G227284


Basic Information

Item Value
gene id G227284
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019170641.1
NCBI id APWO02000239.1
chromosome length 236985
location 56844 ~ 60624 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU308749
CGGTCATGGGCCTGGTCGCTGTGCACCTGGTCACTCTCAGCTGAGCATGCACTGTCTGCACTCAGCTCCTCTTCTTCCTGATCCGTTTCCACAGCCTCACAAAGTCCCTTCACATCAAACTCCCCGGCAGCAGTGGAGAGAGCAGTGCTGTTGGCTGGATAGAGGATATAGTCGTTGTTTTCTGAAGAGCTGAGCAACTGCAAATCTGTTTCCTGAagcacagaactgaactgttcagACACCTGCTCAATATCATCAGGCTCTTCAACATcaccctcttcttcttcttcacctaGAAGACTGTCCAGACTCTGAGGATGAAAGTCTACATCTTCATGTTCTTCACAGTCATACTCATCTTCCTCCTCTGCTCTACtgggagtgtgggagagaggcAGCTGAAGGCTCCACTTCTCTAACAGTGACCGAACAGCCAGTGGATCAGCACGCAAAGCCCAGCGCCCCTGTGGCTGGTACTGAGTGACACTAGGTCCAGTGGGATTggtactgctgctgctaactccaGCACCCTgcatacacagagacacagagggaATGTTGGAAGTGGAA

Function

GO:

id name namespace
GO:0030261 chromosome condensation biological_process
GO:0007076 mitotic chromosome condensation biological_process

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU308749 True 570 lncRNA 0.52 3 56844 60624

Neighbor

gene id symbol gene type direction distance location
G227260 NA non-coding downstream 21557 34811 ~ 35287 (-)
G227257 NA non-coding downstream 30946 25487 ~ 25898 (-)
G227313 NA non-coding upstream 110822 171446 ~ 172118 (-)
G227315 NA non-coding upstream 122627 183251 ~ 183669 (-)
LOC103034738 NA other downstream 15853 39005 ~ 40991 (-)

Expression


Co-expression Network