G73254


Basic Information

Item Value
gene id G73254
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 7344595 ~ 7344915 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU83518
ATCAATCTAGCCGCCACTATATTTTGCGGTTCGCGCATACACTGGCTATTACGGTAAGACCAGGGGCGATTCTAGGGTCAGAGCTTTAGGGGTGCTGAGCACCCAATGAGCCCCACTGCCACCACCCACCCTCTTTTCACACAAAAACAAAAAATATGTTACAAAAAGTAAATGTAATATAGGCTACTTAATGCCAATAAGTTAGTATAGGAGTATGAGTAGTTACTGTTTTGCTTGCCACTATTCACTATATGTCAATTTATTGTTGTTGTTTCCTCACCTGGTTCTTCCTGCATGCTCTCCCTTTCCCTTTCTCCTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83518 True 321 lncRNA 0.43 1 7344595 7344915

Neighbor

gene id symbol gene type direction distance location
CI01000012_07312430_07315865 BTBD6A coding upstream 28678 7311672 ~ 7315917 (+)
CI01000012_07136101_07161117 RRBP1A, RRBP1 coding upstream 183047 7136017 ~ 7161548 (+)
CI01000012_07120539_07126148 SNX5 coding upstream 218323 7120539 ~ 7126272 (+)
CI01000012_07111569_07113225 NA coding upstream 231363 7111569 ~ 7113232 (+)
CI01000012_07108281_07109521 NA coding upstream 234673 7108281 ~ 7109922 (+)
CI01000012_07348648_07352865 NA coding downstream 3733 7348648 ~ 7353209 (+)
CI01000012_07359292_07362314 NA coding downstream 13800 7358715 ~ 7362378 (+)
CI01000012_07401962_07405598 NUSAP1 coding downstream 57047 7401962 ~ 7405598 (+)
CI01000012_07409605_07427042 RTF1 coding downstream 64077 7408992 ~ 7427309 (+)
CI01000012_07429147_07434790 GOLGA5 coding downstream 84232 7429147 ~ 7434846 (+)
G73253 NA non-coding upstream 5620 7338770 ~ 7338975 (+)
G73224 NA non-coding upstream 83530 7260860 ~ 7261065 (+)
G73223 NA non-coding upstream 84557 7259826 ~ 7260038 (+)
G73150 NA non-coding upstream 113152 7231186 ~ 7231443 (+)
G72757 NA non-coding upstream 256974 7074666 ~ 7087621 (+)
G73181 NA non-coding downstream 591 7345506 ~ 7345781 (+)
G73255 NA non-coding downstream 2735 7347650 ~ 7347902 (+)
G73257 NA non-coding downstream 27157 7372072 ~ 7372408 (+)
G73258 NA non-coding downstream 27674 7372589 ~ 7372814 (+)
G73162 NA non-coding downstream 50453 7395368 ~ 7400277 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 1420290 5922385 ~ 5929186 (+)
G71623 NA other upstream 1527990 5813517 ~ 5816605 (+)
G71548 NA other upstream 1783162 5550493 ~ 5561433 (+)
G71221 NA other upstream 1804139 5538525 ~ 5540456 (+)
G71218 NA other upstream 1806211 5535852 ~ 5538384 (+)
CI01000012_07806089_07811902 BEND3 other downstream 461188 7805248 ~ 7811902 (+)
G73578 NA other downstream 1021891 8366806 ~ 8367627 (+)
CI01000012_10223957_10235955 NA other downstream 2877040 10223697 ~ 10236276 (+)
G75533 NA other downstream 3799902 11144817 ~ 11145739 (+)
G76385 NA other downstream 5285840 12630755 ~ 12675666 (+)

Expression


Co-expression Network