACTTTTATCTTTCCTTCATCTTCAAATCTCTTTATACTTTTACCATGGGGCCTTCACTGGAAGTGAAGACATAGTGTTTTGGGTTGAGGAGCACCAGCAGAGCAGAAGAGATGGAGGCCAAGGAGGAGATCAGTGACACGGACAGTGGGATCATACTGCATTCAGGACCGGACAGTCCGACCACAGTGATGAAGGACGTgagcacacacactcgcgctgTGAAGTTAAAGCGGCAGTCTCTGGAGGACAGACTGGAACTGTGTTTACTGGAACTGAAAAAACTCTGTATCAGAGAGGCTGAACTCACGGGACACTTGTCATCAGACTACCCTCTGCTGCCAGGAGAGAAACCCCCGCAGATCAGGCGCCGCATCGGAGCGGCTTTTAAGCTGGATGAGCAGAGCATCCTGCACCGTGGAGGAGAGGACTCGGAGCTGCGCTCTGTGGAGGCTAAGCTGGcactgcagcagcagatccacGTCGCTGCGCGCAAACTGTACCAGGAGGAGCATCTCAGTAAGGCGGTGAGGAAGAGCAGACTGCAGCAGAGCAAGCGTGAGGAACAGAAGCTCAAAGAGCTGCAGGAGGCAGTGTTCCAGCTCCGCCTCGACCACGGGCGCTCCTCTCCGCGCCCGGGCTTGATCTTGCAGAAACTTCAGGGCACATCAGACGACAGCTCATTATCAGACTCTGCTGTGTTGGACGAAGAGGAGCTAACGAGCCAGTCGTCCCAGGTGTCATCAGAGCCCCCTCCTACAGTAGACTCACTTCCTGTCCCCCCAGGCACTTCCCATCGTCCTCTCACACCCACCGGCACCTCGCAACTACTGCAGCTACCTGTGCCCAGCCCCCGCCCGCTACTCACATTGCCCCTCAAGCCTTTGCACCCCTGCCCCTCCCCCACCATGGAGCATGACCCTGCCCCCATCCAGAACTCCCCTTGGACAGAATCCAGCCTGGATCAGCCTTACCAGAAGAAGAAGTCTCGGTCCAGCAGCACCAAATCTAGTCCTGCTGTTACTCCAACACTGCCTCCACTGAAAGCATGTTTAGAGGAGGCAGGCATCACGCTGCAGGTACCCGGGCATGCCTCACTGAGACACATACAGTCCAGCAGTGCCCCGTCTACTCCAGAGCTCCATCTGCGGAGAGGCTATTCTCTCAGAGTTCCCAACTCTGAGCCACCGAATGACGTGGAGCTGGACAGGGGTCGTTCGAGGGCACCCAGGAGGCGACTCACCGACGTTTTACCCTCACCGTCACCAGAATACTCCCCCATACGCTTAGCCACTCCAAACCCCATGTACCACGACAGCTCAGAGGACAGTAACTCTGAGCACTCGTCAGCTCCTTCGTACATGAGCTCAACCTGCCAGGACCATTCCTTTGAGCTCCAGCGCCAAGCGTGCCAATCCCACCAATCCCATTACAGATACCATTACCCCAGCCCTACTGATCATTACATTCCACAGCCCTACAGCCCCCTCAGCCACTACAAAACCCCTCCTCCCCAACTGTCCCCCAACTACTACAGGGGGTACATGGACGAGGGGCGGAGCCACGACATGGACATGAGTAGGATGTACGTCAGGCCCCAGCCCCCACCTTCCTGCGCCAATGGACACTACGAGTACTGGTACGAGGAGGCGCCACCACACCCGCTCTACAGGCAAATCCCTGCTCACGTCAAGCTCTCCAGGGCTCCATCACTTAGGGAGTACCCCCACCACCCCAGCAGGGGGCTCCCTCGCCAAGTAGTTTCAGAAGAGCTGAAGTCGTGGCACCAACGAAGCCAGTTACGGCCGCCCCGACCACGCTCCTTGGACAGGCATCGGCAGGGCGCGGTGCGGGTCAGAACCCTGCCTGGACAGGAGTCGCCACTACCTCGTCAACATGGCTTCCATGACCCACAGcAGGTACCCCAAAGACGGATCATCCAGAGGACGGCTGACGGCACACCGATCAAATGGTACGAAGACGACGACGCAGAGATCGTTAGTCAAGTGTAGCTGAACAAACATCGCTGCAGAAATACggatatttatgatttatttattgaacCACCAGCTGAACATGATGTTGTGAGGATTATCTGTGTAGTTGGTCTAATCTTGATCTTTtgatatcgtttttttttttttttttttttttacgaacaATGAACTTTTTTTGGTACTGTTTTATACTGAACCTCTGCTGTGAAAGACAATGCTGTTAATAGAATAGATTTTACTATCTCGACTTTTTTgtacaacaaaagaaaaatatataatttcttaCTAAAATGAGCTTCTATGTGTCATCTTACAATCTGTGTTgctaataaagcaaataaaatcaataaaataaaaacatagagAGATTA
>XM_022682663.1
agagagagagagagagagagagaggagagagagagagagagatggcgcTACTGGAGAGTTCGTAAAGTTTcagagtgtgtgtaatgagcaCAGTGGGGGGCCTTCACTGGAAGTGAAGACATAGTGTTTTGGGTTGAGGAGCACCAGCAGAGCAGAAGAGATGGAGGCCAAGGAGGAGATCAGTGACACGGACAGTGGGATCATACTGCATTCAGGACCGGACAGTCCGACCACAGTGATGAAGGACGTgagcacacacactcgcgctgTGAAGTTAAAGCGGCAGTCTCTGGAGGACAGACTGGAACTGTGTTTACTGGAACTGAAAAAACTCTGTATCAGAGAGGCTGAACTCACGGGACACTTGTCATCAGACTACCCTCTGCTGCCAGGAGAGAAACCCCCGCAGATCAGGCGCCGCATCGGAGCGGCTTTTAAGCTGGATGAGCAGAGCATCCTGCACCGTGGAGGAGAGGACTCGGAGCTGCGCTCTGTGGAGGCTAAGCTGGcactgcagcagcagatccacGTCGCTGCGCGCAAACTGTACCAGGAGGAGCATCTCAGTAAGGCGGTGAGGAAGAGCAGACTGCAGCAGAGCAAGCGTGAGGAACAGAAGCTCAAAGAGCTGCAGGAGGCAGTGTTCCAGCTCCGCCTCGACCACGGGCGCTCCTCTCCGCGCCCGGGCTTGATCTTGCAGAAACTTCAGGGCACATCAGACGACAGCTCATTATCAGACTCTGCTGTGTTGGACGAAGAGGAGCTAACGAGCCAGTCGTCCCAGGTGTCATCAGAGCCCCCTCCTACAGTAGACTCACTTCCTGTCCCCCCAGGCACTTCCCATCGTCCTCTCACACCCACCGGCACCTCGCAACTACTGCAGCTACCTGTGCCCAGCCCCCGCCCGCTACTCACATTGCCCCTCAAGCCTTTGCACCCCTGCCCCTCCCCCACCATGGAGCATGACCCTGCCCCCATCCAGAACTCCCCTTGGACAGAATCCAGCCTGGATCAGCCTTACCAGAAGAAGAAGTCTCGGTCCAGCAGCACCAAATCTAGTCCTGCTGTTACTCCAACACTGCCTCCACTGAAAGCATGTTTAGAGGAGGCAGGCATCACGCTGCAGGTACCCGGGCATGCCTCACTGAGACACATACAGTCCAGCAGTGCCCCGTCTACTCCAGAGCTCCATCTGCGGAGAGGCTATTCTCTCAGAGTTCCCAACTCTGAGCCACCGAATGACGTGGAGCTGGACAGGGGTCGTTCGAGGGCACCCAGGAGGCGACTCACCGACGTTTTACCCTCACCGTCACCAGAATACTCCCCCATACGCTTAGCCACTCCAAACCCCATGTACCACGACAGCTCAGAGGACAGTAACTCTGAGCACTCGTCAGCTCCTTCGTACATGAGCTCAACCTGCCAGGACCATTCCTTTGAGCTCCAGCGCCAAGCGTGCCAATCCCACCAATCCCATTACAGATACCATTACCCCAGCCCTACTGATCATTACATTCCACAGCCCTACAGCCCCCTCAGCCACTACAAAACCCCTCCTCCCCAACTGTCCCCCAACTACTACAGGGGGTACATGGACGAGGGGCGGAGCCACGACATGGACATGAGTAGGATGTACGTCAGGCCCCAGCCCCCACCTTCCTGCGCCAATGGACACTACGAGTACTGGTACGAGGAGGCGCCACCACACCCGCTCTACAGGCAAATCCCTGCTCACGTCAAGCTCTCCAGGGCTCCATCACTTAGGGAGTACCCCCACCACCCCAGCAGGGGGCTCCCTCGCCAAGTAGTTTCAGAAGAGCTGAAGTCGTGGCACCAACGAAGCCAGTTACGGCCGCCCCGACCACGCTCCTTGGACAGGCATCGGCAGGGCGCGGTGCGGGTCAGAACCCTGCCTGGACAGGAGTCGCCACTACCTCGTCAACATGGCTTCCATGACCCACAGcAGGTACCCCAAAGACGGATCATCCAGAGGACGGCTGACGGCACACCGATCAAATGGTACGAAGACGACGACGCAGAGATCGTTAGTCAAGTGTAGCTGAACAAACATCGCTGCAGAAATACggatatttatgatttatttattgaacCACCAGCTGAACATGATGTTGTGAGGATTATCTGTGTAGTTGGTCTAATCTTGATCTTTtgatatcgtttttttttttttttttttttttacgaacaATGAACTTTTTTTGGTACTGTTTTATACTGAACCTCTGCTGTGAAAGACAATGCTGTTAATAGAATAGATTTTACTATCTCGACTTTTTTgtacaacaaaagaaaaatatataatttcttaCTAAAATGAGCTTCTATGTGTCATCTTACAATCTGTGTTgctaataaagcaaataaaatcaataaaataaaaacatagagAGATTA
>XM_022682664.1
cagggttagtgtgttagagcgagtgagagaaagaagagagagagagagttgtagtgtgtgagagtgagcgTGAGAGCTGTTCTTAGTCGATCTGTGGCTGTGATTTCAGCGAACTTTTATCTTTCCTTCATCTTCAAATCTCTTTATACTTTTACCATGGGGCCTTCACTGGAAGTGAAGACATAGTGTTTTGGGTTGAGGAGCACCAGCAGAGCAGAAGAGATGGAGGCCAAGGAGGAGATCAGTGACACGGACAGTGGGATCATACTGCATTCAGGACCGGACAGTCCGACCACAGTGATGAAGGACGTgagcacacacactcgcgctgTGAAGTTAAAGCGGCAGTCTCTGGAGGACAGACTGGAACTGTGTTTACTGGAACTGAAAAAACTCTGTATCAGAGAGGCTGAACTCACGGGACACTTGTCATCAGACTACCCTCTGCTGCCAGGAGAGAAACCCCCGCAGATCAGGCGCCGCATCGGAGCGGCTTTTAAGCTGGATGAGCAGAGCATCCTGCACCGTGGAGGAGAGGACTCGGAGCTGCGCTCTGTGGAGGCTAAGCTGGcactgcagcagcagatccacGTCGCTGCGCGCAAACTGTACCAGGAGGAGCATCTCAGTAAGGCGGTGAGGAAGAGCAGACTGCAGCAGAGCAAGCGTGAGGAACAGAAGCTCAAAGAGCTGCAGGAGGCAGTGTTCCAGCTCCGCCTCGACCACGGGCGCTCCTCTCCGCGCCCGGGCTTGATCTTGCAGAAACTTCAGGGCACATCAGACGACAGCTCATTATCAGACTCTGCTGTGTTGGACGAAGAGGAGCTAACGAGCCAGTCGTCCCAGGTGTCATCAGAGCCCCCTCCTACAGTAGACTCACTTCCTGTCCCCCCAGGCACTTCCCATCGTCCTCTCACACCCACCGGCACCTCGCAACTACTGCAGCTACCTGTGCCCAGCCCCCGCCCGCTACTCACATTGCCCCTCAAGCCTTTGCACCCCTGCCCCTCCCCCACCATGGAGCATGACCCTGCCCCCATCCAGAACTCCCCTTGGACAGAATCCAGCCTGGATCAGCCTTACCAGAAGAAGAAGTCTCGGTCCAGCAGCACCAAATCTAGTCCTGCTGTTACTCCAACACTGCCTCCACTGAAAGCATGTTTAGAGGAGGCAGGCATCACGCTGCAGGTACCCGGGCATGCCTCACTGAGACACATACAGTCCAGCAGTGCCCCGTCTACTCCAGAGCTCCATCTGCGGAGAGGCTATTCTCTCAGAGTTCCCAACTCTGAGCCACCGAATGACGTGGAGCTGGACAGGGGTCGTTCGAGGGCACCCAGGAGGCGACTCACCGACGTTTTACCCTCACCGTCACCAGAATACTCCCCCATACGCTTAGCCACTCCAAACCCCATGTACCACGACAGCTCAGAGGACAGTAACTCTGAGCACTCGTCAGCTCCTTCGTACATGAGCTCAACCTGCCAGGACCATTCCTTTGAGCTCCAGCGCCAAGCGTGCCAATCCCACCAATCCCATTACAGATACCATTACCCCAGCCCTACTGATCATTACATTCCACAGCCCTACAGCCCCCTCAGCCACTACAAAACCCCTCCTCCCCAACTGTCCCCCAACTACTACAGGGGGTACATGGACGAGGGGCGGAGCCACGACATGGACATGAGTAGGATGTACGTCAGGCCCCAGCCCCCACCTTCCTGCGCCAATGGACACTACGAGTACTGGTACGAGGAGGCGCCACCACACCCGCTCTACAGGCAAATCCCTGCTCACGTCAAGCTCTCCAGGGCTCCATCACTTAGGGAGTACCCCCACCACCCCAGCAGGGGGCTCCCTCGCCAAGTAGTTTCAGAAGAGCTGAAGTCGTGGCACCAACGAAGCCAGTTACGGCCGCCCCGACCACGCTCCTTGGACAGGCATCGGCAGGGCGCGGTGCGGGTCAGAACCCTGCCTGGACAGGAGTCGCCACTACCTCGTCAACATGGCTTCCATGACCCACAGGTACCCCAAAGACGGATCATCCAGAGGACGGCTGACGGCACACCGATCAAATGGTACGAAGACGACGACGCAGAGATCGTTAGTCAAGTGTAGCTGAACAAACATCGCTGCAGAAATACggatatttatgatttatttattgaacCACCAGCTGAACATGATGTTGTGAGGATTATCTGTGTAGTTGGTCTAATCTTGATCTTTtgatatcgtttttttttttttttttttttttacgaacaATGAACTTTTTTTGGTACTGTTTTATACTGAACCTCTGCTGTGAAAGACAATGCTGTTAATAGAATAGATTTTACTATCTCGACTTTTTTgtacaacaaaagaaaaatatataatttcttaCTAAAATGAGCTTCTATGTGTCATCTTACAATCTGTGTTgctaataaagcaaataaaatcaataaaataaaaacatagagAGATTA

Function

NR:

description
PREDICTED: uncharacterized protein C1orf106 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682662.1 False 2471 mRNA 0.53 10 23104254 23129680
XM_022682663.1 False 2415 mRNA 0.53 10 23104254 23144408
XM_022682664.1 True 2474 mRNA 0.53 10 23104254 23129686

Neighbor

gene id symbol gene type direction distance location
rnpep rnpep coding downstream 5690 23087526 ~ 23098564 (-)
LOC103045443 LOC108410710,LOC107727873,LOC107560790,LOC107685706,LOC107749489 coding downstream 22126 23074119 ~ 23082128 (-)
LOC103044418 adipor1 coding downstream 32052 23063167 ~ 23072202 (-)
rabif rabif,LOC107601129,LOC107581890,LOC107749491 coding downstream 67462 23033475 ~ 23036792 (-)
LOC103025998 kdm5b,LOC107600688,LOC107685701,LOC107561016,LOC107749493 coding downstream 75653 22996094 ~ 23028601 (-)
LOC103045076 gpr25 coding upstream 15260 23159668 ~ 23162419 (-)
LOC103047010 syt6,LOC107727826,LOC107560238,LOC107655078 coding upstream 64477 23208885 ~ 23282019 (-)
nfs1 nfs1,LOC107601922,LOC107559867 coding upstream 464845 23609253 ~ 23622118 (-)
LOC103042624 rbm39,LOC107655082,LOC107727761,LOC107602070 coding upstream 480502 23624910 ~ 23635826 (-)
LOC103041805 gem,rem1,LOC108411381,LOC107727768,LOC107655086,LOC107727184,LOC107685743,LOC107554936 coding upstream 503858 23648266 ~ 23660292 (-)
LOC111195460 NA non-coding downstream 3266 23098838 ~ 23100988 (-)
G192240 NA non-coding downstream 73184 23030652 ~ 23031070 (-)
G192232 NA non-coding downstream 141445 22961247 ~ 22962809 (-)
G192237 NA non-coding downstream 152928 22951007 ~ 22951326 (-)
G192235 NA non-coding downstream 165100 22938921 ~ 22939154 (-)
G192293 NA non-coding upstream 10174 23154582 ~ 23155042 (-)
G192335 NA non-coding upstream 71182 23215590 ~ 23223369 (-)
G192336 NA non-coding upstream 71768 23216176 ~ 23224603 (-)
G192365 NA non-coding upstream 184666 23329074 ~ 23329313 (-)
G192428 NA non-coding upstream 400127 23544535 ~ 23559176 (-)
G192251 adipor1,LOC107749488,LOC107385668 other downstream 45449 23054633 ~ 23058805 (-)
LOC103041653 phf20,LOC107655063,LOC107727854,LOC107561906 other downstream 300612 22786163 ~ 22803642 (-)
amhr2 NA other downstream 381349 22709549 ~ 22722905 (-)
alas1 alas1,LOC106583798 other downstream 741796 22349347 ~ 22362458 (-)
G191862 dusp7,LOC107561798,LOC107697567,LOC107677944 other downstream 1252612 21846969 ~ 21851642 (-)
cntn2 cntn2,LOC107727196,LOC107558367,LOC107727774,LOC107602860,LOC106565094 other upstream 894838 24039246 ~ 24105898 (-)
G192815 mdm4 other upstream 2067267 25211675 ~ 25217550 (-)
LOC111195415 tfeb other upstream 2730502 25874910 ~ 25878653 (-)
fam72a fam72a,zgc:101564,LOC108425783,LOC107590148,LOC107656018,LOC107548849,LOC107675824 other upstream 3566845 26711253 ~ 26724106 (-)
G193097 NA other upstream 3887255 27031663 ~ 27033089 (-)

Expression


Co-expression Network