G73593


Basic Information

Item Value
gene id G73593
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 8396404 ~ 8396736 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU83930
AGCAATGCGTTTGTTTAAAAAAAACAAAAACAAAAAAAAACACATATTTAACAAGTTCTGAAGTAAAATATCTAGATTCTGCCAGGCCGCTTTCCGTATTCAATTTATGAAGAAAGTGTAAACTGGCGTCGCGTCAGTTAAGCTTTTTCCGTAAGTTGAATAGGGAAGGCATAGGACGTAGCGTAAGCTTTTTGAACTGCGAGAGCTTTACACTTTCTTCAGAAGGATTTCTGGTGGAAGCTTGATATTTTAATTCACACCTTGTTAAATATAGATATTTTTATACAAACACATCGTTTCGCTTTAGAAGGCCTTTATTAACCCCCGGAGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83930 True 333 lncRNA 0.36 1 8396404 8396736

Neighbor

gene id symbol gene type direction distance location
CI01000012_08353036_08355661 NA coding upstream 38989 8350829 ~ 8357504 (+)
CI01000012_08312903_08334243 SYT14A, SYT14 coding upstream 61548 8312903 ~ 8334856 (+)
CI01000012_08307719_08308987 NA coding upstream 87183 8307719 ~ 8309221 (+)
CI01000012_08264407_08270366 DIEXF coding upstream 125576 8264002 ~ 8270828 (+)
CI01000012_08234924_08239665 NA coding upstream 156519 8234759 ~ 8239885 (+)
CI01000012_08433577_08437269 TRMT5 coding downstream 36841 8433577 ~ 8437972 (+)
CI01000012_08464015_08470633 NA coding downstream 67279 8464015 ~ 8470764 (+)
CI01000012_08479030_08480715 MGC130961, SIX1B, SIX1, SIX2, SIX1A coding downstream 80380 8477116 ~ 8481200 (+)
CI01000012_08526824_08531821 DHRS7 coding downstream 130088 8526824 ~ 8532163 (+)
CI01000012_08574591_08601981 RTN1, RTN1A coding downstream 177855 8574591 ~ 8601998 (+)
G73592 NA non-coding upstream 1120 8395066 ~ 8395284 (+)
G73591 NA non-coding upstream 2592 8393581 ~ 8393812 (+)
G73585 NA non-coding upstream 4594 8386287 ~ 8391810 (+)
G73583 NA non-coding upstream 22172 8374027 ~ 8374232 (+)
G73579 NA non-coding upstream 27393 8368622 ~ 8369011 (+)
G73594 NA non-coding downstream 16150 8412886 ~ 8413258 (+)
G73595 NA non-coding downstream 21450 8418186 ~ 8418418 (+)
G73611 NA non-coding downstream 23981 8420717 ~ 8421576 (+)
G73607 NA non-coding downstream 75804 8472540 ~ 8473285 (+)
G73637 NA non-coding downstream 99310 8496046 ~ 8496340 (+)
G73578 NA other upstream 28777 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 588549 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 2472099 5922385 ~ 5929186 (+)
G71623 NA other upstream 2579799 5813517 ~ 5816605 (+)
G71548 NA other upstream 2834971 5550493 ~ 5561433 (+)
CI01000012_10223957_10235955 NA other downstream 1825219 10223697 ~ 10236276 (+)
G75533 NA other downstream 2748081 11144817 ~ 11145739 (+)
G76385 NA other downstream 4234019 12630755 ~ 12675666 (+)
G76374 NA other downstream 4348795 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 4618770 13029435 ~ 13038899 (+)

Expression


Co-expression Network