Gene
RNA
| Item | Value |
|---|---|
| gene id | G73701 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 8700211 ~ 8700508 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU84062 | True | 206 | lncRNA | 0.45 | 2 | 8700211 | 8700508 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_08656797_08670009 | RRP12 | coding | upstream | 29969 | 8656323 ~ 8670242 (+) |
| CI01000012_08643992_08646512 | UBTD1, UBTD1A, UBTD1B | coding | upstream | 53669 | 8643992 ~ 8646542 (+) |
| CI01000012_08635778_08639992 | ZDHHC16 | coding | upstream | 59643 | 8635778 ~ 8640568 (+) |
| CI01000012_08629488_08631884 | PGAM1A, PGAM1B, MGC82549, PGM, PGAM1 | coding | upstream | 68212 | 8629218 ~ 8631999 (+) |
| CI01000012_08574591_08601981 | RTN1, RTN1A | coding | upstream | 98213 | 8574591 ~ 8601998 (+) |
| CI01000012_08706061_08708565 | PRDM8 | coding | downstream | 5408 | 8705916 ~ 8709256 (+) |
| CI01000012_08787836_08798682 | MAPK8B, MAPK8A, MAPK8 | coding | downstream | 87328 | 8787836 ~ 8798682 (+) |
| CI01000012_08852654_08899169 | WDFY4 | coding | downstream | 152146 | 8852654 ~ 8899169 (+) |
| CI01000012_08926039_08935452 | NA | coding | downstream | 224540 | 8925048 ~ 8935861 (+) |
| CI01000012_09059209_09062816 | TMEM72 | coding | downstream | 358701 | 9059209 ~ 9062938 (+) |
| G73686 | NA | non-coding | upstream | 48761 | 8651209 ~ 8651450 (+) |
| G73684 | NA | non-coding | upstream | 51374 | 8648604 ~ 8648837 (+) |
| G73671 | NA | non-coding | upstream | 139622 | 8560372 ~ 8560589 (+) |
| G73668 | NA | non-coding | upstream | 150190 | 8549747 ~ 8550021 (+) |
| G73600 | NA | non-coding | upstream | 181591 | 8514685 ~ 8518620 (+) |
| G73743 | NA | non-coding | downstream | 44629 | 8745137 ~ 8746687 (+) |
| G73744 | NA | non-coding | downstream | 48134 | 8748642 ~ 8749055 (+) |
| G73750 | NA | non-coding | downstream | 55614 | 8756122 ~ 8756791 (+) |
| G73752 | NA | non-coding | downstream | 59063 | 8759571 ~ 8759914 (+) |
| G73753 | NA | non-coding | downstream | 59831 | 8760339 ~ 8760560 (+) |
| G73578 | NA | other | upstream | 332584 | 8366806 ~ 8367627 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | upstream | 892356 | 7805248 ~ 7811902 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | other | upstream | 2775906 | 5922385 ~ 5929186 (+) |
| G71623 | NA | other | upstream | 2883606 | 5813517 ~ 5816605 (+) |
| G71548 | NA | other | upstream | 3138778 | 5550493 ~ 5561433 (+) |
| CI01000012_10223957_10235955 | NA | other | downstream | 1521447 | 10223697 ~ 10236276 (+) |
| G75533 | NA | other | downstream | 2444309 | 11144817 ~ 11145739 (+) |
| G76385 | NA | other | downstream | 3930247 | 12630755 ~ 12675666 (+) |
| G76374 | NA | other | downstream | 4045023 | 12745531 ~ 12749169 (+) |
| CI01000012_13029637_13033226 | RGS17 | other | downstream | 4314998 | 13029435 ~ 13038899 (+) |
