Gene
RNA
| Item | Value |
|---|---|
| gene id | G73162 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 7395368 ~ 7400277 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Fanconi anemia group I protein isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU83418 | False | 3853 | lncRNA | 0.36 | 3 | 7395368 | 7400277 |
| TU83419 | True | 3009 | lncRNA | 0.38 | 3 | 7395368 | 7399433 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_07359292_07362314 | NA | coding | upstream | 32990 | 7358715 ~ 7362378 (+) |
| CI01000012_07348648_07352865 | NA | coding | upstream | 42159 | 7348648 ~ 7353209 (+) |
| CI01000012_07312430_07315865 | BTBD6A | coding | upstream | 79451 | 7311672 ~ 7315917 (+) |
| CI01000012_07136101_07161117 | RRBP1A, RRBP1 | coding | upstream | 233820 | 7136017 ~ 7161548 (+) |
| CI01000012_07120539_07126148 | SNX5 | coding | upstream | 269096 | 7120539 ~ 7126272 (+) |
| CI01000012_07401962_07405598 | NUSAP1 | coding | downstream | 1685 | 7401962 ~ 7405598 (+) |
| CI01000012_07409605_07427042 | RTF1 | coding | downstream | 8715 | 7408992 ~ 7427309 (+) |
| CI01000012_07429147_07434790 | GOLGA5 | coding | downstream | 28870 | 7429147 ~ 7434846 (+) |
| CI01000012_07441851_07459661 | TRIP11 | coding | downstream | 41574 | 7441851 ~ 7459786 (+) |
| CI01000012_07464278_07478699 | FBLN5 | coding | downstream | 64001 | 7464278 ~ 7478992 (+) |
| G73258 | NA | non-coding | upstream | 22554 | 7372589 ~ 7372814 (+) |
| G73257 | NA | non-coding | upstream | 22960 | 7372072 ~ 7372408 (+) |
| G73255 | NA | non-coding | upstream | 47466 | 7347650 ~ 7347902 (+) |
| G73181 | NA | non-coding | upstream | 49587 | 7345506 ~ 7345781 (+) |
| G73254 | NA | non-coding | upstream | 50453 | 7344595 ~ 7344915 (+) |
| G73262 | NA | non-coding | downstream | 20416 | 7420693 ~ 7421889 (+) |
| G73175 | NA | non-coding | downstream | 307398 | 7707675 ~ 7715446 (+) |
| G73321 | NA | non-coding | downstream | 334019 | 7734296 ~ 7734698 (+) |
| G73346 | NA | non-coding | downstream | 401644 | 7801921 ~ 7802123 (+) |
| G73359 | NA | non-coding | downstream | 455066 | 7855343 ~ 7855654 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | other | upstream | 1471063 | 5922385 ~ 5929186 (+) |
| G71623 | NA | other | upstream | 1578763 | 5813517 ~ 5816605 (+) |
| G71548 | NA | other | upstream | 1833935 | 5550493 ~ 5561433 (+) |
| G71221 | NA | other | upstream | 1854912 | 5538525 ~ 5540456 (+) |
| G71218 | NA | other | upstream | 1856984 | 5535852 ~ 5538384 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | downstream | 405826 | 7805248 ~ 7811902 (+) |
| G73578 | NA | other | downstream | 966529 | 8366806 ~ 8367627 (+) |
| CI01000012_10223957_10235955 | NA | other | downstream | 2821678 | 10223697 ~ 10236276 (+) |
| G75533 | NA | other | downstream | 3744540 | 11144817 ~ 11145739 (+) |
| G76385 | NA | other | downstream | 5230478 | 12630755 ~ 12675666 (+) |
