LOC111195373


Basic Information

Item Value
gene id LOC111195373
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 10177130 ~ 10180602 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002651602.1
ctaaacaagtaactGTTGCCGCTGGTGCCCCTAAAGGAGTAGCTAATTTCACGTGTCGGACAATAGAGTCTCCTATCACCAGAGTACCTTTAACAGGCTCCTCAGTTGGTGCTTCACTGAGCGGGGCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002651602.1 True 130 ncRNA 0.49 3 10177130 10180602

Neighbor

gene id symbol gene type direction distance location
LOC103039471 NA coding upstream 44421 10120033 ~ 10132709 (+)
dhrs3 dhrs3,LOC108439496,LOC107555693,LOC107685629,LOC107749419,LOC107703071,LOC103042050,LOC106582983 coding upstream 135989 10023992 ~ 10041141 (+)
klhdc7a LOC108438577 coding upstream 337808 9836099 ~ 9839322 (+)
LOC103024232 arhgef10la,LOC108438575,LOC107695083,LOC106565901 coding upstream 1444005 8438713 ~ 8733125 (+)
LOC103046266 chd5,LOC107555845,LOC107691315 coding upstream 1746068 8346072 ~ 8431062 (+)
LOC111195374 NA coding downstream 33757 10214359 ~ 10214948 (+)
LOC111195375 NA coding downstream 39940 10220542 ~ 10221130 (+)
LOC103026179 asic1,asic1b,LOC107721241 coding downstream 295337 10475939 ~ 10963809 (+)
LOC103041410 asic1b,LOC107569540 coding downstream 557452 10738054 ~ 10739675 (+)
slc25a26 slc25a26,LOC107753336,LOC107699790,LOC107753784,LOC107600283,LOC107656062 coding downstream 816737 10997339 ~ 11070355 (+)
G188478 NA non-coding upstream 19674 10091209 ~ 10157456 (+)
G188366 NA non-coding upstream 110707 10065738 ~ 10066423 (+)
G188349 NA non-coding upstream 195561 9918929 ~ 9981569 (+)
G188527 NA non-coding downstream 47895 10228497 ~ 10229131 (+)
G188622 NA non-coding downstream 120566 10301168 ~ 10301380 (+)
G188623 NA non-coding downstream 121843 10302445 ~ 10302703 (+)
G188632 NA non-coding downstream 126784 10307386 ~ 10311022 (+)
G188639 NA non-coding downstream 142821 10323423 ~ 10323628 (+)
LOC111195371 NA other upstream 70600 10101755 ~ 10106530 (+)
G188325 NA other upstream 320135 9854307 ~ 9856995 (+)
LOC103032765 igsf21,igsf21a,LOC108438574,LOC107749415,LOC107727841,LOC107685626 other upstream 357175 9283795 ~ 9819955 (+)
agtrap agtrap other upstream 1905418 8256796 ~ 8271712 (+)
LOC111195452 NA other upstream 2063888 8112003 ~ 8113242 (+)
G188624 NA other downstream 122758 10303360 ~ 10303665 (+)
G188771 NA other downstream 667469 10848071 ~ 10852736 (+)
G188923 lrig1,LOC107557776,LOC107753782,LOC107600281 other downstream 909126 11089728 ~ 11090047 (+)
G188968 suclg2,LOC107753779,LOC107656059,LOC107729402,LOC107699794 other downstream 1270777 11451379 ~ 11464480 (+)
fam19a1 fam19a1,LOC108280984,LOC107729407,LOC106583036,LOC105017301,LOC107600286 other downstream 1510270 11690872 ~ 12000663 (+)

Expression


Co-expression Network