fam120a (fam120a,LOC107685640,LOC107691381)


Basic Information

Item Value
gene id fam120a
gene name fam120a,LOC107685640,LOC107691381
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 16796868 ~ 16827437 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682837.1
aaacgcACTGAATCATCATGGGGGTCCAAGGTTTTCCAGGAGTACATCGAGAAGCACTGCCCGAGCGCCGTGGTGCCGGTGGAGCTGCAGAAGCTGGCCCGGGGGAGTCTGGTCGGCGGCGGCAGGCAGAGGCCGCCCCAGTCGCCGCTCCGGCTGCTGGTGGACGCGGAGAACTGCCTGCACCGGCTGTACGGCGGCTTCTACACGGACTGGGTCAGCGGCGGGCAGTGGAACCACATGCTGGGCTACCTGGCCGCCCTGGCTAAAGCCTGCTTCACCGGCAACATCGAGCTGCTGGTCTGCTTTAACGGAGCCCTGGAGAAAGGCCGCCTGCACGAGTGGGTCAAGCGGCAGGTGAACGAGCGGCAGACCGCCCAGCAGATCATCAGCCACGTCCAGAACCGCGGAACCCCGCCGCCCAAGGTCTGGTTCCTGCCCCCGGTCTGCATGGCCCACTGCATCCGCCTGGCGCTGCTCAGATTCCGGATAGGAGTTGTGCAGAGTATCGAGGATCATCACCAGGAAGTGATCGCCTTATGTAGAGAGAACGGCTTCCACGGATTGGTGGCGTACGACTCCGACTACGCCCTGTGCAACATCCCGTACTACTTCAGCGCCCACGCCCTGAAACTCAGCCGCAACGGCAAGAGCCTCACCACCAGCCAGTACCTGATGCACGAAGTCGCCAAGCAGCTCGACCTCAATCCAAACCGCTTCGTCATCTTCGCCTCGCTGTTAGGGAATCACATTTTGCCTGATGAGGATCTCGCGGCCTTTCACTGGAGTTCACTCGGCCCAGAGCATCCTTTAGCGTCTCTGAAGGTTCGTGCTCACCAGCTCGTGCTTCCTCCGTGCGACGTCGTGATCAGGGCTGTGGCGGATTACGTCCGTAACCTGCCGGACATCAACGACCTGGAAGCTATCGCTAAAGATATATTCAAACACTCCCAGTCCAGAACTGATGAAAAACTGGGGCGTTTTAAGAAAGCAGTGGAGTATTACTCAGCCGCCAGCAGACCCCTCCAGCCCTCTCCTTATTCAGTCAGACCAAAGCGGCTCGGGGTTCCTGGAGCTGCACCACACTACATCCACACGCCTCCGCAGATACTGAACATTCCTCAGCCCGCCATCCAGCTGCAGTCTGGGGTCCAGCAGCAGAACTCCTCTGGAGCAGATCCAGCAACTAAAGGGCTTTCTGATCAGAACAGCTTCAGCAACATTCCTCACGAAGGTAAACCTCACACTCCGCTGTACGAGAGAGCGTCGCCCATCAACCCCGCCAACCCGGGCAGCCCCAACCACACTGATCCAGCCTTCTTCAacacctcctcctcatcctcctcctcctcagagaACGAGGAGAACACCGGTCCTACTGCCAATCATATATGTGACCACAAGGGATGGGACAAACGGAGAAATCAGATGGACAGCATCGCAGAAGGAGATGCAGGGGACCAAAATAAATCTGAGTCTGCTGTAGCGTCTGTGGGTCCGGGTCTCCACGGGCTCAACGCTCAGATCCCGTCCCTGCTGTCGATGCCGACCAGGAACCACATGGACATCACCACGCCTGCGCTGCCCCCGGTGGCTCCAGAGGTCCTGCGGGTCGCCGAGCACCGGCACAAGAAGGGCCTGATGTACCCTTACATTTACCACGTCCTCACCAAGGGTGAGATAAAGTTATGGGTCACTATTGAAGACGAGGCTAATAAGGAGCTGCCGGCGGCGGTGCAGCTGTACCGGCCGATCCGACAGTACGTTTACGGGGTTCTGTTCAGTCTGGCCGAAGCCAAGAGGAGAGCGGAGAGACTCGCCATGAGGAGGAATCGCCTGCCTGAGTTTCAGCCTGTAATAATAAAGGAGTGGGCGGCGTATAAGGGGAAATCTCCTCACACTCCAGAGCTGGTGGAGGCTCTGCCGTTTAGAGAGTGGACCTGCCCCAACCTGAAGAAGCTCTGGCTGGGTAAAGCCGTGGAGGACAAGAACCGGCGCATGAGGGCCTTCCTGGCCTGCATGAGGTCCGATACCCCCGCCATGCTGAACCCTGCCAACGTGCCAACCACGCTCATGGTGCTCTGCTGCGTCCTGCGGTTTATGTTACAGTGGCCAGGAGTAAGAATTTTGCGTCGTAATGAACTTGACGCTTTCCTAGCTCAAGCACTTTCTCCTAAACTTTATGAGCCCGACCAGCTGCAGGAACTGAAGATTGATAATCTGGACCCTCGTGGAGTTCAGCTGGCGGCTCTGTTCATGAGCGGGGTGGACATGGCGCTGTTCGCTAACGACGTGTGCGGTCAGCCCATTCCCTGGGAGCACTGCTGCCCCTGGATGTATTTTGACGGGAAGCTGCTGCAGAGTAAACTGATCCGAGCCACTCGAGACAAAGCACCGCTCATCGACCTCTGTGACGGTCAGAGCGAGCAGGTGGCTAAAGTGGAGAAGATGCGGCAGAGTATCCTGGAGGGTTTGAACTTCTCTCGGCCTCCTCACCCCCTCCCCTTCCCCCCACCCCCCCATGCCATGCCCTTCTACCCCCCCAGCAACCCCTTCTACCCCCCTCCACCCTTACCCCCTCCGCCCGGCCGGGGCAGAGCCATGCCTGGACTTCAGCACATCCCGTCTCACGGTGGGAAGCTGGAGATAGCCGGTACTGTGGTGGGTCAGTGGGCGGGGGCTCGGCGAggcagggggcggggctccTTCCCCATTCAGGTGGTGTCAGTCGGAGGACCAACCAGAGGACGACCAAGAGGCGTGATCTCAACTCCTGTTATCAGGACTTTTGGTCGAGGAGCCAAATTTTACGGGAGAGGTTTCAAGAGTCAGGTATCGTACCAGagTAAGCCAGCGTACACTGGGTCTGCCGGCGAGGCGGCGAAAGACCGGAAGAAGCCGAAGGTGGAGAGCAAAGCGTCTCCGGAGGCTCCGGCAGCGGCGGAGAACGGGCTGGAGGTCGGGGAGGCGGAGCAAGTGAACGGGAACAAAGTGGACGTCAGGGGTTCCCACCAACCGGAAAGTGCCTTTAGCAACGACTCCAAAATGTGCAATATTAATCCTCACTTAAATGCACTAAACTCGGCCGGCGAGCGGCGCAGAGACGACGCCGTGAGCGCCAACGCCAACGCCGCCGCTGTCTTACAAACAGAAGAGTAGAGCTATTTTTATAGAGAGGGTGAAGGATGCTGGAAGGGTTCAGGGTTTTTGAGGAGAGTCTGGATGGAAAGATGGAAAGCGTAGAGTTGGTGAACGTTTTTTCCTCTccgaaatataaaaataaaaaaaagcagagaaaagcTTAAAAAGCTTAACTAACTTGATGATAAACTTGAGGACTTTTACTGTATGAAATTTTCAGAAATTCCTCTTTCGACGTCAGCGAGTTAAAACCTGCGAGTAACGACGACATTTCTCAGCGCGAACGCAACACACACTCAACTCAACACgataaagagatttaaaaacGACGTTTCTTagagaaaaataattataataacaccaGTATATAAGGAGTTATAATATGGGTCTGCTCCCTCCTCActgatgatatacagtataataataatatattaattaatatacactatattggcAAATATATTCACTCGCTCACCTGCATTGCAAGGTTTGGATGAATTTGAGCCGATCGGTCATGTAAACCTCTCTTTATTCCATTACTGTTGTTCTAATCTGAAGATACacgaagtttggaggtctgtaatGTTGTAAACCAGGAAGGGTCCATCCCCAAACTGTTCCCACAAAGATAAAGGCATGAAAAtgtccaaaatctcttggtTTGCTGAAGCATTAAATGCTTCTTCACTGAAACTAAAAAGGCTCGAGCTCAACtcctaaaaacaacaaaaaaaacaccaccaccaccacaccatAATACTAATGATCCCCCCTCATCCAAACTTTTACACCTAGCACAATGCACCACTGCTGTCATTTCGATTTAAGATGATCGGTCATGTAAACCTCTCTCCATTCCATGAGTCTCTCTACACTGTTCTGTACTGTTATTTACTCCACACCATACTAATGATCCCCCCTCATCCAAACTTTACACTCAGCACAATACAGCCAGACAAGTACTGTTCTCTTTACAAAACTGCTGTCATTCCCAggctcttccactgtgttataatatcactgacagttggctgtggaatatttagtagtgagtagtagtGGGTAAATTTCACAACTGGACTTTTTGTTGCATGACTGGGTGCTGCATCCTACCCATCacggtaccacagtgctggagttcactgagctcctgagagcctgagacccatCCTTTTACTAATAGactgtttgtagaagcagtcccagcatgccttgctgctgctttttatgttttattaaacacctgTGGACACGTAAGTGATTGGATTGAACACCTGAGTGAATATATgtttggcaatatagtgcatatatatataaaaatagacatttttgaTTTTACAGAACAGAATCTTCGTTCAGTAACTTCAGTAACTTTATAggttgagatatatatatatgaataaatatatatatttgcgcCATTATAATTGAATTTGTGTTGTGTCAGTAAATAtacagcttttattttgaaatttagTTTGTTTAAGGTGAGCAAAActcatgacaaaaaaaacaagaaggagCAAAATGATAAATTCACTGTGGGTGGTTTAGtcgtgctttaaaaaaaataaaatgacgtAAATATACGTAAATATACTTGCAGCTTTAGGTTCTCTCCGTTTGATCGGTGTCATACTTTAGCAGTGTAAGAAACATCGAGACATCAAGCAAGAAGCGAAAATCGATTCATTTCTATCTGATCAATAGAAAATTAATGAACGTTTTCGTCAGAAACCGCCACGTGACTTATCGATTTATCCGTATCCGTGTGGTTTCTTGAATCAGTCGtagaacattattattaaagaacATGAATAAAACGACGGTTTCAGCAACTTTCAGCAACTCTGCATGATTCTCTTCACGATGAAAATCGagcaaaaatcaaaaatcaaaaaaaggtgtgtagttattattattattattattattacgatGCATGTTGTCCTTTTTCTTTCCATCTCTACAAGTAAGTACTGTGCCCATTTGCAAAATCTTTGAAACATGGCTAATAATCAGTAATAATAGTCCTTATTAAAGGTGTTCTAACTGTTAGTCAGTAACTGATTTGCTCTAACCTTTTGAAATTCTTGTGATTTATCGACCTCTGTTGCATTTTACTCAGAAAAACTCTGGATTAataataagagaaaataaagagaatataTCAGATGTTATCTAGccactttaaatattgttaacCCTGGTGTACTACTCTTCCATCTCCATCCCTGTATCTGTTCTTGCCCtttgttgctgctgtttttgtGCATCTTCATAATTATCGcatataaaaaagaagaaaagaaaacgcTTTGATCTGTTTGAATGCCACGcccccttttttatttattttatttatacaaagcCTGAGACAAAAGGAACACGTTTTTGACTTTTCCCAAAGTCCCAAAACTCTTTAcgcatttctttcttttcaattttaaatgCTAAGAGACAaaaattcatattttacatCATATTTTACATCATAATTGATCAAATCTGATTCTACATCATccaaatttatataatttaattaaaaaatgcttaaacaaacaaacaatcaaaaacAAACGCGattttcctgcttttgttttgGCTGCTGCGCCTGCGCAGGTCTCCACAgcaagcagcaagctgattggctctttttgctTAAAATGCAAAAAGACTTCATCCATAAATgttgatattaatattagtaataagAGTTCAGAGAAATCCCATTTTTACACAGAAGTAATTTTCCTCAGTCTCCTCGTTAATAAGGTCTCTATGCCCGTACGTTCTAGAGTTTAGCGTTAATAAGCACAGGTTAAGAACTTCGTAATCGTTTTTTTCGGTGTTTTGCGTTTTCGTGTTTTTTTCCCGGAGCTGCTTCTACTTCTGATTGAGAATCATTACTTACAAAAGTTTTCCATCTAATCCTCCTGATTAAGCTTTTCGTCGCACATTAGTGATCAGAAATATGGTGTACTATCCCCCCGACCGCCAGACTAAATAGGTTACCTTAATGTAAGTTGATGGGAGTTGTTTCCTAACTCACAGGGTGAAGCGGATCGATCTACTGTGGGGTTTTGAGTGACTGTGAATGGATTGTGGTGTGATGTATTAGAAGGAAATTGAATGCAACTTACAATGCTTAATAAAAGTCTTTATTCTTTTAGTATAA

Function

symbol description
fam120a Orthologous to human FAM120A (family with sequence similarity 120A).

NR:

description
PREDICTED: constitutive coactivator of PPAR-gamma-like protein 1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682837.1 True 6316 mRNA 0.47 18 16796868 16827437

Neighbor

gene id symbol gene type direction distance location
phf2 phf2 coding downstream 2638 16739287 ~ 16794230 (-)
wnt7a wnt7a,wnt7aa,LOC108424657,LOC107749431,LOC107685644,LOC107727836 coding downstream 240110 16520544 ~ 16556758 (-)
LOC103029523 iqsec1b,iqsec1,LOC108424663,LOC107691341,LOC107551128 coding downstream 658575 15869135 ~ 16138293 (-)
LOC103030277 LOC108415871 coding downstream 945677 15846861 ~ 15851191 (-)
LOC103047460 NA coding downstream 963147 15832088 ~ 15833721 (-)
cstf1 cstf1 coding upstream 47971 16875408 ~ 16884596 (-)
LOC103036783 NA coding upstream 59274 16886711 ~ 16954694 (-)
LOC103037092 ece1,LOC107727859,LOC107691323,LOC108255065,LOC107749422,LOC106582992 coding upstream 138779 16966216 ~ 17007699 (-)
strip1 strip1,LOC106565664 coding upstream 283234 17110671 ~ 17123621 (-)
LOC103038379 LOC107662820,LOC103362894 coding upstream 303904 17131341 ~ 17158655 (-)
G190444 NA non-coding downstream 3281 16792880 ~ 16793587 (-)
G190434 NA non-coding downstream 48481 16691829 ~ 16748387 (-)
G190435 NA non-coding downstream 74208 16705878 ~ 16722660 (-)
G190433 NA non-coding downstream 110246 16686156 ~ 16686622 (-)
G190430 NA non-coding downstream 138374 16658221 ~ 16658494 (-)
G190449 NA non-coding upstream 10186 16837623 ~ 16944365 (-)
G190453 NA non-coding upstream 85557 16912994 ~ 16953947 (-)
G190750 NA non-coding upstream 129724 16957161 ~ 16958432 (-)
G190751 NA non-coding upstream 131297 16958734 ~ 16959355 (-)
LOC111195388 NA non-coding upstream 136458 16963895 ~ 16966069 (-)
ptpdc1 NA other downstream 197551 16569623 ~ 16599317 (-)
G190405 fbln2,LOC108424659,LOC107727849,LOC107691338 other downstream 335940 16345701 ~ 16460928 (-)
LOC103026676 LOC108424672,LOC108254855,LOC107691347,LOC107749448,LOC107685659,LOC107551122,LOC106582641 other downstream 1330284 15409207 ~ 15466584 (-)
LOC103024926 dynlrb1,LOC106565026 other downstream 1474693 15318643 ~ 15322175 (-)
tsen2 NA other downstream 3720126 13062799 ~ 13076742 (-)
cass4 NA other upstream 6413 16833850 ~ 16869461 (-)
irf6 irf6,LOC107599105,LOC106565674 other upstream 353677 17181114 ~ 17193747 (-)
G190788 NA other upstream 389884 17217321 ~ 17219780 (-)
mrpl20 mrpl20 other upstream 1311926 18139363 ~ 18213530 (-)
LOC111195395 NA other upstream 1339803 18167240 ~ 18176164 (-)

Expression


Co-expression Network