Gene
RNA
| Item | Value |
|---|---|
| gene id | G74556 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 8070476 ~ 8070696 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| tropomyosin alpha-1 chain isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU85041 | True | 221 | lncRNA | 0.50 | 1 | 8070476 | 8070696 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_07956050_07959414 | NA | coding | downstream | 111062 | 7955987 ~ 7959414 (-) |
| CI01000012_07938822_07940632 | NA | coding | downstream | 129431 | 7938814 ~ 7941045 (-) |
| CI01000012_07930029_07934648 | 5NT1A, NT5C1BA | coding | downstream | 135595 | 7929292 ~ 7934881 (-) |
| CI01000012_07925520_07928491 | RDH14, RDH14A | coding | downstream | 141985 | 7925456 ~ 7928491 (-) |
| CI01000012_07813654_07814853 | NA | coding | downstream | 255623 | 7812900 ~ 7814853 (-) |
| CI01000012_08156754_08159438 | OSR1 | coding | upstream | 85373 | 8156069 ~ 8159438 (-) |
| CI01000012_08247043_08252830 | NA | coding | upstream | 175721 | 8246417 ~ 8252958 (-) |
| CI01000012_08376626_08388293 | HIF1AA | coding | upstream | 305922 | 8376618 ~ 8388293 (-) |
| CI01000012_08399430_08416750 | PRKCHA | coding | upstream | 327070 | 8397766 ~ 8417291 (-) |
| CI01000012_08423495_08432094 | SLC38A6 | coding | upstream | 352108 | 8422804 ~ 8432094 (-) |
| G74553 | NA | non-coding | downstream | 13082 | 8057167 ~ 8057394 (-) |
| G74548 | NA | non-coding | downstream | 19750 | 8050514 ~ 8050726 (-) |
| G74547 | NA | non-coding | downstream | 22948 | 8047308 ~ 8047528 (-) |
| G74546 | NA | non-coding | downstream | 24732 | 8045524 ~ 8045744 (-) |
| G74508 | NA | non-coding | downstream | 133038 | 7937202 ~ 7937438 (-) |
| G74557 | NA | non-coding | upstream | 599 | 8071295 ~ 8071570 (-) |
| G74558 | NA | non-coding | upstream | 1599 | 8072295 ~ 8072675 (-) |
| G74560 | NA | non-coding | upstream | 3317 | 8074013 ~ 8074250 (-) |
| G74565 | NA | non-coding | upstream | 8779 | 8079475 ~ 8079697 (-) |
| G74568 | NA | non-coding | upstream | 15800 | 8086496 ~ 8086730 (-) |
| CI01000012_07356934_07358497 | NA | other | downstream | 711931 | 7356863 ~ 7358612 (-) |
| G72629 | NA | other | downstream | 1922982 | 6147011 ~ 6147494 (-) |
| G72294 | NA | other | downstream | 2604619 | 5462840 ~ 5465857 (-) |
| CI01000012_05414096_05416676 | TTC9 | other | downstream | 2653696 | 5413369 ~ 5416780 (-) |
| G72204 | NA | other | downstream | 2768270 | 5293773 ~ 5302206 (-) |
| G74648 | NA | other | upstream | 193633 | 8264329 ~ 8265654 (-) |
| G74701 | NA | other | upstream | 296323 | 8367019 ~ 8367643 (-) |
| CI01000012_09068458_09070536 | NA | other | upstream | 997210 | 9067906 ~ 9070765 (-) |
| CI01000012_09071892_09073410 | NA | other | upstream | 1000675 | 9071371 ~ 9073457 (-) |
| CI01000012_09082056_09083285 | NA | other | upstream | 1012040 | 9081877 ~ 9083489 (-) |
