G73643


Basic Information

Item Value
gene id G73643
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 8502728 ~ 8502951 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU83991
TCCAAAGTAAAAAGCAGAAGCACTGTTGAGAATTATTCCCAGAAGGCAAATTAAATATCCTTTGACTATATGAAAACATTTTCTAAAAATTCACATTTAAAGTTGCTGAATTGAAGGTGAAGGTTCAGCCACTCTTATCTAGCAGTCTTTGCTCTGTGAATCTAGATCCGTTAAAGTCACAACCCATAGTAATTGCCGACCTGTTCTTTTGAATTCAAATTTTA

Function

NR:

description
PREDICTED: estradiol 17-beta-dehydrogenase 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83991 True 224 lncRNA 0.34 1 8502728 8502951

Neighbor

gene id symbol gene type direction distance location
CI01000012_08479030_08480715 MGC130961, SIX1B, SIX1, SIX2, SIX1A coding upstream 21528 8477116 ~ 8481200 (+)
CI01000012_08464015_08470633 NA coding upstream 31964 8464015 ~ 8470764 (+)
CI01000012_08433577_08437269 TRMT5 coding upstream 64756 8433577 ~ 8437972 (+)
CI01000012_08353036_08355661 NA coding upstream 145313 8350829 ~ 8357504 (+)
CI01000012_08312903_08334243 SYT14A, SYT14 coding upstream 167872 8312903 ~ 8334856 (+)
CI01000012_08526824_08531821 DHRS7 coding downstream 23873 8526824 ~ 8532163 (+)
CI01000012_08574591_08601981 RTN1, RTN1A coding downstream 71640 8574591 ~ 8601998 (+)
CI01000012_08629488_08631884 PGAM1A, PGAM1B, MGC82549, PGM, PGAM1 coding downstream 126267 8629218 ~ 8631999 (+)
CI01000012_08635778_08639992 ZDHHC16 coding downstream 132827 8635778 ~ 8640568 (+)
CI01000012_08643992_08646512 UBTD1, UBTD1A, UBTD1B coding downstream 141041 8643992 ~ 8646542 (+)
G73642 NA non-coding upstream 167 8502349 ~ 8502561 (+)
G73637 NA non-coding upstream 6388 8496046 ~ 8496340 (+)
G73607 NA non-coding upstream 29443 8472540 ~ 8473285 (+)
G73611 NA non-coding upstream 81152 8420717 ~ 8421576 (+)
G73595 NA non-coding upstream 84310 8418186 ~ 8418418 (+)
G73644 NA non-coding downstream 2693 8505644 ~ 8505856 (+)
G73646 NA non-coding downstream 3174 8506125 ~ 8506533 (+)
G73645 NA non-coding downstream 3823 8506774 ~ 8510019 (+)
G73647 NA non-coding downstream 7803 8510754 ~ 8511047 (+)
G73648 NA non-coding downstream 9411 8512362 ~ 8512670 (+)
G73578 NA other upstream 135101 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 694873 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 2578423 5922385 ~ 5929186 (+)
G71623 NA other upstream 2686123 5813517 ~ 5816605 (+)
G71548 NA other upstream 2941295 5550493 ~ 5561433 (+)
CI01000012_10223957_10235955 NA other downstream 1719004 10223697 ~ 10236276 (+)
G75533 NA other downstream 2641866 11144817 ~ 11145739 (+)
G76385 NA other downstream 4127804 12630755 ~ 12675666 (+)
G76374 NA other downstream 4242580 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 4512555 13029435 ~ 13038899 (+)

Expression


Co-expression Network