LOC111195424


Basic Information

Item Value
gene id LOC111195424
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 28302568 ~ 28308048 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682757.1
TGGACCCTGCAACTTACCATCATCTGCAGTTCCATGATGGTATATGTAGCTGTAAAGTGCTAAAAGTATTGAATGCTGCAGCACCTGACGATCACTAACCTACATTGCAGGAGCTGGTTCTAGGGCACTGATCTCACAAAGCATGAACCAGATGGTGAAAAGATTACGGCACAACGTCAGAGGGACTTTGATCTAGGCATCATTCCTGAGAGCGAGACGGTGACATGTCATATTCGGGCATCACTCGATTTCTGTTTTTGCAGAGAGGTTACAGTGTATTTACAATTTGAAGAGTTCTGGAGCTGCCAAGGACTTTTGGAGCTGCTGCCAAATCTTCAGACATGGCTGCCTTCCGAAACTCCCAAAGCCCAACAGCTTGGCTCCTGGCTCTGGTGTTAGGATTGTCTCTGTTCCAGCAAGCTGCTGTTGCATTTGTCAGAACAGCAGGCAGCTCAGACTTAAAGATGCCCTTAGGTCAAACTAAGACTGGCCTGACCCCTGGCACCACGCAAGGCATTCAACAGGCTCCTGAAAGAGGAGTTGATGGGCTCTCCAAGGACTTGTTACTACTGCCTCTTCAGTTAAACACAGACGATGGTGATGGCTCTGGAAATGGAAGTTGGCTGAGAGAAAATCTCACAGAGGTAAACAGAGGTAGGGCACCATCTTCTGGAACAATGGAGAAGAACATCTCCGGTCTGGGTGGTAAAGAGAAACGAGATTTACGGGAAAGTGTAACAGACTCCCCTCCTCTCCTGGCTGGTCCACAAATACTCATGCAAAGGATTATCCGTAATGATAATCATGATGATCAGGATATAATGATGATGAATAGAAATGACCCCAGCGTTTCACAAGCCACGACCACGCTGCCTGTTCCGTCCACAGCACCAGCTCACAGCAAAGCAACCATGATTACAAACAACACTAAAAGCaatgtatttttaaccactaGAGTAGGACCAGCTATAGATAAAGAAATGACCCCCATTAGAACACTTGAAGAAACCCATGCTGTTGATGGTTCCTATGACATGGGAACTACTATCTCTGCAAAAACAATTGACAAAGAAGCCCCAGAGGAAAAACAGTTCATACATACAACAAGTTTCAACGCTGAAACAGAGGACTCAGGAAGTACATCCAGTTCTGGACTCAAGTCTATTGCTGACCAGTTACCAGATATGACCAGTGTATTCCGAGAACCACCTGAACCTCTACATGTGGAAAAAATGCAAGAGCAAGAGGCAATAGGAGTATTGCCTATGGACAAAACAACAATACAGAAAGGTAATAGGACATCTGGTGGTGCTGCCGCTGAGGCCCAGACACCTATAGGGTCATTGTCCTCAGTCAATCGATCAGAAGAATTAGATGGGCCGAAATCTAGAGATGATGACAAGTCTAGGTGGTTTGGTGGGATATTTGGGCCAATCACAGAGAAAGGCCTGTCTGAACCCTCAGGTCCTTGTGCTTTGGGTTTAGGCCCCTGTGTGTTTCCTACCAGCCCCAATGGCACTCTCCTGCAGTGGGAAGATTTGCGCCGCACTCTGGCATTTGCCTGGGAGCTCCATGTGTTTGGTTCTGCCATCTTCTTTATGTTGGTGGTAATCGGAGCCTTCTGGGGAGTAATTGGTGGATCTGGCATATGCCAACCCTTTTGTGAACCCCTCACTTTGGCAAATGTCCTGCTACTTCTCTCAGGTTTGCTCAGATTTGTTCAGTTCATTGTCGACCCGTATGGTACAAGGCACATCCTGCCCCGTCCAATCCTTGCAGCACTGTACAACTTACCGCTTGCCCTTCTGTTGTGGGCACAGGTCACCTTAGCTTTGCTGGCATTGAAAGGAACACGGTTGAACCTCCTGACTCCTGCTCTTCAGCGCCCCCATGTCACTGGAGGTCTAGCAACTTTGCACTGTGCTTCTCTTCTGGGGGCTGACCTTCTTTCCCACACCCTGTCCCCGGCACTACCCCTGATGCTTCAGACACTCTCCATCTGCTGGGGTCTTCCACTCTGTTTGGGAATTCTCTTCAGGGCCCTTCCTCCTCTTAGGTCGGCCGCCAGAACCCCTATCCCGAGATGGGGGGCCTACAAACGGGTTGAGGAACGTGCCAGGAGGGTTCTAATCGTCTGTGCCCTGCTGGGTGTCCTGTGCTGCACTCTTCAGATTCATGGCCTGCTCTGGATGTACGGGCTCCTTGGAGATTGGCGCCGGTTCGGCTGGGGCTGGTGGCTTGGGCAGTTCTGGGCACGCTTGCTGGAGCTGTCTTGGAGCTTCTCAATGCTGTTGCTGGGTTCAAGGGCCTTCTGGAGGCCTAGTAGAGGTGGGCCTAAGAGAGGAGATCGGGATCAAGGTCAAGGGGCTGGTGGACGATCTGAGAATGGCGCATTGGCTTCCTCTTGGGACAGAGTGTTGAAGTGCCTGCCTTGGAGAAGACAAGAAAATGCCTGGGCTGATCTGTTACCTAATAACTGGGCAGGGTACCAGCAATCCAGAACAGATATCAAGAATTCAGTGGTTGAGAACTATGAAGCCAATGCAAGTGTTGGTGTAAAGGACAGCCATGCTAACAGTACAAGTAACAGAGCTTATAGCACCAGCAACTATGACTCTCAGTCCGCTCCTCGGTGGTCTCATGGTCTAGAATGGCAAGAGCGTGACTGTGTCTTGTCTTTAATCGAGTTTGACTTATGCCCTCCCTCTCCCATCGAACTTAGACGAAGCATTGACAATGCCTTGCATTTTGGACACCTTTTAGGAAGCATGGGGAGCCTCTTTACCCCTCCACCTCCTTCCTGGACCCAGAGTGAGGTGTCCACAGCAGCTCCTGGAGGTGATTTTGCAACACAAACTACGCCCACCCACATAGCCTACAGGTGGGCTCTGGATGCAGAGTCATGCCCCATCTCTCCCCAGTGCTTTAGGTTGGCACAGGAACCTGAGGTGGCAGTGCTGGATCCAGAAACCTTCCTTCCTCCAGACATTACCAGTGAGATCCGGCTGTGGGAGAGAAATTCTGCAATACCAGCTGTTAAGGAAGAGGGTGACTGGATCAGCATAACAAGTGGTGACGATATCACTAACCTGTGAACCTTTTTTAGGCTAATTTATGCACAAATACAGACAGGACCTTTGTTCTGTGTTCATTTCATCCATATTTGTGCAAGGGCACAAACTAAGGTAAAAGCTAACAGATAAGGGCAGAGCACAACAGTACCACTGGAAACTGTGAGGGCAGTTTAGCCAGGAGTTCAAGTGAAACATGACCACTTCCATATGgacatgacaaaaaaatgaaGGCGGAACTTTTTCTAAACCCCCATTGcatcctttgtcttttttagaTATTAGTAAATTATCTCAACCTTTTACTCTATCGCCATGTTTGTTGTTGTCAGAAATGTTTGACTCTGAACTAGTGGAAGTGCTACTTAAAGTTCATGTCAATGTAAATCATTCATTGAAGAATGTGGGTAGTGGcgtttacattatttaaaatggaCCTTTAAGATATGTAATTTTTGTACGTAAAGGCAGTTTAAAAGAGAATTAAGACTTTAAGCTGTCTGTGGCACTTTAACTCGACagaatttgtttcttttatataGAAAGTATATAAATCATGCATGCAGTTCTGGTGTAACTGTACATGGTCTCAGTTCTAGGGAACAGTTTCATTTTACAAATGTACATACATTCATTTTATGaaagtaaaaatatgtataaacagCAC

Function

GO:

id name namespace
GO:0004059 aralkylamine N-acetyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682757.1 True 3738 mRNA 0.47 4 28302568 28308048

Neighbor

gene id symbol gene type direction distance location
LOC111195423 NA coding downstream 1560 28296305 ~ 28301008 (-)
LOC103025279 tmcc1b,LOC108436190,LOC107746889,LOC107755185,LOC107696833,LOC107656050 coding downstream 7600 28269957 ~ 28294968 (-)
LOC103044024 LOC108436218 coding downstream 34628 28253784 ~ 28267940 (-)
LOC103026411 LOC107680412,LOC107751023,LOC107555990,LOC107714481,LOC107699319 coding downstream 77904 28217461 ~ 28224664 (-)
LOC111195421 ddx19,LOC108411521,LOC108255077,LOC107680447,LOC107699345,LOC107572851,LOC107556002,LOC105931731 coding downstream 101346 28190720 ~ 28201222 (-)
LOC103024327 NA coding upstream 15307 28323355 ~ 28329288 (-)
LOC103043100 ncoa3,LOC108436109,LOC108255004,LOC107717960 coding upstream 151032 28459080 ~ 28507556 (-)
LOC103046446 LOC108436063,LOC107728611,LOC107656039,LOC107600301 coding upstream 238531 28546579 ~ 28570942 (-)
LOC103042433 taf4,LOC108436032 coding upstream 843673 29151721 ~ 29173495 (-)
LOC103040895 LOC108436021 coding upstream 869298 29177346 ~ 29219008 (-)
G193426 NA non-coding downstream 57866 28243808 ~ 28244702 (-)
G193424 NA non-coding downstream 66099 28235165 ~ 28236469 (-)
G193411 NA non-coding downstream 136487 28165841 ~ 28166081 (-)
G193386 NA non-coding downstream 234887 28067474 ~ 28067681 (-)
G193370 NA non-coding downstream 566457 27735902 ~ 27736111 (-)
G193435 qrich1,LOC107729405,LOC107558890 non-coding upstream 9296 28317344 ~ 28318704 (-)
G193477 NA non-coding upstream 87649 28395697 ~ 28469608 (-)
G193540 NA non-coding upstream 287603 28595651 ~ 28596007 (-)
G193568 NA non-coding upstream 567869 28875917 ~ 28930921 (-)
G193637 NA non-coding upstream 867866 29175914 ~ 29176124 (-)
LOC111195422 si:dkey-33m11.6,LOC108411515,LOC108255079,LOC107572850,LOC107714486,LOC107680422 other downstream 89498 28194379 ~ 28213070 (-)
tmem167b tmem167b other downstream 286956 28010991 ~ 28015612 (-)
LOC103046149 LOC102777140,LOC108436414,LOC102208887,LOC105027122,LOC108280970,LOC103144351,LOC107751002 other downstream 601237 27425042 ~ 27701331 (-)
LOC111195340 NA other downstream 910997 27390794 ~ 27391571 (-)
G193097 NA other downstream 1269479 27031663 ~ 27033089 (-)
LOC111195343 LOC108434908 other upstream 268059 28576107 ~ 28586222 (-)
G193541 NA other upstream 289507 28597555 ~ 28598638 (-)
G193737 NA other upstream 1857713 30165761 ~ 30180126 (-)
spcs1 spcs1,LOC107680421,LOC107744856 other upstream 2501746 30809794 ~ 30830957 (-)
LOC103037496 mustn1,LOC103037496,LOC103359875,LOC107091502 other upstream 2862250 31170298 ~ 31194049 (-)

Expression


Co-expression Network