trnaq-uug_4


Basic Information

Item Value
gene id trnaq-uug_4
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035918.1
NCBI id CM008321.1
chromosome length 32506130
location 7192154 ~ 7192226 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnaq-uug_4
GGTCCCATGGTGTAATGGTTAATCACTCTGGACTTTGACTCCAGCGATCCGAGTTCGAATCTCGGTGGGACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaq-uug_4 True 73 tRNA 0.52 1 7192154 7192226

Neighbor

gene id symbol gene type direction distance location
LOC103038368 NA coding upstream 53116 7128165 ~ 7139038 (+)
LOC103039610 NA coding upstream 190142 6990940 ~ 7002012 (+)
LOC103040557 yod1 coding upstream 204190 6983613 ~ 6987964 (+)
LOC103041362 etnk2,LOC106565623,LOC106583121,LOC103370992 coding upstream 308739 6852509 ~ 6883415 (+)
LOC103041666 slc41a1,LOC107698497,LOC107654373,LOC108254937 coding upstream 390685 6758208 ~ 6801469 (+)
LOC103037733 LOC108438636 coding downstream 15092 7207318 ~ 7210200 (+)
acot8 acot8,LOC107730625,LOC107670930,LOC107722006 coding downstream 154717 7346943 ~ 7353286 (+)
LOC103037081 srsf6,LOC107654800 coding downstream 162009 7354235 ~ 7360534 (+)
ift52 ift52 coding downstream 170337 7362563 ~ 7375037 (+)
mybl2 mybl2 coding downstream 187531 7379757 ~ 7393057 (+)
G187848 NA non-coding upstream 2228 7189032 ~ 7189926 (+)
G187845 NA non-coding upstream 21504 7170414 ~ 7170650 (+)
G187844 NA non-coding upstream 27387 7164494 ~ 7164767 (+)
G187810 sh2d5 non-coding upstream 141816 7033140 ~ 7050338 (+)
G187743 snrpe non-coding upstream 209400 6978863 ~ 6982754 (+)
G187900 NA non-coding downstream 132459 7324685 ~ 7325351 (+)
G187904 NA non-coding downstream 184925 7377151 ~ 7378588 (+)
G188009 NA non-coding downstream 808608 8000834 ~ 8001377 (+)
G188051 NA non-coding downstream 857412 8049638 ~ 8050112 (+)
G188062 NA non-coding downstream 928104 8120330 ~ 8120628 (+)
LOC103029365 NA other upstream 93482 7077165 ~ 7098672 (+)
p3h1 NA other upstream 1393175 5779891 ~ 5798979 (+)
G186978 rps23,rs23,LOC106566095,LOC106566598 other upstream 3797311 3392387 ~ 3394843 (+)
G186880 lmcd1 other upstream 4190139 2980497 ~ 3002015 (+)
podxl2 NA other upstream 6096817 606833 ~ 1095337 (+)
LOC111195452 NA other downstream 919777 8112003 ~ 8113242 (+)
agtrap agtrap other downstream 1064570 8256796 ~ 8271712 (+)
LOC103032765 igsf21,igsf21a,LOC108438574,LOC107749415,LOC107727841,LOC107685626 other downstream 2091569 9283795 ~ 9819955 (+)
G188325 NA other downstream 2662081 9854307 ~ 9856995 (+)
LOC111195371 NA other downstream 2909529 10101755 ~ 10106530 (+)

Expression


Co-expression Network