LOC103036783


Basic Information

Item Value
gene id LOC103036783
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 16886711 ~ 16954694 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022682838.1
CCGCTCAATACGCTCTGTGGCCGCACCCAGCTTTCTAAACCGAGCCGAGCGCTTCCGAAGCGGCGCCGAGGTGTCCCGAACCGTCCCGTCCTGCTGGACTCGGCTTCAGGCGGCCCGCAAAGCGCCATGTTGAGCTAACGTTAAATCTGCGACCTTAAATGATAGAAAAGCGAGCGGGAATATCGGGATTACGGAGCTCAGGAGCGGGATGCCGGCAGGAGCTCGCGTGTGAAGCGGGCCTGGAGACGCGCCGGACCGGTACCGGGACTGCTATCTGCGGAGGTTCGGGGTGGAGACGGGAGGAGAGGCGCCCTGATGAAGAGCCTACAGCCCGGAGAACACAGAGCCCCGTCCGCCCCCAGAAATGCCTTTTTACCCCAAAAAACGCAGCGCGCCTGAGCGAAGCCGTGCTGAGGGAAGCGCCGAGTAGCCGAGCTGCGGGATTTTCTCCTTATTTTTGTCGGATTTTTGCCTGTTTGAGATGAGTTTAGCACCTAAAGGGGTGCCGAAACCCACCGGCGGAGTTACGGTTGGTGGAGCCGTGGCAGGGCCGCCGCCGGCCGGCCAGCTGAGGGCGAGTCTGCCGCCGGTTCCTCTTCCTCCTGGAGCTCAGAGCGCCGCGCAGCCTCCCGCAGCGGTACCCCCGCCTCAAATCCCCCGCGTGCCGCTGTCACTGGAGGAGCGGATATTTCCAGCCCAGCCGGGGGTGACTGCGGTCTACAGCgtTCCTCGGCACCCGGGTCCTCCATATCCAGGCCATGATCTGAGTAAAGCCCATCCTAACCTGGGAGGAGCTCCACCCACCTGAtcttttttcagaaaaaaaatttcctcccccccccccccacccaccgcCGCCCCGTACCGCTATATAAAGGGCTGGGAAACAGGTGGAGGGcCTTCCTACAGCCAGACACAGAACGCCTCTCCACCCCTCGTTTATTCTCCACAGACTCAACCAATGAACATACAGCCTCCCAGCAGACCATTTGTGACCGGGCCCCGACCCGCCCACCACCAGtTTCTACACAGGGCTCAGATGCAGACCACTCGTCCTGCTCTCCCCACGAACGCTCCCTCCATCCGAGCCagctctcagactccggctgctgccGTCTACCCTCCCAATCAGACCATCATGATGACCATGACCCCCATGCCCTTCCCCTCCCCACAGGCAGCCCAGTACTACATCCCACAGTACCGTCACAGCGCCCCCTATGTTGGACCCCCGCAGCAGTACTCTGTGCCGCCACCCGGCTCCGGAACCTTCTACTCCGGACCTGGACCCGGGGAATACCCCACACCATACGctgcagcagctgcaggTCCGGCGTATTTTCCGGGTCAGACGGTGTTCCCCTCCTCCGCCCCCATCATAGTGCCTAcagtccagcagcagcagcagcagcagcagcctccacCCGCCAAGCGCGAGAAAAAGCCAATCCGGATCCGGGATCCCAACCAGGGTGGAAAGGACATCACGGAGGAGATCATGTCCGGGAGCAGGAATCCCACCCCCCCTATGGGCCGCACCTACTCCACCCCCACACCTCCTCAGcagCGGAGCGCCAGTCAGACTCCAGAGCAGATATCCTACAGCATGGATCCACCCTACAGACTCAGCCCTGTGTCTATAGACATCAAACCTGCCTCAGaGGAAAAGCCTAGAACGGACTCCGGCCCCCGTAAAGCATCGTCTCCTGAACTCAGGCCTTCAGATTCCTCTACAGACAGAAGGGAAGCTTCCAGTCTTCCGTTATcagactcctcctcctccccctctctcctgGAACCAGAGATCTCCCTCTCTGCATCTCCCCCCAgcctccctcttcctcttcctctcagcACCTGTAAGCCCACAGCCGCAGGAGAACCTGAGGAGCATCTCCCGGCGGTTCCTGCGGTTCCTGCGCTTTTAGCTCAAACTCAAACACCGGATACAGAAATCTCTCCTCCAGAAGCTTCTCCCAGTCCGTCCGCCTCCCCCTCGCCTCCTCCCAAAGCCGTTAACGGTTTATCCGAGTCTCCGGCTCCGTCTCCCTGCGGCGAATCAGATTTTCAATCTCAGGAGATCCTTCCTGCTCCTCTCCCCAACCATCTCCTCTCAGCGCTGAGCCCGGTTCTGCTGGATCCTCCTCAGAACGAAGCGCAGGTTTTAAGAGAGCATCTCCTCCAGACAGAGGGTCATCAGCCTTCTTCAGCACTCGACTCCGGTTCCCAGCCTTCATCCACCTCCTCGAGCATCAGCGTGACTCCTCTAGCGCCCCCTCCTGGACTCTCCATGGTGCTTCTGCCGACTTCCAGCGAAAGCGATGAAATTAACAGAAGCACAGACTCAAacatcctgctgaaaaatgaagcTGCACTGCAGGAGACCCACGCTAACGTCTACCCAGATGCACAGAGTGCACAAACTAACTCCAGAAAGATGATGCCAACAGCACAAGCTGCTTCTGTTGCACCAAAGGGCTGGAAAAGACCAAATGAAGAGTGTGTGGATGTGGAGCCTCTTCACAAGGAgaaggagGAGGCGGTCAGTAAGGACGAGTCTTCTCGGGACGAGACGTCTGGACAGGAGAGCAGGAACGGTTCAGCTCCAGCTGAGGAAGTGCAGGAGAACCTGGCGGTTCTGGAGGAGAACGGAGAACCTGATCCGGAGCCACTGCGTAACGGAGCCGGACACGCGTCAGAGACGGAGAGTGTGGACAGTGGGAGCACTGAGGACAAGAAGACCTCTACAGGAACTCCACTAATCATCCAGGAGGAGTCTGAGCCGCCCAATGGTAAGAAGCAGTATGACCGGGAGTTCCTGCTGGGGTTCCAGTTCATGCCGGCGTGTGTGCAGAAACCAGAGGGCCTTCCTCCAATCAGTGACGTCGTTCTGGACAAGattaatcAGACTAAAGTCCCGCTGATCCGGATGGTGGATCCCCGGCTGATGATCCGAGGGCCCGACTTCACCCCAGCGTTCGCTGACTTCACCCGCCAGTTACCCGGGATGAGAGGACCACCCCTGCTCAGTCTCGGAGCTCGTCGGCCGCCGCCGCGTAAAATCATAATGAACGTCTCTGTGAACGACGATGTTCAGCTGAAGAAAGCAGAAAACGCCTGGAAACCCGGCATGAAGAGAGAAGCTGCTACTGAAGACCAGGAGACCCAGAAAACACAgGATGTTCTGAAGAAGGTCCGCAGCATCCTGAATAAGCTGACGCCGCAGATGTTCACGTCCCTGATGAAGCAGGTGACAGATCTCACCATAAACACAGAGGAGCGTCTGAAAGGAGTGATAGATCTGGTGTTTGAGAAAGCCATCGACGAGCCCAGCTTCTCTGTGGCCTACGCCAACATGTGCCACTGCCTGGCTACGCTGAAAGTACCCATGGCGGATAAACCCGGCACCACCGTGAACTTCAGGAAGCTCCTCCTGAACCGCTGCCAGAAGGAGTTTGAGAGAGATAAAATGGACGATGCTGCTTTTGAGAAGAAGCAGAAGGAGCTTGACTCTGCATCATCGGTGACTGAGAAGGAGCGTCTGCAGGAGGAGTTGGAGGAGGCGAAGGATAAAGCTCGCCGTCGCTCCACAGGAAACATCAAGTTCATCGGGGAGCTGTTTAAGCTGCGGATGCTGACCGAGCCCATCATGCACGACTGTGTGGTGAAGCTGCTGAAGAACCACGACGACGAGAGTCTGGAGTGCCTCTGCCGCCTCCTCACCACCATCGGCAAAGACCTGGACTTCGAGAAGGCCAAGCCTCGTATGGACCAGTACTTCCACCAGATGGAGAAAATCGTCAAGGAGCGAAAAACCTCATCACGGATCCGCTTCATGCTGCAGGACGTGATAGACCTCAGACtgCATAACTGGGTCTCCCGCAGGGCTGAACAGGGACCCAAGACCATCGAGCAGATCCATAAAGAGGCGAAGATTGAAGAGCAGGAGGAGCAGAGGAAAGTCCATCAGCAGCTTCTGTCCAAGGATAAGAGACGACCAGAACCGAGGGAGTTACGAGGTTCTGTCAGAGAGGAGACCTGGAATACGGTACCGGTCACCAAAAACAGCAGAACCATCGACCCCTCCAAAATCCCCAAAATCTCCAAGcCTCAGATGGATGATAAGATCCAGTTGGGGCCGGCGAGAGCTCAGCTGAACTGGATGAAGGGCAGCAGTGGAGGAGCTAAAGCCAGCGATTCTGAACTCTCCCGCAGTGGTAACAGTAGTCTGAACCGGTATTCAGCTCTGCAGTCGTCCGCAGCTCAGTCACCGTTACCACCAACACAGAACCCTGAACCCGACAACAGACGACCTCTAGCCAGtCGAGGCAGCAGTAGTCGGGGTGAGAAGGTGTTGAGTTCGGTCCCCTCGCGGCCCCTGGGTCGTGGCAGCAGCAATAAGGAGCTTCTGGAAGCTGTGGCCCCTGAAGAGCCACGCAGAGAAAACACCCCCCCTCGCAAAACCAGCGTCTCCGAGGAGCGCAGCGACACACAGCTCAGCAAACCCAGAGAACCCTCAGTAAAAAGGGAAAGTCCAGTAACGGTGGTTCCAGCTAAACCTGCTGTATCTGAGGAGGAAATGGAGAGAAAATCAAAGTCAATCATCGATGAGTTCTTACACATCACTGACTAtaaggtgctgctgctgctctgtggggtgtgtgtggagtcCACGCTGGAGCGCAGTCAGATCTCCAGAGAGCACATGGGTCACCTCCTATACCAACTCACCCAGCAGAGCATCCTCCCCCGAACACAGCTATACACaggGTTTGCTGATACTCTGGAGATGGCTGATGATATGGCCATAGATATTCCTCACATCTGGCTGTACCTGGCTGAGCTGCTGTGTCCTCTGCTTAAAGAAGGAGGAATCCCCATGAGAGAACTTTTCAGTGAACTAAGTAAACCGTTACTCCCAGTGGGAAGAGCCGGTGTGTTGTTATCAGAAATACTGCATCTACTATGCAAGCAAGTGAGCCATAGGAAAGTAGGAGCTTTATGGAGAGAATCTGGTCTGAACTGGAGCGATTTCTTGTCAGAAGATGAGGATCTCCAAAGCTTCATCTCAGAGCAGAAGCTTCAGTTCACTCAGTCCGACTCTTCCTCCAGTCCTTCATCTCCCTCCAAACCCAGCCTGCCTCCAGAGGAGCTTCACACACAGCTGGAGAACCTCCTGCTGGTGGACATGGCCACTGATGAGCAGATCTTTGACTGGGTGGAGGCGAATTTAGATGAATCTCAGATCAGCTCCTCTCTGTTTCTGAGAGCTTTAATGACGGCGGTGTGTAAGGCTGCAGTTAAAGATGAGAATACGTCCTGCAGAGTGGACACGGCCATCATCCAGAAGCGTCTGCCGGTTCTGCACAAGTACTTTAACGCAGATACTGAGCGGCAGCTGCAGGCGCTGTACGCTCTCCAAGCATTAATAGTGACCCTGGATCAACCACCCAATCTGCTGCGGATGTTCTTCGACTGCCTCTACGACGAGGACGTGATTTCagaggatgctttctacaggtGGGAGACGAGTAAAGACCCGGCGGAGCAGCAGGGGAAGGGCATAGCGCTAAAATCCGTCACCGCCTTCTTCACCTGGTTACGGGAGGCGGAGGAGGAGTCGGAGGATAATTGACGAGGGGAGGCGGCGGCCGCCTGCGTGAGGCCCCGAGgcacgctgctgctgctcatcATAAACTCACAATAAGAATAAATCTTCGTAAAAAAAAGTCTTCGTAACTCGTAACCGACTCTAGAGTCGTCCTCCTCCCCCTGGTGGCGAGACACAGGCGCTGCGGCGGCAGATTTCTGCGGTACGGCTTTGGATCGCTCCGGTTTATCGTGTTCGAGTTCCTTCGCTGAGAGGGACGGGCCAGTACAGCCCCTTGTATCATATATAGAAaatattctttttgtttttctgattttaaatgtaattgtttttttttttttgctccttttgttacttttaaagaaaaagaaaagactttACGAAATAGGTTCTGAaatcaataatttattatttttttaaaacaaggccacaaataaaaaaaataaaaaaacacacggAAGTCTATTTAACATTTGCAGGTGCTCACCGTCGAGGAAGTCACTGATAATAGAAATAACAGATTAAATATCTTCATGATATTATAACAGTAATAGTTATTAAGGAATGTGTCATTTTGGCCTGCCCGAGATTTCCGTGTCGTTGCAGAtgtttctgaaatgtttttctCTGGTTCTTCAGATGTTCATTTTCTCAGGTTCTCTTGAGTTACACCAGAAACTGCTCCTCATcaatttttgtttgatttcaaTTCGTCTCCAACTAAAGTAATGCATCCGAGAAGAAATGCTGAAGATTTAAGACTCAACATGACGAgaacaaacactaaaataaatgcatttgagAGATGAACGAACCACACACTACTAATGCAAGTCAAAAACAGGGCCAGGGCTGCTCTGTCTGCTTGTGTACAAAAATTAAAGACCTATagagaaaatgtaaaacttgtaaatatattaaagatattcaaaaaagaaaaa

Function

GO: NA

KEGG:

id description
K03260 EIF4G; translation initiation factor 4G

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022682838.1 True 6552 mRNA 0.54 35 16886711 16954694

Neighbor

gene id symbol gene type direction distance location
cstf1 cstf1 coding downstream 2115 16875408 ~ 16884596 (-)
fam120a fam120a,LOC107685640,LOC107691381 coding downstream 59274 16796868 ~ 16827437 (-)
phf2 phf2 coding downstream 92481 16739287 ~ 16794230 (-)
wnt7a wnt7a,wnt7aa,LOC108424657,LOC107749431,LOC107685644,LOC107727836 coding downstream 329953 16520544 ~ 16556758 (-)
LOC103029523 iqsec1b,iqsec1,LOC108424663,LOC107691341,LOC107551128 coding downstream 748418 15869135 ~ 16138293 (-)
LOC103037092 ece1,LOC107727859,LOC107691323,LOC108255065,LOC107749422,LOC106582992 coding upstream 11522 16966216 ~ 17007699 (-)
strip1 strip1,LOC106565664 coding upstream 155977 17110671 ~ 17123621 (-)
LOC103038379 LOC107662820,LOC103362894 coding upstream 176647 17131341 ~ 17158655 (-)
LOC111195389 NA coding upstream 208122 17162816 ~ 17178813 (-)
wdr77 wdr77 coding upstream 270984 17225678 ~ 17234938 (-)
G190446 NA non-coding downstream 67101 16818801 ~ 16819610 (-)
G190444 NA non-coding downstream 93124 16792880 ~ 16793587 (-)
G190434 NA non-coding downstream 138324 16691829 ~ 16748387 (-)
G190435 NA non-coding downstream 164051 16705878 ~ 16722660 (-)
G190433 NA non-coding downstream 200089 16686156 ~ 16686622 (-)
G190750 NA non-coding upstream 2467 16957161 ~ 16958432 (-)
G190751 NA non-coding upstream 4040 16958734 ~ 16959355 (-)
LOC111195388 NA non-coding upstream 9201 16963895 ~ 16966069 (-)
G190754 NA non-coding upstream 38654 16993348 ~ 17044008 (-)
G190756 NA non-coding upstream 44885 16999579 ~ 17020436 (-)
cass4 NA other downstream 17250 16833850 ~ 16869461 (-)
ptpdc1 NA other downstream 287394 16569623 ~ 16599317 (-)
G190405 fbln2,LOC108424659,LOC107727849,LOC107691338 other downstream 425783 16345701 ~ 16460928 (-)
LOC103026676 LOC108424672,LOC108254855,LOC107691347,LOC107749448,LOC107685659,LOC107551122,LOC106582641 other downstream 1420127 15409207 ~ 15466584 (-)
LOC103024926 dynlrb1,LOC106565026 other downstream 1564536 15318643 ~ 15322175 (-)
irf6 irf6,LOC107599105,LOC106565674 other upstream 226420 17181114 ~ 17193747 (-)
G190788 NA other upstream 262627 17217321 ~ 17219780 (-)
mrpl20 mrpl20 other upstream 1184669 18139363 ~ 18213530 (-)
LOC111195395 NA other upstream 1212546 18167240 ~ 18176164 (-)
LOC103041510 LOC108414096 other upstream 1356758 18311452 ~ 18315337 (-)

Expression


Co-expression Network