G73585


Basic Information

Item Value
gene id G73585
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 8386287 ~ 8391810 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU83922
TTCAGTAGTTTACGCAGACGCAGGTAACTGAGTGCGAGTCTCATAACTGATGCTTTATCCAGGTTAGAGGTGGTGCTGTGGGGAAGGGGCAGTTCTCTGGCCAGTTCATAAAACACCTCTGATTCTTTTCCTCTCCGACAACGTGCTGCATCTCGGGATTTCTCCTTCCTTCGCTCTGAACTCACCCTTTTTTTTTCCAGGTGCGACTGAATCCATGGTCAACCGGGACTCCAACGCACAAAAACCTTCGCTAAATCCCTTGTTCACTCGAATTATGTCCAGTCCTAAATGTGTGCTATACAGTAAGCCCAGCAAGAGTTCCAGTGTTCGAGTGATAAAGTTGAATTAAGTTGAAGTGATGCTTCGCCTTTCCTCTCTCGCTTTCTCCGCATCTGCCTGACGGGTCGCGTGGGCGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83922 True 417 lncRNA 0.49 2 8386287 8391810

Neighbor

gene id symbol gene type direction distance location
CI01000012_08353036_08355661 NA coding upstream 28872 8350829 ~ 8357504 (+)
CI01000012_08312903_08334243 SYT14A, SYT14 coding upstream 51431 8312903 ~ 8334856 (+)
CI01000012_08307719_08308987 NA coding upstream 77066 8307719 ~ 8309221 (+)
CI01000012_08264407_08270366 DIEXF coding upstream 115459 8264002 ~ 8270828 (+)
CI01000012_08234924_08239665 NA coding upstream 146402 8234759 ~ 8239885 (+)
CI01000012_08433577_08437269 TRMT5 coding downstream 41767 8433577 ~ 8437972 (+)
CI01000012_08464015_08470633 NA coding downstream 72205 8464015 ~ 8470764 (+)
CI01000012_08479030_08480715 MGC130961, SIX1B, SIX1, SIX2, SIX1A coding downstream 85306 8477116 ~ 8481200 (+)
CI01000012_08526824_08531821 DHRS7 coding downstream 135014 8526824 ~ 8532163 (+)
CI01000012_08574591_08601981 RTN1, RTN1A coding downstream 182781 8574591 ~ 8601998 (+)
G73583 NA non-coding upstream 12055 8374027 ~ 8374232 (+)
G73579 NA non-coding upstream 17276 8368622 ~ 8369011 (+)
G73576 NA non-coding upstream 20362 8365603 ~ 8365925 (+)
G73571 NA non-coding upstream 108704 8277395 ~ 8277583 (+)
G73591 NA non-coding downstream 1771 8393581 ~ 8393812 (+)
G73592 NA non-coding downstream 3256 8395066 ~ 8395284 (+)
G73593 NA non-coding downstream 4594 8396404 ~ 8396736 (+)
G73594 NA non-coding downstream 21076 8412886 ~ 8413258 (+)
G73595 NA non-coding downstream 26376 8418186 ~ 8418418 (+)
G73578 NA other upstream 18660 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 578432 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 2461982 5922385 ~ 5929186 (+)
G71623 NA other upstream 2569682 5813517 ~ 5816605 (+)
G71548 NA other upstream 2824854 5550493 ~ 5561433 (+)
CI01000012_10223957_10235955 NA other downstream 1830145 10223697 ~ 10236276 (+)
G75533 NA other downstream 2753007 11144817 ~ 11145739 (+)
G76385 NA other downstream 4238945 12630755 ~ 12675666 (+)
G76374 NA other downstream 4353721 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 4623696 13029435 ~ 13038899 (+)

Expression


Co-expression Network